Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_A10
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067949-4|AAC19237.1| 415|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 39 0.005
U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 36 0.024
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 36 0.024
U80931-4|AAB38000.1| 287|Caenorhabditis elegans Syntaxin protei... 36 0.032
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 36 0.042
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 36 0.042
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 36 0.042
AF099925-12|AAC69509.1| 257|Caenorhabditis elegans Hypothetical... 35 0.073
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 32 0.52
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 32 0.52
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 32 0.52
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 32 0.52
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 31 0.68
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 31 0.68
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 31 0.90
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 31 1.2
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 30 2.1
AL132862-3|CAB70225.1| 294|Caenorhabditis elegans Hypothetical ... 30 2.1
Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical pr... 29 2.8
X59156-1|CAA41870.1| 77|Caenorhabditis elegans transposase pro... 29 2.8
U23510-12|AAK71391.2| 212|Caenorhabditis elegans Hypothetical p... 29 2.8
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 28 6.4
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 28 6.4
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical p... 28 6.4
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 28 6.4
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 28 6.4
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 28 6.4
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 28 6.4
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 28 6.4
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 28 6.4
AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein. 28 6.4
AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical ... 28 6.4
Z83230-8|CAC42303.1| 291|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z83230-7|CAB05747.1| 291|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z78544-2|CAB01758.1| 368|Caenorhabditis elegans Hypothetical pr... 28 8.4
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 28 8.4
AF047885-1|AAD10538.1| 291|Caenorhabditis elegans UNC-64 syntax... 28 8.4
AB008844-1|BAA23586.1| 291|Caenorhabditis elegans syntaxin C pr... 28 8.4
AB008843-1|BAA23585.1| 291|Caenorhabditis elegans syntaxin B pr... 28 8.4
AB008842-1|BAA23584.1| 291|Caenorhabditis elegans syntaxin A pr... 28 8.4
>AF067949-4|AAC19237.1| 415|Caenorhabditis elegans Hypothetical
protein T10H9.3 protein.
Length = 415
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = -1
Query: 476 DEGELTSEELQM-FESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQDI 300
++GE + E Q E + + E +E+ +++ + IA L +F+EKVL+Q++D+
Sbjct: 304 EQGEQFAVEFQQQAELRKKEFVKE--DQDDEILKLQQHLTEIASLHTVFSEKVLEQDRDV 361
Query: 299 DRISNTVVGATENVKDANEQIKQAIQRNAG 210
+ I + + TEN+ D NE I++AI N+G
Sbjct: 362 ELIHDHALHTTENITDGNEWIRKAI-TNSG 390
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/98 (21%), Positives = 47/98 (47%)
Frame = -1
Query: 512 LDLSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIF 333
L+ S +E I+ + E +ELQ + L E+N +T + + E + I LQ
Sbjct: 458 LENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQI 517
Query: 332 TEKVLQQEQDIDRISNTVVGATENVKDANEQIKQAIQR 219
+ +++E+ ++ + + A ++ A E ++ I++
Sbjct: 518 YQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQ 555
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/98 (21%), Positives = 47/98 (47%)
Frame = -1
Query: 512 LDLSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIF 333
L+ S +E I+ + E +ELQ + L E+N +T + + E + I LQ
Sbjct: 458 LENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQI 517
Query: 332 TEKVLQQEQDIDRISNTVVGATENVKDANEQIKQAIQR 219
+ +++E+ ++ + + A ++ A E ++ I++
Sbjct: 518 YQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQ 555
>U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical
protein C43G2.2 protein.
Length = 869
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/88 (25%), Positives = 45/88 (51%)
Frame = -1
Query: 482 MSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQD 303
++ E LTS + +ESE ++ + M E+KQ++ A + +FT + + +
Sbjct: 581 LTAESALTSMR-EKYESEKKMMMEINDKMRRELKQLKEDAATFASHRAMFTARGEELKSK 639
Query: 302 IDRISNTVVGATENVKDANEQIKQAIQR 219
++ +SN + E K N+ ++ AIQ+
Sbjct: 640 VEELSNELRANEEEKKTLNQLLRLAIQQ 667
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical
protein R13G10.1 protein.
