Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_A03
(758 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 153 2e-38
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 150 2e-37
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 124 2e-29
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 122 4e-29
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 112 6e-26
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 97 2e-21
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 40 5e-04
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 34 0.019
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 34 0.025
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 33 0.044
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 33 0.058
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 31 0.13
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 31 0.24
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 27 2.2
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 27 2.9
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 3.8
SPAC25G10.08 |||translation initiation factor eIF3b |Schizosacch... 25 8.9
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 8.9
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 25 8.9
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 153 bits (372), Expect = 2e-38
Identities = 77/128 (60%), Positives = 94/128 (73%), Gaps = 9/128 (7%)
Frame = -2
Query: 757 YPDTDVILMCXSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRK 578
YPD+ VIL+C +VDSPDSL+N+ EKW EV HFC ++PI+LV K DLRNDP I EL K
Sbjct: 75 YPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRNDPKIIEELSK 134
Query: 577 MKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL-----QVK----KK 425
Q PV +EG+A+A+KI A+ YLECSAK+ EGVREVFE+ATRAA+ +VK K
Sbjct: 135 TNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATRAAMLKHKPKVKPSSGTK 194
Query: 424 KKTRCSLL 401
KK RC LL
Sbjct: 195 KKKRCILL 202
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 150 bits (363), Expect = 2e-37
Identities = 72/126 (57%), Positives = 90/126 (71%), Gaps = 7/126 (5%)
Frame = -2
Query: 757 YPDTDVILMCXSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRK 578
YPD+ V+L+C SVD+P+SL+N+ EKW EV HFC N+PI+LVG K DLRNDP TI EL K
Sbjct: 75 YPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRNDPKTIEELSK 134
Query: 577 MKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL-------QVKKKKK 419
Q+P+ +EG+ +A+KI A+ YLECSAK EGV EVFETA RA++ K KKK
Sbjct: 135 TSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAARASMLKFKPASVPKTKKK 194
Query: 418 TRCSLL 401
C LL
Sbjct: 195 KHCILL 200
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 124 bits (298), Expect = 2e-29
Identities = 56/121 (46%), Positives = 81/121 (66%), Gaps = 2/121 (1%)
Frame = -2
Query: 757 YPDTDVILMCXSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRK 578
YP TDV L+C SV SP S EN+ EKW PEV H CP VP ++VG + DLR+DP+ +L +
Sbjct: 72 YPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDPSVQQKLAR 131
Query: 577 MKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ--VKKKKKTRCSL 404
Q P+ ++G +A ++ A Y+ECSA +++G++ VF+ A AAL V KKK++C +
Sbjct: 132 QHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAIVAALDPPVPHKKKSKCLV 191
Query: 403 L 401
L
Sbjct: 192 L 192
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 122 bits (295), Expect = 4e-29
Identities = 58/123 (47%), Positives = 80/123 (65%), Gaps = 4/123 (3%)
Frame = -2
Query: 757 YPDTDVILMCXSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRK 578
Y +IL+ ++DSPDSLEN+ KW E+ CPNVP ILVG K DLR+DP I E+R+
Sbjct: 77 YAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDPVAIEEMRR 136
Query: 577 MKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVK----KKKKTRC 410
Q VK Q+ +A++I A Y+ECS+ + +GV +VFE ATRAAL V+ K T+C
Sbjct: 137 RNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFEAATRAALTVRDSENDKSSTKC 196
Query: 409 SLL 401
++
Sbjct: 197 CII 199
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 112 bits (269), Expect = 6e-26
Identities = 58/122 (47%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Frame = -2
Query: 757 YPDTDVILMCXSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRK 578
YP+++VIL+C S+D P SL N+ EKW PEV+HFCP PI+LVG K DLR D LR
Sbjct: 85 YPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKDRNATEVLRT 144
Query: 577 MKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKK---KKTRCS 407
PV Q+ +++A +NA Y+ECSAK GV EVF+ A L +KK K C
Sbjct: 145 QGLTPVTYQQAQSVALSMNA-PYVECSAKENTGVNEVFQLA--VGLTIKKSFSFSKKSCV 201
Query: 406 LL 401
+L
Sbjct: 202 IL 203
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 97.1 bits (231), Expect = 2e-21
Identities = 52/111 (46%), Positives = 66/111 (59%)
Frame = -2
Query: 757 YPDTDVILMCXSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRK 578
Y DT VI++C +VDS DSLEN+ KW PEV CP V ++LV K DLR +E +
Sbjct: 82 YSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRG----ADEEQV 137
Query: 577 MKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKK 425
+ + +EG A A+KINA YLECSAK GV E F A R AL + +
Sbjct: 138 DHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAARVALAAQPR 188
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 39.5 bits (88), Expect = 5e-04
Identities = 32/106 (30%), Positives = 52/106 (49%)
Frame = -2
