Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_A20
         (479 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z23141-1|CAA80672.1|  479|Homo sapiens cholinergic receptor, nic...    31   2.1  
AK000104-1|BAA90948.1|  413|Homo sapiens protein ( Homo sapiens ...    29   6.4  
BC113371-1|AAI13372.1| 1036|Homo sapiens cysteine rich transmemb...    29   8.5  
BC111989-1|AAI11990.1| 1036|Homo sapiens cysteine rich transmemb...    29   8.5  
AY358371-1|AAQ88737.1| 1036|Homo sapiens CRIM1 protein.                29   8.5  
AF168681-1|AAG37011.1|  925|Homo sapiens CRIM1 protein protein.        29   8.5  
AF167706-1|AAF34409.1| 1036|Homo sapiens cysteine-rich repeat-co...    29   8.5  
AC007378-1|AAX88862.1|  763|Homo sapiens unknown protein.              29   8.5  
AB209139-1|BAD92376.1| 1058|Homo sapiens cysteine-rich motor neu...    29   8.5  

>Z23141-1|CAA80672.1|  479|Homo sapiens cholinergic receptor,
           nicotinic, alpha polypeptide 7 protein.
          Length = 479

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
 Frame = -2

Query: 181 DASHCVTRPQTCAVCACKPGSPT-----VLGAAPAAGKPDL 74
           D  HCV  P +  VC   P  PT     + G  P  G PDL
Sbjct: 370 DGVHCVPTPDSGVVCGAWPAPPTHDEHLLHGGQPPEGDPDL 410


>AK000104-1|BAA90948.1|  413|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20097 fis, clone COL04387. ).
          Length = 413

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -3

Query: 180 TLHTASPAHRPARSVRANRAHRQYWGPPPPPANRIWDHLFLHKLISPC 37
           +L    P  +P   +   R+   Y  PPP PAN ++  LF    +SPC
Sbjct: 367 SLQAPPPGFKPFSCLSLPRSW-DYRRPPPRPANFLYFLLFSRDGVSPC 413


>BC113371-1|AAI13372.1| 1036|Homo sapiens cysteine rich
           transmembrane BMP regulator 1 (chordin-like) protein.
          Length = 1036

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 175 SHCVTRPQTCAVCACKPGSPTVLGAAPAAGKP 80
           S CV  P  C    C+PG+  +L  + A+GKP
Sbjct: 208 SRCVCNPAGCLRKVCQPGNLNIL-VSKASGKP 238


>BC111989-1|AAI11990.1| 1036|Homo sapiens cysteine rich
           transmembrane BMP regulator 1 (chordin-like) protein.
          Length = 1036

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 175 SHCVTRPQTCAVCACKPGSPTVLGAAPAAGKP 80
           S CV  P  C    C+PG+  +L  + A+GKP
Sbjct: 208 SRCVCNPAGCLRKVCQPGNLNIL-VSKASGKP 238


>AY358371-1|AAQ88737.1| 1036|Homo sapiens CRIM1 protein.
          Length = 1036

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 175 SHCVTRPQTCAVCACKPGSPTVLGAAPAAGKP 80
           S CV  P  C    C+PG+  +L  + A+GKP
Sbjct: 208 SRCVCNPAGCLRKVCQPGNLNIL-VSKASGKP 238


>AF168681-1|AAG37011.1|  925|Homo sapiens CRIM1 protein protein.
          Length = 925

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 175 SHCVTRPQTCAVCACKPGSPTVLGAAPAAGKP 80
           S CV  P  C    C+PG+  +L  + A+GKP
Sbjct: 97  SRCVCNPAGCLRKVCQPGNLNIL-VSKASGKP 127


>AF167706-1|AAF34409.1| 1036|Homo sapiens cysteine-rich
           repeat-containing protein S52 precursor protein.
          Length = 1036

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 175 SHCVTRPQTCAVCACKPGSPTVLGAAPAAGKP 80
           S CV  P  C    C+PG+  +L  + A+GKP
Sbjct: 208 SRCVCNPAGCLRKVCQPGNLNIL-VSKASGKP 238


>AC007378-1|AAX88862.1|  763|Homo sapiens unknown protein.
          Length = 763

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 175 SHCVTRPQTCAVCACKPGSPTVLGAAPAAGKP 80
           S CV  P  C    C+PG+  +L  + A+GKP
Sbjct: 97  SRCVCNPAGCLRKVCQPGNLNIL-VSKASGKP 127


>AB209139-1|BAD92376.1| 1058|Homo sapiens cysteine-rich motor neuron
           1 variant protein.
          Length = 1058

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 175 SHCVTRPQTCAVCACKPGSPTVLGAAPAAGKP 80
           S CV  P  C    C+PG+  +L  + A+GKP
Sbjct: 230 SRCVCNPAGCLRKVCQPGNLNIL-VSKASGKP 260


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,065,242
Number of Sequences: 237096
Number of extensions: 1701196
Number of successful extensions: 6704
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6653
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)