Length = 1469
Score = 36.3 bits (80), Expect = 0.024
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Frame = -1
Query: 512 LDLSENE---MAIMSDEGELTSEEL----QMFESENVQLLNELNSMTEEVK-------QI 375
LD+SE+E M IM ++G+ +EL Q +EN++ ELN++T E++ +
Sbjct: 508 LDVSESELKDMTIMMEQGQKRVDELKGTLQTMMAENIRDNTELNAVTTELQDRKLKFDKA 567
Query: 374 ESKVLHIAELQEIFTEKVLQQEQDIDRISNT 282
K+ H+ +++ K + +Q++ SNT
Sbjct: 568 VEKLPHLKSTEQLLRSKKYELDQEVIEASNT 598
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 36.3 bits (80), Expect = 0.024
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Frame = -1
Query: 512 LDLSENE---MAIMSDEGELTSEEL----QMFESENVQLLNELNSMTEEVK-------QI 375
LD+SE+E M IM ++G+ +EL Q +EN++ ELN++T E++ +
Sbjct: 508 LDVSESELKDMTIMMEQGQKRVDELKGTLQTMMAENIRDNTELNAVTTELQDRKLKFDKA 567
Query: 374 ESKVLHIAELQEIFTEKVLQQEQDIDRISNT 282
K+ H+ +++ K + +Q++ SNT
Sbjct: 568 VEKLPHLKSTEQLLRSKKYELDQEVIEASNT 598
>U80931-4|AAB38000.1| 287|Caenorhabditis elegans Syntaxin protein 4
protein.
Length = 287
Score = 35.9 bits (79), Expect = 0.032
Identities = 18/98 (18%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = -1
Query: 512 LDLSENEMAIMSDEGEL--TSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQE 339
++++++E+ + G L + + + ++ L +++ + ++ +E ++ + EL
Sbjct: 150 IEVTDSEIDGAIENGSLFQLTRNINLGVAQKKALFDDMKNRATDIMILEKQIREVEELFV 209
Query: 338 IFTEKVLQQEQDIDRISNTVVGATENVKDANEQIKQAI 225
V Q + +DRI +V+ A E + A + ++QA+
Sbjct: 210 DMQLLVQSQGETVDRIETSVIRAEEYAEQAQQNVRQAV 247
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 35.5 bits (78), Expect = 0.042
Identities = 22/87 (25%), Positives = 42/87 (48%)
Frame = -1
Query: 500 ENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKV 321
ENE+ D TS E Q+ + + + NELN +Q+E+++L++ +V
Sbjct: 1876 ENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNV-------RSEV 1928
Query: 320 LQQEQDIDRISNTVVGATENVKDANEQ 240
+Q + ++N V ++DAN +
Sbjct: 1929 RDYKQRVHDVNNRVSELQRQLQDANTE 1955
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 35.5 bits (78), Expect = 0.042
Identities = 22/87 (25%), Positives = 42/87 (48%)
Frame = -1
Query: 500 ENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKV 321
ENE+ D TS E Q+ + + + NELN +Q+E+++L++ +V
Sbjct: 1949 ENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNV-------RSEV 2001
Query: 320 LQQEQDIDRISNTVVGATENVKDANEQ 240
+Q + ++N V ++DAN +
Sbjct: 2002 RDYKQRVHDVNNRVSELQRQLQDANTE 2028
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 35.5 bits (78), Expect = 0.042
Identities = 22/87 (25%), Positives = 42/87 (48%)
Frame = -1
Query: 500 ENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKV 321
ENE+ D TS E Q+ + + + NELN +Q+E+++L++ +V
Sbjct: 1949 ENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNV-------RSEV 2001
Query: 320 LQQEQDIDRISNTVVGATENVKDANEQ 240
+Q + ++N V ++DAN +
Sbjct: 2002 RDYKQRVHDVNNRVSELQRQLQDANTE 2028
>AF099925-12|AAC69509.1| 257|Caenorhabditis elegans Hypothetical
protein K01A2.10 protein.
