Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_A05
(519 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 67 2e-12
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 64 1e-11
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 58 8e-10
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 56 4e-09
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 54 1e-08
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 52 4e-08
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 39 5e-04
SPAP8A3.14c |||mitochondrial inner membrane protein |Schizosacch... 27 1.7
SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr ... 25 5.1
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 25 5.1
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 25 6.8
SPAC17H9.20 |psc3|SPAC607.01|mitotic cohesin complex, non-SMC su... 25 6.8
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 25 9.0
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 25 9.0
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 25 9.0
SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr 2... 25 9.0
SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces po... 25 9.0
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 66.9 bits (156), Expect = 2e-12
Identities = 30/90 (33%), Positives = 51/90 (56%)
Frame = -3
Query: 274 IVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESIIAESKGKVVLAKVDIDE 95
+ ++ + +FK V K+ VVVDFFATWC PC+ + P+ E + + KVD+D+
Sbjct: 2 VKQVSDSSEFKSIVCQDKL-VVVDFFATWCGPCKAIAPKFEQ-FSNTYSDATFIKVDVDQ 59
Query: 94 QTDLALDYEVSSVPXLVAIKNGKVQNRLVG 5
+++A + V ++P KNG+ +VG
Sbjct: 60 LSEIAAEAGVHAMPSFFLYKNGEKIEEIVG 89
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 64.1 bits (149), Expect = 1e-11
Identities = 32/107 (29%), Positives = 59/107 (55%)
Frame = -3
Query: 325 KNYGFLRNFSLTASKNDIVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESI 146
+++ R+F+ + + ++S D+ ++ KV VVDF+A WC PC+ L P LE
Sbjct: 2 RSFALRRSFTSSRILRKVNAVESFGDYNTRISADKV-TVVDFYADWCGPCKYLKPFLEK- 59
Query: 145 IAESKGKVVLAKVDIDEQTDLALDYEVSSVPXLVAIKNGKVQNRLVG 5
++E K V+ D+ +D+A V ++P +V + G+ +R+VG
Sbjct: 60 LSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKGQELDRIVG 106
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 58.0 bits (134), Expect = 8e-10
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = -3
Query: 274 IVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESI--IAESKGKVVLAKVDI 101
+V++QS ++ + + SK +++F+ATWC C+ L P E + + E V++ K+D
Sbjct: 22 VVELQSLNELENTIRASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDA 81
Query: 100 DEQTDLALDYEVSSVPXLV 44
D +D+A Y ++ P L+
Sbjct: 82 DTHSDVADKYHITGFPTLI 100
Score = 48.4 bits (110), Expect = 6e-07
Identities = 23/80 (28%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = -3
Query: 280 NDIVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESI--IAESKGKVVLAKV 107
+++V++ S + F + V++ K V+V+F+A WC C+ L P E++ + +++ V + K+
Sbjct: 140 SNVVELDSLN-FDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKI 198
Query: 106 DIDEQTDLALDYEVSSVPXL 47
+ D D+ +EV+S P +
Sbjct: 199 NADVFADIGRLHEVASFPTI 218
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 55.6 bits (128), Expect = 4e-09
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = -3
Query: 214 VVVDFFATWCNPCRLLTPRLESIIAE-SKGKVVLAKVDIDEQTDLALDYEVSSVPXLVAI 38
+ VD +A WC PC+ ++P + ++ + K V AKV++DEQ +A V ++P V
Sbjct: 22 LAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFF 81
Query: 37 KNGKVQNRLVG 5
+NGK + L G
Sbjct: 82 ENGKQIDMLTG 92
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 54.0 bits (124), Expect = 1e-08
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -3
Query: 238 KVINSKVPVVVDFFATWCNPCRLLTPRLESIIAE-SKGKVVLAKVDIDEQTDLALDYEVS 62
++I + ++V F+A WC C+ L P ES E K + L +VD E+ DL +Y +
Sbjct: 34 ELITADKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIR 93
Query: 61 SVPXLVAIKNGK 26
P L KNGK
Sbjct: 94 GYPTLNVFKNGK 105
Score = 48.4 bits (110), Expect = 6e-07
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = -3
Query: 310 LRNFSLTASKNDIVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESIIAE-- 137
+++ + S+ D+V + + D+F + V++ V+V+F+A WC C+ L P E + E
