Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_P23
         (321 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   7.3  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    19   9.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    19   9.7  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    19   9.7  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 237 YCCRLYFNQFIIPLF*IVYSFCL 169
           Y   + F  FIIPL  ++  +C+
Sbjct: 237 YFLTIIFLFFIIPLIILLILYCI 259


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 84  TLYV*GDYTIRTMSTK 131
           TLYV   YT+ T  TK
Sbjct: 74  TLYVQNIYTVLTALTK 89


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 84  TLYV*GDYTIRTMSTK 131
           TLYV   YT+ T  TK
Sbjct: 74  TLYVQNIYTVLTALTK 89


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 111 LCNHLKRTKFTVC*LKI 61
           LCN   +TK  +  LKI
Sbjct: 216 LCNEANKTKILLVGLKI 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,264
Number of Sequences: 336
Number of extensions: 885
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6048897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)