Length = 257
Score = 34.7 bits (76), Expect = 0.073
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Frame = -1
Query: 452 ELQMFESENVQLL----NELNSMTEEVKQIESKVLH--------IAELQEIFTEKVLQQE 309
++Q ++E +L NE+N + E+++ + K LH IAEL+++ TEK +
Sbjct: 74 QIQFLQNETSNMLKSLHNEINRLGNELREEKRKTLHGDDDSADKIAELEKVITEKEAYTK 133
Query: 308 QDIDRISNTVVGATENVKDANEQIKQ 231
++S T+ E + +++I+Q
Sbjct: 134 NLEKKVSTTIQKLQEQITIQSDRIRQ 159
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/80 (20%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = -1
Query: 455 EELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQDIDRI--SNT 282
EE+QM++ E ++++ ++ + V++ E+K+ + E+Q+ + + E D R T
Sbjct: 1021 EEIQMWQEETIEIIQLVDKTPKTVQESETKIKKVNEIQQTVVAQTRRLE-DASRFRKDET 1079
Query: 281 VVGATENVKDANEQIKQAIQ 222
+ +Q++Q ++
Sbjct: 1080 FTKTVQETMTKQQQVQQLVK 1099
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = -1
Query: 458 SEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFT------EKVLQQEQDID 297
+EEL + + QLL E S ++ I +K+L + +++ + E+V + +
Sbjct: 2335 AEELAAYLNSAQQLLKESKSKADKSNNI-AKMLQLTKVENLVAAITDDLERVEAAKGEFQ 2393
Query: 296 RISNTVVGATENVKDANEQIKQAI 225
+++ + TEN+KD E++ A+
Sbjct: 2394 KLNVAIGNITENLKDKREEMTHAV 2417
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = -1
Query: 458 SEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFT------EKVLQQEQDID 297
+EEL + + QLL E S ++ I +K+L + +++ + E+V + +
Sbjct: 2335 AEELAAYLNSAQQLLKESKSKADKSNNI-AKMLQLTKVENLVAAITDDLERVEAAKGEFQ 2393
Query: 296 RISNTVVGATENVKDANEQIKQAI 225
+++ + TEN+KD E++ A+
Sbjct: 2394 KLNVAIGNITENLKDKREEMTHAV 2417
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = -1
Query: 458 SEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFT------EKVLQQEQDID 297
+EEL + + QLL E S ++ I +K+L + +++ + E+V + +
Sbjct: 149 AEELAAYLNSAQQLLKESKSKADKSNNI-AKMLQLTKVENLVAAITDDLERVEAAKGEFQ 207
Query: 296 RISNTVVGATENVKDANEQIKQAI 225
+++ + TEN+KD E++ A+
Sbjct: 208 KLNVAIGNITENLKDKREEMTHAV 231
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = -1
Query: 458 SEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFT------EKVLQQEQDID 297
+EEL + + QLL E S ++ I +K+L + +++ + E+V + +
Sbjct: 2335 AEELAAYLNSAQQLLKESKSKADKSNNI-AKMLQLTKVENLVAAITDDLERVEAAKGEFQ 2393
Query: 296 RISNTVVGATENVKDANEQIKQAI 225
+++ + TEN+KD E++ A+
Sbjct: 2394 KLNVAIGNITENLKDKREEMTHAV 2417
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = -1
Query: 458 SEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFT------EKVLQQEQDID 297
+EEL + + QLL E S ++ I +K+L + +++ + E+V + +
Sbjct: 2335 AEELAAYLNSAQQLLKESKSKADKSNNI-AKMLQLTKVENLVAAITDDLERVEAAKGEFQ 2393
Query: 296 RISNTVVGATENVKDANEQIKQAI 225
+++ + TEN+KD E++ A+
Sbjct: 2394 KLNVAIGNITENLKDKREEMTHAV 2417
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 31.5 bits (68), Expect = 0.68
Identities = 22/90 (24%), Positives = 47/90 (52%)
Frame = -1
Query: 506 LSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTE 327
