Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_B11
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030125-1|ABN49264.1| 1429|Drosophila melanogaster IP14232p pro...    31   2.0  
AE014297-1348|ABI31163.1| 1137|Drosophila melanogaster CG14713-P...    31   2.0  
D84312-1|BAA21705.1|  205|Drosophila melanogaster rab1 protein.        30   2.6  
AE014297-2965|AAF55873.1|  205|Drosophila melanogaster CG3320-PA...    30   2.6  

>BT030125-1|ABN49264.1| 1429|Drosophila melanogaster IP14232p
           protein.
          Length = 1429

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -3

Query: 689 TNQXIDSSTQNYNVRDENTDNMNEMMKSTTE 597
           T +    +TQ  N+RD+N DN N+++ +TT+
Sbjct: 657 TTEIAMKATQISNIRDDNDDNSNDVIVATTK 687


>AE014297-1348|ABI31163.1| 1137|Drosophila melanogaster CG14713-PB
           protein.
          Length = 1137

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -3

Query: 689 TNQXIDSSTQNYNVRDENTDNMNEMMKSTTE 597
           T +    +TQ  N+RD+N DN N+++ +TT+
Sbjct: 657 TTEIAMKATQISNIRDDNDDNSNDVIVATTK 687


>D84312-1|BAA21705.1|  205|Drosophila melanogaster rab1 protein.
          Length = 205

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -3

Query: 566 CEFFKKLF-GNKTTGTTNVIAEHITAGEHENESNIP 462
           CE   KL  GNK+  TT  + +H TA E+  +  IP
Sbjct: 114 CENVNKLLVGNKSDLTTKKVVDHTTAAEYAAQLGIP 149


>AE014297-2965|AAF55873.1|  205|Drosophila melanogaster CG3320-PA,
           isoform A protein.
          Length = 205

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -3

Query: 566 CEFFKKLF-GNKTTGTTNVIAEHITAGEHENESNIP 462
           CE   KL  GNK+  TT  + +H TA E+  +  IP
Sbjct: 114 CENVNKLLVGNKSDLTTKKVVDHTTAAEYAAQLGIP 149


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,438,148
Number of Sequences: 53049
Number of extensions: 623238
Number of successful extensions: 1409
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)