Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_P22
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    31   0.008
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   3.8  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 31.1 bits (67), Expect = 0.008
 Identities = 12/40 (30%), Positives = 27/40 (67%)
 Frame = +3

Query: 498 SLILHLILTPYLVDVELLSL*LMHRMIIKMLWINYNLLSL 617
           S +LHL++TPY + +E+ +   +  +++++ WI  +L+ L
Sbjct: 277 SCLLHLVVTPYYLLIEVCNAGYLPFILLQVAWIVLHLIRL 316


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
 Frame = +2

Query: 266 EQNGDGDSSSLQDDHKPRILL---MGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKD 436
           +QNG  + ++L+  H P++ L   +G    G S    +V  K       F+ S    V  
Sbjct: 78  DQNGFRNFTNLKKTH-PKVKLQVAVGGWAEGGSKYSAMVAEKS--RRDAFIRS----VIS 130

Query: 437 DINNSSFVQFQI-WDFPGQIDFFDPTFDSDTIFGGCGALVFVIDAQ 571
            +N   F  F + W++PG  D      D D  F   G L    D +
Sbjct: 131 FMNQYEFDGFDLDWEYPGAADRGGSFSDKDKFFYFVGELRRAFDKE 176


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 599 IYPKHLDNHPVHQLQRQELHIHQIWCQNQM*DQRSLSA 486
           I+P  LD   ++ L   +L++HQ   Q  M     LSA
Sbjct: 293 IHPSKLDVEQMNLLHSNDLNMHQQHHQQNM-SHEELSA 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,378
Number of Sequences: 336
Number of extensions: 3328
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)