L + + +S++ SEEL+ ++ NV+L + L S+T E + I +++E E
Sbjct: 147 LCQETIPAISNKVTSLSEELENCQTLNVELEDRLLSITSESEA-------ILKIKEKVVE 199
Query: 326 KVLQQEQDIDRISNTVVGATENVKDANEQI 237
+ L+ ++I+ + G E +K++N +
Sbjct: 200 ENLRIRKEIEELRRENEGIAEKMKESNNAV 229
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = -1
Query: 455 EELQMFESENVQLLNELNSMTEEVKQIESKVLHIAE-----LQEIFTEKVLQQEQDIDRI 291
EEL+ ++N L N+++S ++ + E++ E ++ + EKVL ++ I I
Sbjct: 96 EELKTISTQNETLKNQMSSYSDHPLEKEAEERQTVEQLKEAIKNLTDEKVLLCQETIPAI 155
Query: 290 SNTVVGATENVKD 252
SN V +E +++
Sbjct: 156 SNKVTSLSEELEN 168
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 31.5 bits (68), Expect = 0.68
Identities = 22/95 (23%), Positives = 47/95 (49%)
Frame = -1
Query: 500 ENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKV 321
ENE++ + E E + + S+ V++L++ ++ EE + ++ + ++ E+
Sbjct: 3276 ENEISAQTAEVESSDS----WNSKTVKMLSDDSAFAEETQHVDLVSTSATKHEDYAEEQT 3331
Query: 320 LQQEQDIDRISNTVVGATENVKDANEQIKQAIQRN 216
L QE+ ID I+ ATE+ D +++N
Sbjct: 3332 LSQEE-IDHIARITAMATEDNTDLQTLPTPQVRQN 3365
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 31.1 bits (67), Expect = 0.90
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = -1
Query: 509 DLSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMT--EEVKQIESKVLHIAELQEI 336
D SENE+A + + +EL+M +ENV L L +T + Q E+ L + +L+E+
Sbjct: 339 DASENELASFRQKEKELIDELRMATNENVDLEELLKGVTNGKAGLQFENNCL-VGKLEEL 397
Query: 335 -FTEKVLQQEQDIDRISNTVVGATENVKDANEQIKQ 231
F + +QD D + E + A E++ Q
Sbjct: 398 SFVSD--RNKQDADNARAQLEEEREKHRLATEKLHQ 431
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 30.7 bits (66), Expect = 1.2
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Frame = -1
Query: 512 LDLSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEV----KQIESKVLHIAEL 345
L+L+E A +E ++ S+E+++ + V+ LNE+ EE+ K KV+ L
Sbjct: 275 LELAETVQA--KEEWQVKSQEMEIQNKQLVEELNEVQKKLEEIENSQKTFHQKVVSTLNL 332
Query: 344 QEIFTEKVLQQEQD-------IDRISNTVVGATE---NVKDANEQIKQAIQR 219
E + + +EQD +D + +V E ++K NE +K+ +Q+
Sbjct: 333 DEEYFQNP-DEEQDGSLSQFNMDVLEQEIVKYQEKCISLKQENEILKEKLQQ 383
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/112 (24%), Positives = 41/112 (36%)
Frame = -1
Query: 731 DSVVDLIDAYLKAVCKVHSELKAMRVKRALDMRKLSRLELPATKSSIPNPFTLDKVXXXX 552
D + DL + L ELK M V+ ++ + +EL A I N T +K
Sbjct: 501 DQITDLDERGLTLQTGNVDELKEMHVRLQEELISIEDMEL-ALNEEIDNLETEEKKIDQE 559
Query: 551 XXXXXXXXXXXXNLDLSENEMAIMSDEGELTSEELQMFESENVQLLNELNSM 396
E + DE S E+Q E+ + NEL+S+
Sbjct: 560 LAGVGKNVDSDGLRQELEERQKRLEDEAPARSHEMQQLEANVASIRNELHSI 611
>AL132862-3|CAB70225.1| 294|Caenorhabditis elegans Hypothetical
protein Y73F8A.6 protein.
Length = 294
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -1
Query: 350 ELQEIFTEKVLQQEQDIDRISNTVVGAT-ENVKDANEQIKQ 231
+++E E V+++ +D+ +V AT EN KD NE+IKQ
Sbjct: 46 DVKEGNDEVVIREYDSVDQCKKSVEMATAENKKDLNEEIKQ 86
>Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical
protein F07A11.2b protein.
