Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_P22
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 31 1.0
08_02_0491 + 17749763-17750143,17750694-17750751,17750846-177508... 30 1.4
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 30 1.4
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 30 1.4
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 30 1.4
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 30 1.4
03_01_0365 - 2839190-2839251,2839637-2839694,2839946-2840032,284... 29 4.2
08_01_0387 - 3426058-3426168,3426279-3426473,3426612-3426724,342... 28 5.6
07_03_1116 - 24084162-24084201,24084481-24084570,24084640-240852... 28 5.6
07_03_0638 + 20196216-20196650,20196810-20196930,20197072-201971... 28 5.6
05_07_0028 + 27153663-27153932,27154966-27155175,27156220-271564... 28 7.4
04_04_1609 + 34760576-34760688,34760781-34760948,34761566-347616... 28 7.4
04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928,999... 27 9.7
03_04_0127 - 17508808-17509029,17509195-17509938,17510004-175102... 27 9.7
01_06_1680 - 39123536-39123628,39123726-39123821,39123941-391240... 27 9.7
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 30.7 bits (66), Expect = 1.0
Identities = 26/95 (27%), Positives = 44/95 (46%)
Frame = +2
Query: 290 SSLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQ 469
S L + RIL++GL +GK++I +K+ E + T + + + + F
Sbjct: 10 SRLFSKKEMRILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFT 64
Query: 470 IWDFPGQIDFFDPTFDSDTIFGGCGALVFVIDAQD 574
+WD GQ D P + F L+FV+D+ D
Sbjct: 65 VWDVGGQ-DKIRPLWRH--YFQNTQGLIFVVDSND 96
>08_02_0491 +
17749763-17750143,17750694-17750751,17750846-17750891,
17750932-17750998,17751100-17751108
Length = 186
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = -3
Query: 550 KSSTSTKYGVRIKCRIKEVYLPGKVPYLKLYKT---AVINVVFNNLIGRF*KQCLIWRHL 380
K+ TS + G + KE+ +V YL L+ + ++ N + ++ C+I RH+
Sbjct: 95 KNGTSVERGFQFCNSFKEIQRDQRVLYLLLHVSKAGSLFNFIVQQFALKYLSDCIIARHV 154
Query: 379 VKYNFLN 359
K N N
Sbjct: 155 CKVNIEN 161
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 317 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQID 496
RIL++GL +GK++I +K+ E + T + + + + F +WD GQ D
Sbjct: 142 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 195
Query: 497 FFDPTFDSDTIFGGCGALVFVIDAQD 574
P + F L+FV+D+ D
Sbjct: 196 KIRPLWRH--YFQNTQGLIFVVDSND 219
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 317 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQID 496
RIL++GL +GK++I +K+ E + T + + + + F +WD GQ D
Sbjct: 19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 72
Query: 497 FFDPTFDSDTIFGGCGALVFVIDAQD 574
P + F L+FV+D+ D
Sbjct: 73 KIRPLWRH--YFQNTQGLIFVVDSND 96
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 317 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQID 496
RIL++GL +GK++I +K+ E + T + + + + F +WD GQ D
Sbjct: 19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 72
Query: 497 FFDPTFDSDTIFGGCGALVFVIDAQD 574
P + F L+FV+D+ D
Sbjct: 73 KIRPLWRH--YFQNTQGLIFVVDSND 96
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 317 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQID 496
RIL++GL +GK++I +K+ E + T + + + + F +WD GQ D
Sbjct: 19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 72
Query: 497 FFDPTFDSDTIFGGCGALVFVIDAQD 574
P + F L+FV+D+ D
Sbjct: 73 KIRPLWRH--YFQNTQGLIFVVDSND 96
>03_01_0365 -
2839190-2839251,2839637-2839694,2839946-2840032,
2840117-2840206,2840575-2840650,2840877-2840971,
2841090-2841173,2841270-2841343,2841803-2841827
Length = 216
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 257 GPFEQNGDGDSSSLQDDHKPRILLMGLRRSGKSSIQ-KVVFHKMSPNETLFLESTNQIVK 433
G + +S++ D + +++L+G GKS I + V + P + + ++
Sbjct: 13 GGLNNISNDNSATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQT 72
Query: 434 DDINNSSFVQFQIWDFPGQ 490
+ +S+ V+F+IWD GQ
Sbjct: 73 LALEDSTIVKFEIWDTAGQ 91
>08_01_0387 -
3426058-3426168,3426279-3426473,3426612-3426724,
3427121-3427157,3427270-3427341,3427849-3427962,
