Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_B03
(735 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D55DEF Cluster: PREDICTED: similar to CG6531-PA;... 62 1e-08
UniRef50_Q9VWS4 Cluster: CG6531-PA; n=3; Eukaryota|Rep: CG6531-P... 61 3e-08
UniRef50_UPI0000DB7C2A Cluster: PREDICTED: similar to wengen CG6... 48 3e-04
UniRef50_Q3ZLC0 Cluster: Tumor necrosis factor receptor superfam... 42 0.016
UniRef50_A5JPX1 Cluster: Tumor necrosis factor receptor superfam... 38 0.26
UniRef50_Q7PRN3 Cluster: ENSANGP00000011847; n=1; Anopheles gamb... 37 0.59
UniRef50_Q95ND3 Cluster: Tumor necrosis factor type I; n=4; Carn... 36 0.78
UniRef50_Q71F55 Cluster: Herpes virus entry mediator; n=6; Murin... 36 1.4
UniRef50_A7SWR1 Cluster: Predicted protein; n=1; Nematostella ve... 34 4.2
UniRef50_Q2W351 Cluster: Putative uncharacterized protein; n=2; ... 33 5.5
UniRef50_Q5ZJG1 Cluster: Putative uncharacterized protein; n=3; ... 33 9.6
>UniRef50_UPI0000D55DEF Cluster: PREDICTED: similar to CG6531-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG6531-PA - Tribolium castaneum
Length = 245
Score = 62.5 bits (145), Expect = 1e-08
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Frame = -3
Query: 691 RTFWDQKNQACTPCTHCDPTLRLVVKYPCEVYRDTICQSIYELGIWPFESAQGDTKDNXX 512
R +++ + +C CT C +VV+ PCE +RDT+C+ I EL +S Q
Sbjct: 35 RQYFNSRLASCVNCTECVEG-DIVVR-PCEFHRDTLCRPIKEL----LKSIQPSNPHRHK 88
Query: 511 XXXXXXXXXXXXXXXSKDNDGEVT-------------WDLQTTSLTLAASGCXXXXXXXX 371
D D E+T WD Q +L+ A C
Sbjct: 89 HVHRGRHPGHEGTNNRSDGDLEITSTETPFSSAETLVWDWQAIALSSAVFACFLFFLAIT 148
Query: 370 VMSLYHAKQWKVIKRALKSDVQDLTAKLKLMESGGDAPAE 251
+ SL+ AKQW+ +K +DV++L+AKL LM + E
Sbjct: 149 LYSLHQAKQWRRLKDTFDADVEELSAKLSLMAASSSEKGE 188
>UniRef50_Q9VWS4 Cluster: CG6531-PA; n=3; Eukaryota|Rep: CG6531-PA -
Drosophila melanogaster (Fruit fly)
Length = 343
Score = 60.9 bits (141), Expect = 3e-08
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 11/144 (7%)
Frame = -3
Query: 685 FWDQKNQACTPCTHCDPTLRLVVKYPCEVYRDTICQSIYELGI-W--------PFESAQG 533
+WD + CTPCT C ++ PC+++ DTIC SIY+L I W ++ +
Sbjct: 105 WWDSQRDRCTPCTRCQG--EMIPLRPCQLHTDTICGSIYDLKIDWVVLAKTEPNWKERRK 162
Query: 532 DTKDNXXXXXXXXXXXXXXXXXSKDNDGEVTW--DLQTTSLTLAASGCXXXXXXXXVMSL 359
++ + W D QT L +A C + +
Sbjct: 163 SSEYEHFEHNAPLQHLTHEQLQQLHEEAAAAWVLDWQTGVLYVAVLTCLVFFSVAACILI 222
Query: 358 YHAKQWKVIKRALKSDVQDLTAKL 287
+H +QW+ ++R L DV++L+ KL
Sbjct: 223 HHMRQWRRMERRLDQDVEELSTKL 246
>UniRef50_UPI0000DB7C2A Cluster: PREDICTED: similar to wengen
CG6531-PA, partial; n=1; Apis mellifera|Rep: PREDICTED:
similar to wengen CG6531-PA, partial - Apis mellifera
Length = 200
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -3
Query: 706 LCERGRTFWDQKNQACTPCTHCDPTLRLVVKYPCEVYRDTICQSIYELGI-WPFESAQ 536
+C+ G FW ++ C PCT C P L PC +Y+D IC + L + W F S +
Sbjct: 35 VCKPGFEFWSVEHATCLPCTRCAPDFTL---SPCAIYKDAICGPLSALELDWSFLSTR 89
Score = 33.1 bits (72), Expect = 7.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 445 VTWDLQTTSLTLAASGCXXXXXXXXVMSLYHAKQWKVIKR 326
+ WD QT +L LA C +L +A+QW+ +K+
Sbjct: 157 ILWDWQTVALILAVCACILFFLVAGCSALIYARQWRRMKK 196
>UniRef50_Q3ZLC0 Cluster: Tumor necrosis factor receptor superfamily
member 14; n=1; Oreochromis mossambicus|Rep: Tumor
necrosis factor receptor superfamily member 14 -
Oreochromis mossambicus (Mozambique tilapia) (Tilapia
mossambica)
Length = 173
Score = 41.9 bits (94), Expect = 0.016
