Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_B11
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   3.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   3.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.5  

>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 450 NCENRYIRFILVFTGRYMFCDY 515
           NC+N      L+   RY+FC+Y
Sbjct: 34  NCKNYDHPTTLLKLKRYLFCEY 55


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -2

Query: 462 GFRNYIGMFISSRFYVVRFCRMP*IKRDLSIW 367
           G RNY+  F+S  +   R    P  + +++ W
Sbjct: 335 GIRNYLTKFVSEYWMETRGFLQPVCQNEMNKW 366


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +3

Query: 498 YMFCDYICCTSGFVS 542
           ++ CD +CCT+  ++
Sbjct: 112 WLTCDVLCCTASILN 126


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +3

Query: 498 YMFCDYICCTSGFVS 542
           ++ CD +CCT+  ++
Sbjct: 112 WLTCDVLCCTASILN 126


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +3

Query: 498 YMFCDYICCTSGFVS 542
           ++ CD +CCT+  ++
Sbjct: 112 WLTCDVLCCTASILN 126


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 568  HSNILSNGSCSVVLFII 618
            H N  S+G C ++ F++
Sbjct: 1480 HLNAWSDGGCPMIYFVV 1496


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,214
Number of Sequences: 438
Number of extensions: 4073
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)