Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_B10
         (505 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...    91   4e-19
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...    88   4e-18
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    31   0.47 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    31   0.63 
Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z93397-6|CAB07718.2|  550|Caenorhabditis elegans Hypothetical pr...    28   4.4  
U40939-1|AAA81700.1|  186|Caenorhabditis elegans Hypothetical pr...    27   5.8  
AF039049-1|AAB94253.1|  299|Caenorhabditis elegans Serpentine re...    27   7.7  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score = 91.1 bits (216), Expect = 4e-19
 Identities = 38/69 (55%), Positives = 49/69 (71%)
 Frame = -2

Query: 294 TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 115
           TKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGYP AK R+Y+W  K+        
Sbjct: 2   TKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGT 61

Query: 114 XRMRHLKIV 88
            R RHL+ V
Sbjct: 62  GRTRHLRDV 70


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score = 87.8 bits (208), Expect = 4e-18
 Identities = 37/69 (53%), Positives = 48/69 (69%)
 Frame = -2

Query: 294 TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 115
           TKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGY  AK R+Y+W  K+        
Sbjct: 2   TKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGT 61

Query: 114 XRMRHLKIV 88
            R RHL+ V
Sbjct: 62  GRTRHLRDV 70


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 31.1 bits (67), Expect = 0.47
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 279 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 172
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 93  TYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 30.7 bits (66), Expect = 0.63
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 279 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 172
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 165 TYNKNNFSTHHFCNKCGKVAQN--SKKCKYCGGPVA 198


>Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical
           protein C17H1.9 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -3

Query: 266 AEIRPIRYAEDVVDRH---ITFKNQNAPNVDILQQNYDP 159
           A+++ I+Y  D +++H   + F+NQ   +   L+ N DP
Sbjct: 230 ADLKKIKYTSDEIEKHKSKLEFRNQQLESSRTLEINADP 268


>Z93397-6|CAB07718.2|  550|Caenorhabditis elegans Hypothetical
           protein ZC482.4 protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 16/68 (23%), Positives = 30/68 (44%)
 Frame = +3

Query: 147 LTSGRIVILLQDIHIGRILIFECDMTIYHIFCITYGSYFGAYRSLRYPSSEIDIAG*DML 326
           +T G  + ++QD H       ECD+  Y ++     +Y G      Y + +ID+      
Sbjct: 429 VTGGERIAIIQDNHPDLFKSRECDLFPY-LYTFVNLTYIGGNCGRSYQNEDIDVYNGQEY 487

Query: 327 S*IYFTNI 350
           + + F N+
Sbjct: 488 TLVNFENL 495


>U40939-1|AAA81700.1|  186|Caenorhabditis elegans Hypothetical
           protein F13D11.3 protein.
          Length = 186

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 38  WAALVSLL*NHYGSASXTIFK*RM-RPVPVVFLRLAFT 148
           W  ++       G+AS  +   RM RPVP V+LR  +T
Sbjct: 137 WRQMIDFEKQRNGNASVELISGRMARPVPSVYLRRVYT 174


>AF039049-1|AAB94253.1|  299|Caenorhabditis elegans Serpentine
           receptor, class x protein68 protein.
          Length = 299

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +3

Query: 186 HIGRILIFECDMTIYHIFCITYGSYFGAYRSLRYPS 293
           H G +++F  +++++  F I+   +F  +  L+Y S
Sbjct: 77  HCGFVILFCYELSVFTHFAISINRFFAVWMPLKYES 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,547,215
Number of Sequences: 27780
Number of extensions: 199842
Number of successful extensions: 425
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)