Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_A15
         (744 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0068 + 14711891-14712418                                         31   0.97 
01_07_0259 - 42353992-42354111,42354255-42354385,42355484-423555...    31   0.97 
10_08_0391 + 17486109-17486210,17487032-17487129,17487331-174873...    28   6.8  
03_06_0272 - 32775620-32776501                                         28   9.0  

>02_03_0068 + 14711891-14712418
          Length = 175

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -2

Query: 119 RXAXQREDTCRVERGGGEEKEDVEPRDESNVRR 21
           R A QRE+  R  RGGGEE+++ E       RR
Sbjct: 57  RGARQREEERRAIRGGGEEEKEEEEESPGRRRR 89


>01_07_0259 -
           42353992-42354111,42354255-42354385,42355484-42355571,
           42356439-42357282,42357354-42357934,42358962-42359159
          Length = 653

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +3

Query: 357 TVQELQEKY*YSIKRTYKNRTNFFWEQQQHRASEPLQRVYNK 482
           T +E+ +KY    +R  KN + F+ + + HRA E L+ VY K
Sbjct: 608 TWEEIVQKYDTMFERNAKNGS-FYLQSKVHRAKECLEAVYQK 648


>10_08_0391 +
           17486109-17486210,17487032-17487129,17487331-17487361,
           17487655-17487707,17489254-17489402,17489828-17489898,
           17489988-17490131,17490249-17490309,17492180-17492265,
           17492839-17492926,17494012-17494142,17494266-17494394
          Length = 380

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +3

Query: 357 TVQELQEKY*YSIKRTYKNRTNFFWEQQQHRASEPLQRVYNK 482
           T +E+ ++Y    +R  K+ + F+ + + HRA E L+ VY K
Sbjct: 332 TWEEIAQRYDNLFERNAKSGS-FYLQSKVHRAKECLENVYQK 372


>03_06_0272 - 32775620-32776501
          Length = 293

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 122 RRXAXQREDTCRVERGGGEEKEDVEPRDE 36
           RR   +RE      RGGGE++ +  PR E
Sbjct: 194 RRRRRRREKLAEATRGGGEKRREEPPRYE 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,894,888
Number of Sequences: 37544
Number of extensions: 251760
Number of successful extensions: 744
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)