Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_B03
         (735 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    25   2.4  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   4.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   5.6  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    24   5.6  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   5.6  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   7.4  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    23   7.4  

>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 437 GPTDYQFDPGREWMCRFLSRGASN 366
           GP  Y  DP R W   +  +G SN
Sbjct: 250 GPFCYGADPNRNWDFHWAEQGTSN 273


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = +3

Query: 261 ASPPDSMSFSLAVRS*TSDLSARFITFHCLAWYSDITSTTRKKTTHPLAARVKLVVCRSH 440
           A   +  SFS    +  S  SA+ ++     W S+   +T+ +TTH L   +     R H
Sbjct: 819 AEDSECCSFSGVSNAGLSRSSAKQLSMR--KWQSEWDCSTKGRTTHALIPNIAAWTSRKH 876



 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 564 SS*MDWQMVSRYTSHGYLTTRRRVGSQC 647
           +S M+W++ + YT   +   R   GS+C
Sbjct: 179 ASSMNWRVSNAYTLSDHRVIRYTAGSKC 206


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 649 CTGCRPGSSGPK 684
           CT CRPG  G K
Sbjct: 580 CTDCRPGMKGDK 591


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 707 FV*AGAYLLGPEEPGLHP 654
           F  +G +++GPE  G HP
Sbjct: 374 FFRSGLFVVGPESAGAHP 391


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 707 FV*AGAYLLGPEEPGLHP 654
           F  +G +++GPE  G HP
Sbjct: 374 FFRSGLFVVGPESAGAHP 391


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 197 SSAWYNTNQKRHGQRVHTREASVLIKYHRIN 105
           +S++Y  + KR    VH +E S L+K H I+
Sbjct: 181 NSSYYTIDNKR----VHFKEVSKLLKQHGID 207


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 657 VQAWFFWSQKVRPR 698
           V+ W FWS   RPR
Sbjct: 13  VRVWLFWSYLRRPR 26


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 801,398
Number of Sequences: 2352
Number of extensions: 15949
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)