Length = 712
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -1
Query: 431 ENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVL 318
E + LN+L + EV Q++ KVL IA ++I+ EK L
Sbjct: 535 EIIDALNDLPELIREVLQLDEKVLDIA--KQIYKEKSL 570
>Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical
protein F07A11.2a protein.
Length = 725
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -1
Query: 431 ENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVL 318
E + LN+L + EV Q++ KVL IA ++I+ EK L
Sbjct: 548 EIIDALNDLPELIREVLQLDEKVLDIA--KQIYKEKSL 583
>X59156-1|CAA41870.1| 77|Caenorhabditis elegans transposase
protein.
Length = 77
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 327 FSEYFLKFCNV*YFAFNLFNFFCHTV*FI*QLYILRL 437
FS YFL F +F FN+F F V F+ ++ +L+L
Sbjct: 41 FSAYFLNFFQFIFFFFNIFQLF--YVVFLFEILVLKL 75
>U23510-12|AAK71391.2| 212|Caenorhabditis elegans Hypothetical
protein R12C12.7 protein.
Length = 212
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = -1
Query: 500 ENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLH 357
E E S E E T EE ++FESENV+ +N +S+ + ++ + +H
Sbjct: 60 EEESYDDSKETEETEEEDEIFESENVE-MNVRDSLWRFLSDVDLRRMH 106
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/90 (18%), Positives = 45/90 (50%)
Frame = -1
Query: 482 MSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQD 303
M++E +EE ++ E+E + + S E ++ ++ + E E+ E+
Sbjct: 852 MAEEMIKMAEEQKVLEAEAKKAESARKSQEEAYAKLSAERSKLLEALELTQGGSAAIEEK 911
Query: 302 IDRISNTVVGATENVKDANEQIKQAIQRNA 213
+ R+++ +++ DAN+++ + ++NA
Sbjct: 912 LTRLNSARQEVEKSLNDANDRLSEHEEKNA 941
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/90 (18%), Positives = 45/90 (50%)
Frame = -1
Query: 482 MSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQD 303
M++E +EE ++ E+E + + S E ++ ++ + E E+ E+
Sbjct: 852 MAEEMIKMAEEQKVLEAEAKKAESARKSQEEAYAKLSAERSKLLEALELTQGGSAAIEEK 911
Query: 302 IDRISNTVVGATENVKDANEQIKQAIQRNA 213
+ R+++ +++ DAN+++ + ++NA
Sbjct: 912 LTRLNSARQEVEKSLNDANDRLSEHEEKNA 941
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 506 LSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQI 375
+S+ I+S T EEL FE+E ++ + EL+ + VK +
Sbjct: 1563 MSDKISRILSVPSSFTEEELDDFEAEKMKGIRELDMIGHTVKML 1606
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 506 LSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQI 375
+S+ I+S T EEL FE+E ++ + EL+ + VK +
Sbjct: 1569 MSDKISRILSVPSSFTEEELDDFEAEKMKGIRELDMIGHTVKML 1612
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 506 LSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQI 375
+S+ I+S T EEL FE+E ++ + EL+ + VK +
Sbjct: 1569 MSDKISRILSVPSSFTEEELDDFEAEKMKGIRELDMIGHTVKML 1612
>Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical
protein T09A5.10 protein.