3428129-3428200,3428343-3428381,3429340-3429414,
3429561-3429674,3429749-3429813,3429927-3430047,
3430942-3431063,3431547-3431634
Length = 445
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 287 SSSLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQF 466
S + D H P + L+G GKSS+ +++ P + +T I+ I S+ +F
Sbjct: 236 SMPVVDPHIPTLCLVGSPNVGKSSLVRIL-SSGKPEVCSYPFTTRGILMGHI-VSNHERF 293
Query: 467 QIWDFPG 487
Q+ D PG
Sbjct: 294 QVTDTPG 300
>07_03_1116 -
24084162-24084201,24084481-24084570,24084640-24085220,
24085653-24085822,24086006-24087074
Length = 649
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 272 NGDGDSSSLQDDHKPRILL 328
NGDG+++SL+DD K R LL
Sbjct: 404 NGDGNAASLKDDPKTRELL 422
>07_03_0638 +
20196216-20196650,20196810-20196930,20197072-20197168,
20197284-20197323,20197648-20197731,20198966-20199130
Length = 313
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/76 (23%), Positives = 31/76 (40%)
Frame = +2
Query: 278 DGDSSSLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSF 457
D D++ ++D ++ L+G + GK+S L + N + K +
Sbjct: 117 DRDAADVEDVVSLKVSLLGDCQIGKTSFMVKYVGDDEEQNGLQMTGLNLMDKTLAVRGAR 176
Query: 458 VQFQIWDFPGQIDFFD 505
+ F IWD G F D
Sbjct: 177 IAFSIWDVAGDSQFLD 192
>05_07_0028 +
27153663-27153932,27154966-27155175,27156220-27156414,
27156491-27156840,27157198-27157423,27157524-27157692,
27158145-27158990,27159647-27159818,27159934-27160052,
27160117-27160155,27161033-27161157,27161250-27161309,
27161471-27161542,27161980-27162114
Length = 995
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 278 DGDSSSLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETL 403
DGD SSL+ LL GL R+ ++ ++VF + ETL
Sbjct: 537 DGDESSLRQFIGRFRLLWGLYRAHSNAEDEIVFPALESKETL 578
>04_04_1609 +
34760576-34760688,34760781-34760948,34761566-34761634,
34762125-34762247,34762296-34762501,34762723-34762729,
34762961-34763006,34763092-34763151,34763249-34763317,
34763790-34763873,34764178-34764263,34764859-34764949,
34765029-34765109,34765191-34765265,34765392-34765526
Length = 470
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 215 PNCYVGSFPKDFTYGPFEQNGDGDS--SSLQDDHKPRI 322
PN VGS K+ YG FE + S LQ + PR+
Sbjct: 350 PNLIVGSITKESLYGAFENGITAEQIISFLQQNAHPRV 387
>04_03_0037 -
9991176-9991268,9991403-9991474,9991569-9991928,
9992466-9992555,9992692-9992782,9993530-9993729,
9998024-9998101,9998196-9998312,10000017-10000112,
10000192-10000317,10000533-10000629,10000979-10001023,
10002106-10002179,10002267-10002350,10002439-10002522,
10002660-10002851,10003775-10003903,10004061-10004093,
10004190-10004286,10004833-10004883,10005211-10005289,
10005480-10005552,10005595-10005691,10006392-10006473,
10008345-10008691,10010271-10010535,10010624-10010743,
10010971-10011358
Length = 1219
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 557 VIDAQDDYQDALDKLQLTVTKAYRVNSNIK 646
++ A Y D +DKL L V A ++NS IK
Sbjct: 760 MVQALPQYSDQIDKLALHVEIAGKLNSTIK 789
>03_04_0127 -
17508808-17509029,17509195-17509938,17510004-17510242,
17510334-17510436,17510666-17510770,17510838-17510906,
17510998-17511402,17512048-17512156,17512240-17512295
Length = 683
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 215 PNCYVGSFPKDFTYGPFEQ 271
PNC +G +P D +Y P Q
Sbjct: 108 PNCVIGGYPLDVSYPPVVQ 126
>01_06_1680 -
39123536-39123628,39123726-39123821,39123941-39124093,
39124273-39124382,39124601-39124757,39124867-39124877,
39125138-39125228,39125401-39125496,39125605-39125724,
39125914-39125978,39126066-39126168,39126406-39126631,
39126714-39126790
Length = 465
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 266 EQNGDGDSSSLQDDHKPRILLMGLRRSGKSSIQKV 370
E NGDG SS +DD K R + S S+I K+
Sbjct: 304 ECNGDGYSSDWRDDDKSRFDFTNVGSSTDSTIYKL 338
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,467,406
Number of Sequences: 37544
Number of extensions: 292124
Number of successful extensions: 673
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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