Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_A22
         (330 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC070260-1|AAH70260.1|   97|Homo sapiens chromosome 6 open readi...    48   9e-06
AL096817-2|CAI18941.2|   97|Homo sapiens chromosome 6 open readi...    48   9e-06
AF311339-1|AAK38513.1|  138|Homo sapiens DC18 protein.                 48   9e-06

>BC070260-1|AAH70260.1|   97|Homo sapiens chromosome 6 open reading
           frame 162 protein.
          Length = 97

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 23/53 (43%), Positives = 30/53 (56%)
 Frame = -3

Query: 244 GLRSMRSTTAFRVVNFELYAKPNIVIMSIGLTCFGLALGYIADMRQTXEAXGD 86
           GLR +R+TT FR VN EL+ KPN  +M+ GL    L + YI  +    E   D
Sbjct: 24  GLRGVRTTTLFRAVNPELFIKPNKPVMAFGLVTLSLCVAYIGYLHAIQENKKD 76


>AL096817-2|CAI18941.2|   97|Homo sapiens chromosome 6 open reading
           frame 162 protein.
          Length = 97

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 23/53 (43%), Positives = 30/53 (56%)
 Frame = -3

Query: 244 GLRSMRSTTAFRVVNFELYAKPNIVIMSIGLTCFGLALGYIADMRQTXEAXGD 86
           GLR +R+TT FR VN EL+ KPN  +M+ GL    L + YI  +    E   D
Sbjct: 24  GLRGVRTTTLFRAVNPELFIKPNKPVMAFGLVTLSLCVAYIGYLHAIQENKKD 76


>AF311339-1|AAK38513.1|  138|Homo sapiens DC18 protein.
          Length = 138

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 23/53 (43%), Positives = 30/53 (56%)
 Frame = -3

Query: 244 GLRSMRSTTAFRVVNFELYAKPNIVIMSIGLTCFGLALGYIADMRQTXEAXGD 86
           GLR +R+TT FR VN EL+ KPN  +M+ GL    L + YI  +    E   D
Sbjct: 24  GLRGVRTTTLFRAVNPELFIKPNKPVMAFGLVTLSLCVAYIGYLHAIQENKKD 76


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,050,363
Number of Sequences: 237096
Number of extensions: 673904
Number of successful extensions: 833
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)