Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_A10
(767 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 39 7e-04
SPCC825.03c |psy1|sso1|SNARE Psy1|Schizosaccharomyces pombe|chr ... 34 0.019
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 33 0.045
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 33 0.045
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 30 0.42
SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1 |Schizosa... 29 0.73
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 29 0.97
SPBC530.14c |dsk1||SR protein-specific kinase Dsk1|Schizosacchar... 28 1.3
SPAC31G5.08 |ups1|ups|uroporphyrinogen-III synthase Ups1|Schizos... 28 1.7
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 28 1.7
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 27 2.2
SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.2
SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces ... 27 3.9
SPAC5D6.02c |mug165||sequence orphan|Schizosaccharomyces pombe|c... 27 3.9
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 5.2
SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces pom... 26 5.2
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 6.8
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 26 6.8
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 26 6.8
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 25 9.0
SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyc... 25 9.0
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 25 9.0
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 39.1 bits (87), Expect = 7e-04
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Frame = -1
Query: 512 LDLSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIF 333
L+ +N++ +++ ++EL ES N NEL ++ ++ K+ +L +
Sbjct: 822 LNQDKNQIETLNERISAAADELSSMESINKNQANELKLAKQKCSNLQEKINFGNKLAKEH 881
Query: 332 TEKVLQQEQDID---RISNTVVGATENVKDANEQIK 234
TEK+ E+D++ + ++T+ + VK N+ +K
Sbjct: 882 TEKISSLEKDLEAATKTASTLSKELKTVKSENDSLK 917
Score = 29.9 bits (64), Expect = 0.42
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = -1
Query: 443 MFESENVQLLNELN---SMTEEVKQIESKVLHIAELQEIFTEKVLQQEQDIDRISNTVVG 273
+ S+N LL+EL S+ + +ESK + + TEK+ ++ D + NT+
Sbjct: 723 IISSKNRDLLSELEKSKSLNNSLAALESKNKKLENDLNLLTEKLNKKNADTESFKNTIRE 782
Query: 272 ATENVKDANEQI 237
A + K N+ +
Sbjct: 783 AELSKKALNDNL 794
Score = 25.4 bits (53), Expect = 9.0
Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Frame = -1
Query: 476 DEGELTSEELQMFESENVQLLNELNSMTEEVKQ----IES--KVLHIAEL-QEIFTEKVL 318
++ + + L ES+N +L N+LN +TE++ + ES + AEL ++ + +
Sbjct: 736 EKSKSLNNSLAALESKNKKLENDLNLLTEKLNKKNADTESFKNTIREAELSKKALNDNLG 795
Query: 317 QQEQDIDRISNTVVGATENVKDANEQIKQ 231
+E I + N + + +++ Q+ Q
Sbjct: 796 NKENIISDLKNKLSEESTRLQELQSQLNQ 824
>SPCC825.03c |psy1|sso1|SNARE Psy1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 284
Score = 34.3 bits (75), Expect = 0.019
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = -1
Query: 416 LNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQDIDRISNTVVGATENVKDANEQI 237
L E+ ++K+IE + +A+L + V +QE +D+I V N+ + + +
Sbjct: 181 LREVQERHADIKRIERTIAELAQLFQDMATMVQEQEPMVDKIVTDAVNVRTNMGEGTQHM 240
Query: 236 KQAIQ 222
+AI+
Sbjct: 241 DRAIK 245
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 33.1 bits (72), Expect = 0.045
Identities = 19/98 (19%), Positives = 48/98 (48%)
Frame = -1
Query: 506 LSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTE 327
+SE + ++ + + ++++ +N L+ ELN + ++ SKVL + E + +
