Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_P22
(648 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces p... 152 5e-38
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 44 3e-05
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 37 0.002
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 30 0.33
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 29 0.76
SPCC1442.09 |trp3||anthranilate synthase component I|Schizosacch... 28 1.0
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 28 1.3
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.3
SPAC13G7.06 |met16||phosphoadenosine phosphosulfate reductase|Sc... 27 3.1
SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|... 26 5.4
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 26 5.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 5.4
SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 25 7.1
SPCC4G3.04c |coq5||C-methytransferase |Schizosaccharomyces pombe... 25 7.1
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 25 9.4
SPAC1071.05 |||S-adenosylmethionine-dependent methyltransferase ... 25 9.4
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po... 25 9.4
SPAC5H10.10 |||NADPH dehydrogenase |Schizosaccharomyces pombe|ch... 25 9.4
>SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 314
Score = 152 bits (368), Expect = 5e-38
Identities = 73/112 (65%), Positives = 89/112 (79%), Gaps = 1/112 (0%)
Frame = +2
Query: 311 KPR-ILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPG 487
KPR I+LMGLRRSGKSSIQKVVF+KM PNETLFLEST+++ +D I SSF+ F +WDFPG
Sbjct: 2 KPRKIILMGLRRSGKSSIQKVVFYKMPPNETLFLESTSKLTQDHI--SSFIDFSVWDFPG 59
Query: 488 QIDFFDPTFDSDTIFGGCGALVFVIDAQDDYQDALDKLQLTVTKAYRVNSNI 643
Q+D FD FD ++IF GAL+FVIDAQDDY DAL +L +TV + +N NI
Sbjct: 60 QVDVFDAAFDFESIFTQVGALIFVIDAQDDYLDALARLHVTVARVVTINPNI 111
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 43.6 bits (98), Expect = 3e-05
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +2
Query: 311 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 490
+ ++LLMG SGKSS++ +VF +T L +T I + + +WD GQ
Sbjct: 2 RKKVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLVLNLWDCGGQ 61
Query: 491 IDFFDPTFDS--DTIFGGCGALVFVIDAQ 571
F + + D IF L++V D +
Sbjct: 62 EAFMENYLSAQRDHIFRNVQVLIYVFDVE 90
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 37.1 bits (82), Expect = 0.002
Identities = 27/95 (28%), Positives = 49/95 (51%)
Frame = +2
Query: 290 SSLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQ 469
S L + + RIL++GL +GK++I +K+ N+++ T + + + ++F
Sbjct: 14 SRLFSNKEMRILMLGLDAAGKTTI----LYKLKLNQSVVTIPTVGFNVETVTYKN-IKFN 68
Query: 470 IWDFPGQIDFFDPTFDSDTIFGGCGALVFVIDAQD 574
+WD GQ D P + F G L+FV+D+ D
Sbjct: 69 VWDVGGQ-DKIRPLWRH--YFTGTKGLIFVVDSAD 100
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 29.9 bits (64), Expect = 0.33
Identities = 25/94 (26%), Positives = 44/94 (46%)
Frame = +2
Query: 293 SLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQI 472
SL + RIL++GL +GK++I +K+ E + T + + + + F +
Sbjct: 11 SLFGKREMRILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYRN-ISFTV 65
Query: 473 WDFPGQIDFFDPTFDSDTIFGGCGALVFVIDAQD 574
WD GQ D P + F ++FV+D+ D
Sbjct: 66 WDVGGQ-DKIRPLWRH--YFQNTQGIIFVVDSND 96
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 28.7 bits (61), Expect = 0.76
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +2
Query: 305 DHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFP 484
+ + R+LL+GL +GK++I K + ++ NE + QI ++ ++F IWD
Sbjct: 14 EREVRVLLLGLDNAGKTTILKCLLNE-DVNE-VSPTFGFQIRTLEVEG---LRFTIWDIG 68
Query: 485 GQ---IDFFDPTFDSDTIFGGCGALVFVIDAQDD 577
GQ +F+ F+S A+++V+D+ DD
Sbjct: 69 GQKTLRNFWKNYFESTE------AIIWVVDSLDD 96
>SPCC1442.09 |trp3||anthranilate synthase component
I|Schizosaccharomyces pombe|chr 3|||Manual
Length = 489
