Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_P22
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            25   2.7  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       23   8.3  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
 Frame = +2

Query: 317 RILLMGLRRSGKSSIQ----KVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFP 484
           +++L+G    GKSS+     K  FH+   +       T  +  DD      V+F+IWD  
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTT----VKFEIWDTA 81

Query: 485 GQIDFFDPTFDSDTIFGGCGALVFVIDAQD 574
           GQ  +      +   + G  A + V D Q+
Sbjct: 82  GQERYHSL---APMYYRGAQAAIVVYDIQN 108


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 317 RILLMGLRRSGKSSIQK 367
           R+LL+G   SGKS+I K
Sbjct: 46  RLLLLGAGESGKSTIVK 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,294
Number of Sequences: 2352
Number of extensions: 12768
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)