Length = 821
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/90 (22%), Positives = 46/90 (51%)
Frame = -1
Query: 506 LSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTE 327
L+E+ M + S++ L +++ EN L +L ++TE+ ++ + + +L +
Sbjct: 296 LNESRMTLRSEQRSLEEADIK---KEN--LTAKLKTVTEDNGKLMKQARELRDLNDYEFA 350
Query: 326 KVLQQEQDIDRISNTVVGATENVKDANEQI 237
+ QQEQ+ ++ T+ + + D EQ+
Sbjct: 351 RFRQQEQE---LTETLRATQDQMADLQEQL 377
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/90 (18%), Positives = 45/90 (50%)
Frame = -1
Query: 482 MSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQD 303
M++E +EE ++ E+E + + S E ++ ++ + E E+ E+
Sbjct: 852 MAEEMIKMAEEQKVLEAEAKKAESARKSQEEAYAKLSAERSKLLEALELTQGGSAAIEEK 911
Query: 302 IDRISNTVVGATENVKDANEQIKQAIQRNA 213
+ R+++ +++ DAN+++ + ++NA
Sbjct: 912 LTRLNSARQEVEKSLNDANDRLSEHEEKNA 941
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/80 (21%), Positives = 34/80 (42%)
Frame = -1
Query: 476 DEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQDID 297
D+ + E Q + E + EL + + + KV H+AE E FT ++++
Sbjct: 642 DQFKSAFENEQEYGKEKSAKIRELEAQNKTLLSEMEKVKHVAENLEAFTSDKDNLLEELE 701
Query: 296 RISNTVVGATENVKDANEQI 237
+ + + + NE+I
Sbjct: 702 SKNKNIEHLKQEIAQLNEKI 721
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/79 (21%), Positives = 38/79 (48%)
Frame = -1
Query: 446 QMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQDIDRISNTVVGAT 267
Q+ E+ ++++ L EE+KQ+ + + ++ E VLQ E D+ ++++
Sbjct: 401 QLPEATSMEIKEALEGENEEMKQLAESIQSMLVERKTAEEAVLQLEADMTIKNSSIKNLQ 460
Query: 266 ENVKDANEQIKQAIQRNAG 210
+ +KQ ++R G
Sbjct: 461 VELATLESTVKQ-LERQKG 478
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/79 (21%), Positives = 38/79 (48%)
Frame = -1
Query: 446 QMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQDIDRISNTVVGAT 267
Q+ E+ ++++ L EE+KQ+ + + ++ E VLQ E D+ ++++
Sbjct: 401 QLPEATSMEIKEALEGENEEMKQLAESIQSMLVERKTAEEAVLQLEADMTIKNSSIKNLQ 460
Query: 266 ENVKDANEQIKQAIQRNAG 210
+ +KQ ++R G
Sbjct: 461 VELATLESTVKQ-LERQKG 478
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 506 LSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQI 375
+S+ I+S T EEL FE+E ++ + EL+ + VK +
Sbjct: 1569 MSDKISRILSVPSSFTEEELDDFEAEKMKGIRELDMIGHTVKML 1612
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/79 (21%), Positives = 38/79 (48%)
Frame = -1
Query: 446 QMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQDIDRISNTVVGAT 267
Q+ E+ ++++ L EE+KQ+ + + ++ E VLQ E D+ ++++
Sbjct: 446 QLPEATSMEIKEALEGENEEMKQLAESIQSMLVERKTAEEAVLQLEADMTIKNSSIKNLQ 505
Query: 266 ENVKDANEQIKQAIQRNAG 210
+ +KQ ++R G
Sbjct: 506 VELATLESTVKQ-LERQKG 523
>AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein.
Length = 821
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/90 (22%), Positives = 46/90 (51%)
Frame = -1
Query: 506 LSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTE 327
L+E+ M + S++ L +++ EN L +L ++TE+ ++ + + +L +
Sbjct: 296 LNESRMTLRSEQRSLEEADIK---KEN--LTAKLKTVTEDNGKLMKQARELRDLNDYEFA 350
Query: 326 KVLQQEQDIDRISNTVVGATENVKDANEQI 237
+ QQEQ+ ++ T+ + + D EQ+
Sbjct: 351 RFRQQEQE---LTETLRATQDQMADLQEQL 377
>AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical
protein Y51F10.4 protein.
Length = 598
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Frame = -1
Query: 476 DEGELTSEELQMFESENVQLLN---ELNSMTEEVKQIESK---------VLHIAELQEIF 333
D GE+ EEL+ ES ++L+ +++ +++ ++ +K ++ + E Q+I
Sbjct: 470 DSGEIRHEELKSLESLEEKVLDANLNISAKLDDISELAAKGNDTEAVKMLVEMKEQQKIQ 529
Query: 332 TEKVLQQEQ---DIDRISNTVVGATENVKDANEQIK 234
E +++QEQ +++ S + AT + A+E K
Sbjct: 530 QELIVRQEQIVAQLNKKSEILANATAEGEAASEAAK 565
>Z83230-8|CAC42303.1| 291|Caenorhabditis elegans Hypothetical
protein F56A8.7b protein.
Length = 291
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 422 QLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQDIDRISNTVVGATENVKDANE 243
Q L ++ + ++ ++ES + + ++ V Q + +DRI V A E V A
Sbjct: 191 QTLADIEARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFVDRAVA 250
Query: 242 QIKQAIQ 222
K+A+Q
Sbjct: 251 DTKKAVQ 257
>Z83230-7|CAB05747.1| 291|Caenorhabditis elegans Hypothetical
protein F56A8.7a protein.
Length = 291
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 422 QLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQDIDRISNTVVGATENVKDANE 243
Q L ++ + ++ ++ES + + ++ V Q + +DRI V A E V A
Sbjct: 191 QTLADIEARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFVDRAVA 250
Query: 242 QIKQAIQ 222
K+A+Q
Sbjct: 251 DTKKAVQ 257
>Z78544-2|CAB01758.1| 368|Caenorhabditis elegans Hypothetical
protein K04G11.3 protein.
Length = 368
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/94 (19%), Positives = 45/94 (47%)
Frame = -1
Query: 497 NEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVL 318
NEM + S +++ + EN+ L N + + ++ Q+ ++ EI ++
Sbjct: 200 NEMTSPEPTYKELSNTVKLLQQENINLKNSVQTRKDQFSQLYAQKERYESTNEIEINRLK 259
Query: 317 QQEQDIDRISNTVVGATENVKDANEQIKQAIQRN 216
+ ++ ++ ++ EN + A EQ+ +++RN
Sbjct: 260 KCVEEEIELNRQLI--AENTRLATEQV--SVKRN 289
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/89 (19%), Positives = 40/89 (44%)
Frame = -1
Query: 506 LSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTE 327
+ E ++A+ SD+ +Q + ++ +L ++ ++ Q+E + +AE E
Sbjct: 288 IGEKDLALSSDDYGRDLNNVQALQRKHEGTERDLAALEGKMLQLEKEAHKLAETHPDRAE 347
Query: 326 KVLQQEQDIDRISNTVVGATENVKDANEQ 240
+ Q+ D N + ++ KD E+
Sbjct: 348 AIHQKNDDTKAAWNALKEKAQHRKDGLER 376
>AF047885-1|AAD10538.1| 291|Caenorhabditis elegans UNC-64 syntaxin
class B protein.
Length = 291
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 422 QLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQDIDRISNTVVGATENVKDANE 243
Q L ++ + ++ ++ES + + ++ V Q + +DRI V A E V A
Sbjct: 191 QTLADIEARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFVDRAVA 250
Query: 242 QIKQAIQ 222
K+A+Q
Sbjct: 251 DTKKAVQ 257
>AB008844-1|BAA23586.1| 291|Caenorhabditis elegans syntaxin C
protein.
Length = 291
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 422 QLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQDIDRISNTVVGATENVKDANE 243
Q L ++ + ++ ++ES + + ++ V Q + +DRI V A E V A
Sbjct: 191 QTLADIEARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFVDRAVA 250
Query: 242 QIKQAIQ 222
K+A+Q
Sbjct: 251 DTKKAVQ 257
>AB008843-1|BAA23585.1| 291|Caenorhabditis elegans syntaxin B
protein.
Length = 291
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 422 QLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQDIDRISNTVVGATENVKDANE 243
Q L ++ + ++ ++ES + + ++ V Q + +DRI V A E V A
Sbjct: 191 QTLADIEARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFVDRAVA 250
Query: 242 QIKQAIQ 222
K+A+Q
Sbjct: 251 DTKKAVQ 257
>AB008842-1|BAA23584.1| 291|Caenorhabditis elegans syntaxin A
protein.
Length = 291
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 422 QLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVLQQEQDIDRISNTVVGATENVKDANE 243
Q L ++ + ++ ++ES + + ++ V Q + +DRI V A E V A
Sbjct: 191 QTLADIEARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFVDRAVA 250
Query: 242 QIKQAIQ 222
K+A+Q
Sbjct: 251 DTKKAVQ 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,448,491
Number of Sequences: 27780
Number of extensions: 198450
Number of successful extensions: 746
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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