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = -3
Query: 688 TFWDQKN--QACTPCTHCDPTLRLVVKYPCEVYRDTICQS 575
T+ D+ N + CT CT+CD L VK PC DT+C++
Sbjct: 67 TYTDEPNGLERCTSCTNCDSVFGLRVKTPCNATSDTVCET 106
>UniRef50_A5JPX1 Cluster: Tumor necrosis factor receptor superfamily
member 6; n=1; Xenopus tropicalis|Rep: Tumor necrosis
factor receptor superfamily member 6 - Xenopus
tropicalis (Western clawed frog) (Silurana tropicalis)
Length = 320
Score = 37.9 bits (84), Expect = 0.26
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 703 CERGRTFWDQKN--QACTPCTHCDPTLRLVVKYPCEVYRDTICQ 578
C G+ + D+ N C C CDP V PC V+R+T+C+
Sbjct: 87 CTDGKDYMDKPNGYHQCLLCKRCDPEQGEDVHSPCTVFRNTVCK 130
>UniRef50_Q7PRN3 Cluster: ENSANGP00000011847; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000011847 - Anopheles gambiae
str. PEST
Length = 143
Score = 36.7 bits (81), Expect = 0.59
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -3
Query: 727 GKVWGGGLCERGRTFWDQKNQACTPCTHCDPTLRLVVKYPCEVYRDTICQSIYEL 563
G + CE ++WD C PC C VV PC+ Y +T+C ++ +L
Sbjct: 68 GTMLAEAACEPRASWWDPTVDDCVPCRVCAD--HQVVLRPCQDYMNTVCGTMKDL 120
>UniRef50_Q95ND3 Cluster: Tumor necrosis factor type I; n=4;
Carnivora|Rep: Tumor necrosis factor type I - Felis
silvestris catus (Cat)
Length = 446
Score = 36.3 bits (80), Expect = 0.78
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 703 CERGRTFWDQKN--QACTPCTHCDPTLRLVVKYPCEVYRDTIC 581
CE G TF +N + C C+ C + V PC VYRDT+C
Sbjct: 84 CENG-TFTASENYLRQCLSCSKCRKEMYQVEISPCTVYRDTVC 125
>UniRef50_Q71F55 Cluster: Herpes virus entry mediator; n=6;
Murinae|Rep: Herpes virus entry mediator - Mus musculus
(Mouse)
Length = 276
Score = 35.5 bits (78), Expect = 1.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 661 CTPCTHCDPTLRLVVKYPCEVYRDTICQSI 572
C PC CDP + L+ C ++DT+C+ I
Sbjct: 93 CLPCGVCDPDMGLLTWQECSSWKDTVCRCI 122
>UniRef50_A7SWR1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 401
Score = 33.9 bits (74), Expect = 4.2
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -3
Query: 703 CERGRTFWDQKN-QACTPCTHCDPTLRLVVKYPCEVYRDTICQSIYELG 560
CE GRT+ D + +C PC HCD V C + + +C + + G
Sbjct: 107 CEAGRTYSDGEGIGSCNPCGHCD---GFVTTKNCTTHSNIVCSTTCKKG 152
>UniRef50_Q2W351 Cluster: Putative uncharacterized protein; n=2;
Magnetospirillum magneticum AMB-1|Rep: Putative
uncharacterized protein - Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264)
Length = 141
Score = 33.5 bits (73), Expect = 5.5
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = -3
Query: 325 ALKSDVQDLTAKLKLMESGGDAPAEPVVTTDHHLYCNIHLGKEALL 188
AL D ++L A + +G DAPA + DH +C IH G + LL
Sbjct: 54 ALSVD-RELAASICHSGAGDDAPAPAMAPHDHCQFCQIHTGAKLLL 98
>UniRef50_Q5ZJG1 Cluster: Putative uncharacterized protein; n=3;
Gallus gallus|Rep: Putative uncharacterized protein -
Gallus gallus (Chicken)
Length = 427
Score = 32.7 bits (71), Expect = 9.6
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 703 CERGR-TFWDQKNQACTPCTHCDPTLRLVVKYPCEVYRDTIC 581
C G T D + C CT C L+ + K PC +DT+C
Sbjct: 100 CPNGTFTAVDNIMEKCFQCTRCRTELQQIEKTPCTQKQDTVC 141
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,631,383
Number of Sequences: 1657284
Number of extensions: 15095154
Number of successful extensions: 38844
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 36761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38818
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -