Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_B04
(629 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 44 5e-06
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 33 0.007
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 30 0.070
AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein. 26 0.86
AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein. 26 0.86
AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein. 26 0.86
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 26 0.86
AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein. 25 1.5
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 24 3.5
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 24 4.6
AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein. 24 4.6
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 6.1
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 43.6 bits (98), Expect = 5e-06
Identities = 21/93 (22%), Positives = 53/93 (56%)
Frame = -3
Query: 627 NRMCKVLEXRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRV 448
N KVL+ + +++D+L+ + + + + ++ + K+ +EDE+E A+ +
Sbjct: 892 NSKVKVLQTKINGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAI 951
Query: 447 KSGDAKISELEEELKVVGNSLKSLEVSEEKANQ 349
+ G+ + ++LEEE + L+ ++++ EKA++
Sbjct: 952 RKGNDERTQLEEEANKLREELEEMKLAIEKAHE 984
Score = 25.4 bits (53), Expect = 1.5
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -3
Query: 510 DEVS--RKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVS-EEKANQRVE 340
DEV+ RKL + E E ++ A++ LEE L V L++ + +E AN+ E
Sbjct: 500 DEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANEERE 559
Score = 23.4 bits (48), Expect = 6.1
Identities = 14/97 (14%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = -3
Query: 456 DRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEEFXXXXXXXXXXXKXXXXXXX 277
++V++ +AK++E ++ +++ + ++ +++ E
Sbjct: 850 EKVRALEAKVAECKQAFDSSSTKADAMQKNVDRYTEQINEITNSKVKVLQTKINGLGKQI 909
Query: 276 XXEKT-VKKLQKEVDRLEDELGINKDRYKSLADEMDS 169
+ KL E+ E + +KD+ S+ DE+++
Sbjct: 910 DKLSANISKLTVEIKTSERNVQKSKDKINSMEDEVEA 946
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 33.1 bits (72), Expect = 0.007
Identities = 17/67 (25%), Positives = 35/67 (52%)
Frame = -3
Query: 558 QLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKS 379
+LKE R E+ DG+ K + E++ A+DR+K+ + + ++++ V KS
Sbjct: 231 ELKETRKQLEELDGQRKSSGDKQLLLTQEIQKAQDRLKNAQKALKDAKKDV-VTAKDEKS 289
Query: 378 LEVSEEK 358
+ +E +
Sbjct: 290 VLATEHQ 296
Score = 25.8 bits (54), Expect = 1.1
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -3
Query: 552 KEARLLAEDADGKSDEVSRKLAFVEDELEVAED 454
+E+ L +++GK +++S L +ED L+ E+
Sbjct: 173 EESMNLLRESEGKLEKISEYLRTIEDRLKTLEE 205
Score = 23.8 bits (49), Expect = 4.6
Identities = 20/96 (20%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Frame = -3
Query: 615 KVLEXRAQQD--EERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKS 442
K+ E QQ ++ ++ + KEA+ E+ + ++ + K + +++ +++ +
Sbjct: 886 KLSEALKQQKTLQKELESWIQKEKEAQEKLEEDGKRMEKWATKENMLRQKIDECTEKI-A 944
Query: 441 GDAKISELEEELKVVGNSLKSLEVSEEKANQRVEEF 334
G + ++ + + SLKSL EKANQ ++++
Sbjct: 945 GLGALPNVDASYQKM--SLKSLFKELEKANQHLKKY 978
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 29.9 bits (64), Expect = 0.070
Identities = 27/135 (20%), Positives = 54/135 (40%), Gaps = 1/135 (0%)
Frame = -3
Query: 555 LKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSL 376
++E L + AD S + L V E + +DR+ S K +++EE K + +
Sbjct: 382 VQEYDRLKQKADATSSKYLIHLDSVNREQKSDQDRLDSEINKKAQIEENYKKIESEKNEA 441
Query: 375 EVSEEKANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVKKLQKEVDRLEDELGINK-DR 199
+EK ++ ++ + +LQ E+D + ++LG K D+
Sbjct: 442 LKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGTSKERIHELQSELDNVREQLGDAKIDK 501
Query: 198 YKSLADEMDSTFAEL 154
++ + EL
Sbjct: 502 HEDARRKKKQEVVEL 516
>AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 26.2 bits (55), Expect = 0.86
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = -3
Query: 588 DEERMDQLTNQL-KEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEE 412
D +++ + NQ +EA +AED K + ++ L V +E+AE + + L++
Sbjct: 153 DIDKIKKEANQYNREADRIAEDLANKMRDHAQLLENVGTNIELAETLLDR-----ASLQK 207
Query: 411 ELKVVGNSLKSLEVSEEKANQRVEE 337
E V ++LK L+ ++E+A + V E
Sbjct: 208 EDAV--DALKQLKYAKEQAEKAVAE 230
>AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 26.2 bits (55), Expect = 0.86
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = -3
Query: 588 DEERMDQLTNQL-KEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEE 412
D +++ + NQ +EA +AED K + ++ L V +E+AE + + L++
Sbjct: 153 DIDKIKKEANQYNREADRIAEDLANKMRDHAQLLENVGTNIELAETLLDR-----ASLQK 207
Query: 411 ELKVVGNSLKSLEVSEEKANQRVEE 337
E V ++LK L+ ++E+A + V E
Sbjct: 208 EDAV--DALKQLKYAKEQAEKAVAE 230
>AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 26.2 bits (55), Expect = 0.86
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = -3
Query: 588 DEERMDQLTNQL-KEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEE 412
D +++ + NQ +EA +AED K + ++ L V +E+AE + + L++
Sbjct: 153 DIDKIKKEANQYNREADRIAEDLANKMRDHAQLLENVGTNIELAETLLDR-----ASLQK 207
Query: 411 ELKVVGNSLKSLEVSEEKANQRVEE 337
E V ++LK L+ ++E+A + V E
Sbjct: 208 EDAV--DALKQLKYAKEQAEKAVAE 230
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 26.2 bits (55), Expect = 0.86
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = -3
Query: 588 DEERMDQLTNQL-KEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEE 412
D +++ + NQ +EA +AED K + ++ L V +E+AE + + L++
Sbjct: 1292 DIDKIKKEANQYNREADRIAEDLANKMRDHAQLLENVGTNIELAETLLDR-----ASLQK 1346
Query: 411 ELKVVGNSLKSLEVSEEKANQRVEE 337
E V ++LK L+ ++E+A + V E
Sbjct: 1347 EDAV--DALKQLKYAKEQAEKAVAE 1369
>AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 25.4 bits (53), Expect = 1.5
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = -3
Query: 588 DEERMDQLTNQL-KEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEE 412
D +++ + NQ +EA +AED K + ++ L V +E+AE + + L++
Sbjct: 153 DIDKIKKEANQYNREADRIAEDLATKMRDHAQLLENVGTNIELAETLLDR-----ASLQK 207
Query: 411 ELKVVGNSLKSLEVSEEKANQRVEE 337
E V ++LK L+ ++E+A + V E
Sbjct: 208 EDAV--DALKQLKYAKEQAEKAVAE 230
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 24.2 bits (50), Expect = 3.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 620 CAKCWXTGH 594
C KCW TGH
Sbjct: 418 CFKCWETGH 426
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 23.8 bits (49), Expect = 4.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 548 RPVSSPRTLTENPTRFRENWPSLKTNSKSP 459
RP++ TL NPT FR + S S P
Sbjct: 416 RPLTPGGTLPHNPTYFRTVYSSSDDGSIGP 445
>AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein.
Length = 165
Score = 23.8 bits (49), Expect = 4.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 335 NSSTRWLAFSSDTSRDLRELPTTFNSSSSSEILASPD 445
NSST +L +S ++ SSSSS +SPD
Sbjct: 97 NSSTGYLHQHQQSSSSSSSSSSSSMSSSSSSSFSSPD 133
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 23.4 bits (48), Expect = 6.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 567 AGPYAPRPAVPCXPTLCTY 623
A P PR +V C PT C +
Sbjct: 1 ARPQRPRLSVTCRPTKCLH 19
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,527
Number of Sequences: 2352
Number of extensions: 7178
Number of successful extensions: 40
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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