Sbjct: 345 IKSQPIPESQEDLVVLVA-DNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYS 403
Query: 136 SKGKVVLAKVDIDEQTDLALDYEVSSVPXLVAIK-NGKV 23
VV+AK+D E D+++ +S P ++ K N KV
Sbjct: 404 DDSNVVVAKIDATE-NDISV--SISGFPTIMFFKANDKV 439
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 52.4 bits (120), Expect = 4e-08
Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = -3
Query: 271 VKIQSTDDFKEKVINSKVPVVV-DFFATWCNPCRLLTPRLESIIAESKGKVVLAKVDIDE 95
V+I + F+E + N K +++ +F+A W PC+ + + ++K V L K++ ++
Sbjct: 3 VEITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFL-KIEAEK 61
Query: 94 QTDLALDYEVSSVPXLVAIKNGKVQNRLVG 5
+D+A ++V++VP V I KV R+ G
Sbjct: 62 FSDIAESFDVNAVPLFVLIHGAKVLARISG 91
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 38.7 bits (86), Expect = 5e-04
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -3
Query: 238 KVINSKVPVVVDFFATWCNPCRLLTPRLESIIAESKGKVVLAKVDIDEQTDLAL--DYEV 65
K + +K P +V F+A WC C+ L P + + + + + VD D + A+ Y+V
Sbjct: 43 KFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQV 102
Query: 64 SSVPXL 47
P +
Sbjct: 103 QGFPTI 108
>SPAP8A3.14c |||mitochondrial inner membrane protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 677
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 343 RNSTLKKNYGFLRNFSLTASKNDIVKIQSTDDFKEKVI 230
++S L + GFL NFSL S + K+ S + E+ +
Sbjct: 580 QDSQLNASSGFLTNFSLKDSTDRFYKVLSYEKVSERFV 617
>SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 25.4 bits (53), Expect = 5.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 307 RNFSLTASKNDIVKIQSTDDFKEKVINSKVPV 212
RN + + D+ Q ++F+EK++N +PV
Sbjct: 72 RNPTGDVTATDVYSSQYLNNFQEKLLNGSIPV 103
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.4 bits (53), Expect = 5.1
Identities = 18/92 (19%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = -3
Query: 418 PNNLQYCI-VHCFYKMLTKNITNLFIRNSTLKKNYGFLRNFSLTASKNDIVKIQSTDDFK 242
P ++C+ + + LT + LF+ L+ N + NFS + +++D + +
Sbjct: 217 PLTQKFCVQLQKLFADLTVSDQMLFLNQLLLEHNTKYPTNFSYSTARDDRITGSLATLLR 276
Query: 241 EKVINSKVPVVVDFFATWCNPCRLLTPRLESI 146
++ +++F+ W P L+ R+E +
Sbjct: 277 LNFSSTHFLRLIEFY--WGVPTNLIIKRVEVV 306
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 282 FDAVREKFLKNP*FFFNVLFRMNKLVIFLVSI 377
FD + FLKN F + L+R++ L +FL S+
Sbjct: 706 FDYDPDLFLKNIPVFVDGLYRVDYLDLFLTSL 737
>SPAC17H9.20 |psc3|SPAC607.01|mitotic cohesin complex, non-SMC subunit
Psc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 354 LVIFLVSIL*KQCTMQYCKLFGHYRP 431
+V+ L + + + + Q+C+L GHY P
Sbjct: 926 IVVSLSNTITPEFSQQFCELRGHYGP 951
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -3
Query: 175 RLLTPRLESIIAESKGKVVLAKVDIDEQTDLALD 74
+LLTP SIIA G + DI+E DL LD
Sbjct: 409 QLLTP--VSIIASLHGNKEIGVQDIEECNDLFLD 440
>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 24.6 bits (51), Expect = 9.0
Identities = 7/30 (23%), Positives = 18/30 (60%)
Frame = +3
Query: 90 VCSSMSTFAKTTLPLLSAIIDSRRGVSSLH 179
+CSS F + +P+L +++ + + ++H
Sbjct: 257 ICSSQLPFVEQYMPILPLLLERLKSLQNMH 286
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1778
Score = 24.6 bits (51), Expect = 9.0
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 132 LLSAIIDSRRGVSSLHGLHHVAKKSTTTGTLLLITFSLKSSVLWIFTMSFFD 287
LL +D L G H + +S+ T L + S S++W T FD
Sbjct: 1230 LLEYQLDQTEVYLDLSGTHAASPRSSMTVKPLSLCSSGYESIVWDLTSILFD 1281
>SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 24.6 bits (51), Expect = 9.0
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +3
Query: 27 FPFFIATKXGTELTS*SNAKSVCSSMSTFAK---TTLPLLSAIIDS-RRGVSSLHGL 185
FP IA E S VCS+ ST K TT L+ A + R V S+H L
Sbjct: 28 FPIKIAVDVAKEYLSTKRVALVCSARSTDTKAEGTTTRLIRATEAALRPAVGSVHDL 84
>SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 508
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 277 RFSTQLERNFSKTHNFFLMYYFE 345
+ + +L+R + T N+F +Y+FE
Sbjct: 189 KLALELQRAYINTMNWFYLYHFE 211
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,072,084
Number of Sequences: 5004
Number of extensions: 40910
Number of successful extensions: 122
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 210309424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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