Sbjct: 421 VSEQRDLLYQEQIQSSIKDMENVFRKNEYLMEELNELKNNLEVESSKVLRLDEEMKCLKD 480
Query: 326 KVLQQEQDIDRISNTVVGATENVKDANEQIKQAIQRNA 213
+ L Q + +++ G +++K+ + I R+A
Sbjct: 481 EQLSQFDTVFSLTDERDGLQKDLKNTKGNLDDEIGRSA 518
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 33.1 bits (72), Expect = 0.045
Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = -1
Query: 500 ENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKV-LHIAELQEIFTE 327
E + +SD+ + ++ E+EN +L+ LNS+ E Q+ K+ +++ E +++ TE
Sbjct: 98 EEKTEHLSDDNVSLEKRVEYLETENTKLVKTLNSLNSEFLQLLRKIAINVKEGRQLTTE 156
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 29.9 bits (64), Expect = 0.42
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = -1
Query: 383 KQIESKVLHIAELQEIFTEKVLQQEQDIDRISNTVVGATENVKDANEQIKQAIQRNAG 210
K I S V IA L E F KV+ + I ISN A +NV+ ++ I R G
Sbjct: 146 KVIASNVAAIASLVEQFGAKVIPSKMIIPHISNLFGHADKNVRKEASRLTVNIYRWTG 203
>SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 222
Score = 29.1 bits (62), Expect = 0.73
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 503 SENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEK 324
+ENE+ I + +++LQ+ NV+L ++ +E ++ + I ELQE + +
Sbjct: 21 NENELHINNSGMSELNKKLQL---PNVELSTLSHTQEQEFNELNKLIRKINELQEFYLLE 77
Query: 323 VLQQ-------EQDIDRISNTVVGATENVKDANEQIKQAI 225
L + + D D I + EN K AN +K +
Sbjct: 78 DLAKPVTNAGADADEDTIVKDLKKELENEKKANHSLKNEL 117
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 28.7 bits (61), Expect = 0.97
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -1
Query: 500 ENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQE 339
EN++ I+ E++Q SE NEL S+ E ++ +++ A++ E
Sbjct: 858 ENKLQIIKSSSSGLEEQMQRINSEISDKRNELESLEELQHEVATRIEQDAKINE 911
>SPBC530.14c |dsk1||SR protein-specific kinase
Dsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 704 YLKAVCKV-HSELKAMRVKRALDMRKLSRLELPATKSS 594
YL C + H++LK V +D L +E PAT SS
Sbjct: 203 YLHRECGIIHTDLKPENVLICIDQDALQHIEAPATTSS 240
>SPAC31G5.08 |ups1|ups|uroporphyrinogen-III synthase
Ups1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 251
Score = 27.9 bits (59), Expect = 1.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = -1
Query: 323 VLQQEQDIDRISNTVVGATENVKDANEQIKQAIQRN 216
++Q++ DR+ + +V AT+ +++ QIK I+++
Sbjct: 148 IIQRKLGDDRVDSLIVYATQELENTETQIKDTIRKH 183
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.9 bits (59), Expect = 1.7
Identities = 23/155 (14%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Frame = -1
Query: 683 VHSELKAMRVKRALDMRKLSRLELPATKSSIPNPFTLDKVXXXXXXXXXXXXXXXXNLDL 504
+ +L ++ +R+L + KL+ LE KS + + + D++ +
Sbjct: 707 IQLQLTSLTSERSLALEKLNDLE----KSLVLSERSKDELDESYKSLQEQLASKKIEVQN 762
Query: 503 SENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEK 324
++++I + + E ++ + +SEN+ L + + + ++ +ESK+ + + +
Sbjct: 763 VSSQLSICNSQLEQSNHIVDNLKSENLLLTSVKDKLKADLSNLESKLSSLQQDNFHMKAQ 822
Query: 323 VLQQEQD----IDRISNTVVGATENVKDANEQIKQ 231
+ Q+ +D +++ ++ + +++ AN ++ +
Sbjct: 823 IESSNQEYTATVDSMNSRILELSNDLRVANSKLSE 857
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 27.5 bits (58), Expect = 2.2
Identities = 22/94 (23%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Frame = -1
Query: 482 MSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQ--E 309
+ ++ +LT + + ESE ++ NEL +T + + ++++ A + + +EK + Q +
Sbjct: 86 LEEKLQLTETKCRNAESEKSRVENELEDLTSSLFEEANRMVANARKETVASEKRVNQLKK 145
Query: 308 QDIDR---ISNTVVGATENVKDANEQIKQAIQRN 216
Q +D +S+T TE +KD + + ++N
Sbjct: 146 QLVDAETLLSSTQHQLTE-LKDVMHSMSDSHEQN 178
>SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 166
Score = 27.5 bits (58), Expect = 2.2
Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = -1
Query: 467 ELTSEELQMFESENVQLLNELNSMTE----EVKQIESKVLHIAELQEIFTEKVLQQEQDI 300
E + ELQ + ENV L +LN++ + K ++ + H+A E++ ++
Sbjct: 67 ESAALELQKLKQENVLLRKDLNNLEQISDCYAKGMDDIMKHVATYTATMNERMNACHKEY 126
Query: 299 DRISNTVVGATENVKDANEQIKQAIQR 219
++ + ++ NEQ Q++ +
Sbjct: 127 IKMYEALASERNSLYKINEQNVQSLNK 153
>SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 279
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 716 LIDAYLKAVCKVHSELKAMRVKRA 645
+ID++L+ + KVH E K +R++ A
Sbjct: 170 IIDSHLEKIAKVHWETKFIRIEAA 193
>SPAC5D6.02c |mug165||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 300
Score = 26.6 bits (56), Expect = 3.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 413 LTAVHSPTQTFATLLKSTLLHQT*LPSHSL 502
+T VH Q FATLL+ LL +T H L
Sbjct: 208 VTTVHKSYQRFATLLRRHLLDKTAKRYHDL 237
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/68 (22%), Positives = 32/68 (47%)
Frame = -1
Query: 503 SENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEK 324
++ +A + D T ++ + + E+ L N + E+ + SKV + Q EK
Sbjct: 885 TQERLANIEDSFSETKQQNENLQRESASLKQINNELESELLEKTSKVETLLSEQNELKEK 944
Query: 323 VLQQEQDI 300
+ +E+D+
Sbjct: 945 LSLEEKDL 952
>SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 26.2 bits (55), Expect = 5.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 428 NVQLLNELNSMTEEVKQ 378
NV L+N++NS+ EEV Q
Sbjct: 253 NVDLINKINSLKEEVSQ 269
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 422 QLLNELNSMTEEVKQIESKVLHIAELQEIFT 330
QL ++S EEV ++ K+L ++ +I+T
Sbjct: 996 QLKPYMSSRNEEVMEVSEKLLELSRFDQIYT 1026
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 25.8 bits (54), Expect = 6.8
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Frame = -1
Query: 512 LDL--SENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEV----KQIESKVLHIA 351
LDL NE ++ +G+ E++Q E+EN ++L + ++ EE+ K + +A
Sbjct: 568 LDLVNKRNEDLLIELQGK--EEKIQYLETENEEVLQKYENLQEELSSTRKLLTKNEAAVA 625
Query: 350 ELQEIFTEKVLQQEQDIDRISNTVVGATENVKDANEQIK 234
E Q E++ E +I + + G +++++ K
Sbjct: 626 EQQS--NEEMHSNEPNILNLYSVFEGKVDSLQELYNAFK 662
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 458 SEELQMFESENVQLLNELNSMTEEV 384
SEE ++ + E ++L ELN M +E+
Sbjct: 199 SEEHELDDIETIKLFEELNEMKDEI 223
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 25.4 bits (53), Expect = 9.0
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -1
Query: 476 DEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEK--VLQQEQD 303
+EGELTSEE E E +Q L + + K H AE + + K +L+ +++
Sbjct: 139 EEGELTSEE----EKEPIQDLRKSHKRKSVEKSSVPNKKHKAERKRSPSPKIEILEDDEE 194
Query: 302 IDRISN 285
I+ +++
Sbjct: 195 IEDVAS 200
>SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1050
Score = 25.4 bits (53), Expect = 9.0
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +1
Query: 220 LCIACLICSLASLTFSVAPTTVFDILSMS 306
L + C++C L S F+ A +F ++ +S
Sbjct: 213 LAMCCILCCLGSAIFAKASNALFVVIILS 241
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 467 ELTSEELQMFESENVQLLNELNSMTEEVKQIESKV 363
E + ESEN L+NE+ M V+Q+E ++
Sbjct: 258 ETIKSDCYKVESENKGLINEVMDMRNFVQQLEQEL 292
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,290,968
Number of Sequences: 5004
Number of extensions: 36145
Number of successful extensions: 170
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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