Query: 739 ILMCXSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEPV 560
IL+ V S +N+ ++ +H NV IL+GNK D + Q V
Sbjct: 85 ILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCED------------QRQV 132
Query: 559 KPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK 422
++G+A+A+++ +LE SAK+ V E F T R ++KK+K
Sbjct: 133 SFEQGQALADELGV-KFLEASAKTNVNVDEAFFTLAR---EIKKQK 174
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 34.3 bits (75), Expect = 0.019
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -2
Query: 736 LMCXSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 611
++ V S + +N+P W V+ C N+PI+L GNK D++
Sbjct: 86 IIMFDVTSRITYKNVPHWWRDLVR-VCENIPIVLCGNKVDVK 126
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 33.9 bits (74), Expect = 0.025
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Frame = -2
Query: 757 YPDTDVILMCXSVDSPDSLENIPEKWTPE-VKHFCPN----VPIILVGNKKDLRNDPATI 593
Y D ++ V++ S E + + W E + P+ P IL+GNK D +
Sbjct: 78 YRGADCCVLVYDVNNSKSFETL-DSWRDEFLIQASPSNPETFPFILLGNKVD-------V 129
Query: 592 NELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ 437
E ++M V + A + Y E SAK V+E FET + AL+
Sbjct: 130 EEQKRM----VSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALE 177
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 33.1 bits (72), Expect = 0.044
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = -2
Query: 649 VPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRE 470
VPI++VGNK DL Q V +EG+A+A + A+ E SA+ E V
Sbjct: 112 VPIVVVGNKSDLH------------MQRAVTAEEGKALANEWKC-AWTEASARHNENVAR 158
Query: 469 VFE 461
FE
Sbjct: 159 AFE 161
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 32.7 bits (71), Expect = 0.058
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Frame = -2
Query: 739 ILMCXSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRNDPATINELRKMKQEP 563
I++ V DS N+ ++W E+ + V +LVGNK D+ + ++
Sbjct: 84 IIIVYDVTDQDSFNNV-KQWLQEIDRYAVEGVNRLLVGNKSDM------------VDKKV 130
Query: 562 VKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKK 425
V+ + A+ +N +LE SAK V + F T +R Q+K++
Sbjct: 131 VEYSVAKEFADSLN-IPFLETSAKDSTNVEQAFLTMSR---QIKER 172
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 31.5 bits (68), Expect = 0.13
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = -2
Query: 757 YPDTDVILMCXSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRNDPATINELR 581
Y + + ++ + SLE + W E++ P + I L GNK DL +
Sbjct: 85 YRNANCAIVVYDITQAASLEKA-KSWIKELQRQAPEGIVIALAGNKLDLAQE-------- 135
Query: 580 KMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKK 425
+ V+ + A A + N + E SAK+ E V E+F TA L ++ K
Sbjct: 136 ---RRAVEKADAEAYAAEANLL-FFETSAKTAENVNELF-TAIAKKLPLEDK 182
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 30.7 bits (66), Expect = 0.24
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = -2
Query: 757 YPDTDVILMCXSVDSPDSLENIPEKWTPEVKHFCPN----VPIILVGNKKDLRNDPATIN 590
Y D ++ +V++ S +++ E W E + P I+VGN+ D ++
Sbjct: 78 YRGADCCVIVYNVNNSKSFDSV-ENWRQEFLYQTSQDECAFPFIIVGNQIDKDASKRAVS 136
Query: 589 ELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ 437
R + + K + G M + E SAK V ++FET +R AL+
Sbjct: 137 LHRAL--DYCKSKHGSNMI-------HFEASAKENTNVTDLFETVSRLALE 178
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 27.5 bits (58), Expect = 2.2
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = -2
Query: 646 PIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREV 467
P++LV NK DL + V EG +A+ ++ Y+E SAK + V E
Sbjct: 115 PVVLVANKCDLE------------AERVVSRAEGEQLAKSMHCL-YVETSAKLRLNVEEA 161
Query: 466 FETATRAALQVKKKKK 419
F + R + K ++
Sbjct: 162 FYSLVRTIRRYNKSEE 177
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 27.1 bits (57), Expect = 2.9
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = -2
Query: 634 VGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETA 455
VG ++ A+ +K+K K + + A E KS E ++V ETA
Sbjct: 45 VGGVYHVQQKKASHKRSKKLKAHQDKAESKVNEGKNEAAKVVKEEDLKSSETGKDV-ETA 103
Query: 454 TRAALQVKKKKKTR 413
AA KKKKK +
Sbjct: 104 AAAAAAAKKKKKNK 117
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 736 LMCXSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK-KDLRN 608
++C S E + W P + NVPI+L NK +DL N
Sbjct: 77 VICLVYSDNYSYERVSIFWLPYFRSLGVNVPIVLCENKSEDLDN 120
>SPAC25G10.08 |||translation initiation factor eIF3b
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 725
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 709 DSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 611
DS E + WTPE+ + V +I + +K +R
Sbjct: 367 DSKEQLLAYWTPEITNQPARVALISIPSKSTIR 399
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 25.4 bits (53), Expect = 8.9
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = -2
Query: 595 INELRKMKQEPVKPQEGRAMAEKINAF 515
+++ +K K+ P KP+E + + +N+F
Sbjct: 388 VDDNKKKKKGPAKPKEKATLGKTVNSF 414
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -2
Query: 598 TINELRKMKQEP-VKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK 422
T +E++ K+EP +K QEG + EK+ + + AK + E + + +K
Sbjct: 211 TKDEIKSEKKEPEIKKQEGGSSTEKVGQPSSSDDKAKGSTSKDQPSEEEEKTSDIQDRKI 270
Query: 421 KT 416
KT
Sbjct: 271 KT 272
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,995,483
Number of Sequences: 5004
Number of extensions: 59133
Number of successful extensions: 181
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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