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 542 GALVFVIDAQDDYQDALDKLQLTVT 616
G +VF D QD+Y + L+KL+ VT
Sbjct: 448 GGIVFDSDEQDEYVETLNKLRSNVT 472
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 27.9 bits (59), Expect = 1.3
Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 6/108 (5%)
Frame = +2
Query: 257 GPFEQNGDGDSSSLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKD 436
G Q +S + DH+P I+ S + V + + N + E+ NQ+V D
Sbjct: 354 GAVTQANGIESDFTRVDHEPIIVNNDDENGNNESENEEVIEEDNLNRNVIAEAQNQVVAD 413
Query: 437 DINNSSFVQFQIW------DFPGQIDFFDPTFDSDTIFGGCGALVFVI 562
+ N+ QI DF G ++F C + FV+
Sbjct: 414 EERNAVARAAQIAEADDADDFDGILEFLGLRGPITGFLQNCLVIAFVV 461
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.1 bits (57), Expect = 2.3
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 350 KSSIQKVVFHKMSPNETLFLESTN-QIVKDDINNSSFVQFQIWDFPGQIDFFDPTFDSDT 526
+ S++ H + + ++ST + D+ +F FQ D PG +DF D
Sbjct: 173 RRSLRYTDTHYLERERVMSIKSTPLTLAVSDMKGKTFA-FQCIDTPGHVDFVDEVAAPMA 231
Query: 527 IFGGCGALVFVID 565
I G +V VI+
Sbjct: 232 ISDGVVLVVDVIE 244
>SPAC13G7.06 |met16||phosphoadenosine phosphosulfate
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 266
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 180 WTLPRL*VIRTIQIVMWGRSPRILPMDLSSKMEMAIALLFKTITNH 317
WTLP L Q G S ++ MD+ SKM+M + L+F +H
Sbjct: 43 WTLPSL-----FQTSALGLSGLVI-MDMLSKMDMNVPLIFINTLHH 82
>SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 287 SSSLQDDHKPRILLMGLRRSGKSSIQKVVFHKM 385
S+S D PR+++ G + SGKSS + + +++
Sbjct: 323 STSKSDYVVPRLMVCGPKGSGKSSFSRYITNRL 355
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 25.8 bits (54), Expect = 5.4
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +2
Query: 287 SSSLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQF 466
SS+ + D K + S+IQ V+FH M E + ++ SF++F
Sbjct: 276 SSAYEKDRKSSEKAASILEKSISAIQTVIFHSMQDTEYRYFADA-----CSTSSKSFLRF 330
Query: 467 QIWD-FPGQIDFF 502
D F G + F
Sbjct: 331 SFLDAFQGGVSQF 343
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/19 (63%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +2
Query: 200 SYQD-DPNCYVGSFPKDFT 253
+Y D D N +GSFPKDFT
Sbjct: 44 TYVDSDGNRKIGSFPKDFT 62
>SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 843
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/21 (47%), Positives = 18/21 (85%), Gaps = 1/21 (4%)
Frame = -2
Query: 161 WELLYIL-IIISVYFKL*STF 102
W L++I+ +I+S+YF+L ST+
Sbjct: 467 WYLVFIVSVILSIYFQLGSTY 487
>SPCC4G3.04c |coq5||C-methytransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 305
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 272 NGDGDSSSLQDDHKPRILLMGLRRSGKS 355
NGD ++ + D P +L +GLRRS K+
Sbjct: 132 NGDRNTRVIVADINPDMLSVGLRRSKKT 159
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 284 DSSSLQDDHKPRILLMGLRRSGKSSIQKVV 373
+++S +D ++LL+G SGKS+I K +
Sbjct: 25 ENASKKDKKIYKVLLLGASDSGKSTISKQI 54
>SPAC1071.05 |||S-adenosylmethionine-dependent methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +2
Query: 452 SFVQFQIWDFPGQIDFFDPTFDSD---TIFGGCGALV 553
+FVQ ++WD Q+ D + +SD + GC LV
Sbjct: 59 TFVQRELWDVKMQLMEQDDSIESDDKLKVLDGCNDLV 95
>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 549
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 599 IYPKH-LDNHPVHQLQRQELHIHQIWCQNQM*DQRSLSA 486
++ +H L N + +RQEL ++C+++M QR L A
Sbjct: 42 LFTEHWLSNLKNRREKRQELAEEAVYCRSEMLSQRKLLA 80
>SPAC5H10.10 |||NADPH dehydrogenase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 392
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 407 LESTNQIVKDDINNSSFVQFQIWDFPGQI 493
+E+ IV+ +N FV Q W+ PG++
Sbjct: 90 VEAWKPIVQAIHDNDCFVFIQFWNLPGEL 118
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,600,334
Number of Sequences: 5004
Number of extensions: 52543
Number of successful extensions: 135
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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