Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_P22
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73426-7|CAB60290.1| 338|Caenorhabditis elegans Hypothetical pr... 117 8e-27
AL110480-3|CAB60328.1| 338|Caenorhabditis elegans Hypothetical ... 117 8e-27
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 35 0.043
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 32 0.40
U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 30 1.2
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 30 1.2
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 30 1.2
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 30 1.2
Z93375-2|CAB07564.2| 359|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 28 6.6
L07144-7|AAK21444.2| 646|Caenorhabditis elegans Hypothetical pr... 28 6.6
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 28 6.6
>Z73426-7|CAB60290.1| 338|Caenorhabditis elegans Hypothetical
protein Y24F12A.2 protein.
Length = 338
Score = 117 bits (281), Expect = 8e-27
Identities = 57/114 (50%), Positives = 81/114 (71%)
Frame = +2
Query: 305 DHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFP 484
D +P ++LMG +RSGK+SI+KVVF KMSPNET+F+EST +I +D I SSF+ F+ +FP
Sbjct: 24 DSRPTVILMGHKRSGKTSIRKVVFQKMSPNETMFVESTARITRDTI-CSSFINFETIEFP 82
Query: 485 GQIDFFDPTFDSDTIFGGCGALVFVIDAQDDYQDALDKLQLTVTKAYRVNSNIK 646
GQ+ FD + D +F C AL+F+IDAQ + Q+ + L +AY++N NIK
Sbjct: 83 GQMCPFDDSLDPVGVFQKCEALLFIIDAQAELQEPIATLVEYFCRAYKINQNIK 136
>AL110480-3|CAB60328.1| 338|Caenorhabditis elegans Hypothetical
protein Y24F12A.2 protein.
Length = 338
Score = 117 bits (281), Expect = 8e-27
Identities = 57/114 (50%), Positives = 81/114 (71%)
Frame = +2
Query: 305 DHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFP 484
D +P ++LMG +RSGK+SI+KVVF KMSPNET+F+EST +I +D I SSF+ F+ +FP
Sbjct: 24 DSRPTVILMGHKRSGKTSIRKVVFQKMSPNETMFVESTARITRDTI-CSSFINFETIEFP 82
Query: 485 GQIDFFDPTFDSDTIFGGCGALVFVIDAQDDYQDALDKLQLTVTKAYRVNSNIK 646
GQ+ FD + D +F C AL+F+IDAQ + Q+ + L +AY++N NIK
Sbjct: 83 GQMCPFDDSLDPVGVFQKCEALLFIIDAQAELQEPIATLVEYFCRAYKINQNIK 136
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +2
Query: 311 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 490
K ++LLMG SGK+S++ ++F + L T ++ + + +WD GQ
Sbjct: 4 KRKVLLMGKSGSGKTSMRSIIFANYIARDCSRLGPTIEVEHAHVKFLGNMVLHLWDCGGQ 63
Query: 491 IDFFDPTFDS--DTIFGGCGALVFVIDAQ 571
F + S D IF L++V D +
Sbjct: 64 ESFMENFLVSQKDQIFKNVQVLIYVFDVE 92
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 35.1 bits (77), Expect = 0.043
Identities = 27/97 (27%), Positives = 52/97 (53%)
Frame = +2
Query: 317 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQID 496
RIL++GL +GK++I +K+ +++ T + + + ++F +WD GQ D
Sbjct: 15 RILMLGLDAAGKTTI----LYKLKLGQSVTTIPTVGFNVETVTYKN-IKFNVWDVGGQ-D 68
Query: 497 FFDPTFDSDTIFGGCGALVFVIDAQDDYQDALDKLQL 607
P + + G AL+FV+DA D +D +D+ ++
Sbjct: 69 KIRPLWRH--YYTGTQALIFVMDAAD--RDRVDEARM 101
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 31.9 bits (69), Expect = 0.40
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +2
Query: 317 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQID 496
RILL+GL +GK++I K ++S + + T + ++ +WD GQ
Sbjct: 19 RILLLGLDNAGKTTILK----QLSSEDVQHVTPTKGFNVKTVAAMGDIRLNVWDIGGQRS 74
Query: 497 FFDPTFDSDTIFGGCGALVFVIDAQD 574
P + + + L+FVID+ D
Sbjct: 75 -IRPYWSN--YYENIDTLIFVIDSND 97
>U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical
protein F57C12.2 protein.
Length = 556
Score = 31.5 bits (68), Expect = 0.53
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Frame = +2
Query: 317 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQID 496
+I+L+G +GKSS++ FH + L T I + + + ++ D+ G +
Sbjct: 264 KIILLGRTGAGKSSLRGAQFHDRRQFDN--LAPTGDITHSSLRYAG-IYLKMQDYGGTKE 320
Query: 497 FFDPTF-DSDTIFGGCGALVFVIDAQ-DDYQDALDKLQ 604
+ D T F A++F DA DD D Q
Sbjct: 321 EIENQLRDETTTFSNVDAMLFFFDASVDDMSADFDHYQ 358
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 30.7 bits (66), Expect = 0.93
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +2
Query: 305 DHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQ--IWD 478
+ + RIL++GL +GK+++ K + P +T +E T + DI F FQ +WD
Sbjct: 14 EREMRILILGLDNAGKTTLMKKFLDE--PTDT--IEPT---LGFDIKTVHFKDFQLNLWD 66
Query: 479 FPGQIDFFDPTFDSDTIFGGCGALVFVIDAQD 574
GQ F AL++V+D+ D
Sbjct: 67 VGGQKSLRSYW---KNYFESTDALIWVVDSSD 95
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/97 (22%), Positives = 48/97 (49%)
Frame = +2
Query: 317 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQID 496
RIL++GL +GK++I +++ E + T + + + ++FQ+WD GQ
Sbjct: 18 RILILGLDGAGKTTI----LYRLQVGEVVTTIPTIGFNVEQVEYKN-LKFQVWDLGGQTS 72
Query: 497 FFDPTFDSDTIFGGCGALVFVIDAQDDYQDALDKLQL 607
P + + A+++V+D+ D + + + +L
Sbjct: 73 -IRPYW--RCYYANTDAIIYVVDSADRDRVGISRQEL 106
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 317 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQID 496
RIL++GL +GK++I +K+ E + T + + + + F +WD GQ D
Sbjct: 19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 72
Query: 497 FFDPTFDSDTIFGGCGALVFVIDAQD 574
P + F L+FV+D+ D
Sbjct: 73 KIRPLWRH--YFQNTQGLIFVVDSND 96
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 317 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQID 496
RIL++GL +GK++I +K+ E + T + + + + F +WD GQ D
Sbjct: 19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 72
Query: 497 FFDPTFDSDTIFGGCGALVFVIDAQD 574
P + F L+FV+D+ D
Sbjct: 73 KIRPLWRH--YFQNTQGLIFVVDSND 96
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 317 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQID 496
RIL++GL +GK++I +K+ E + T + + + + F +WD GQ D
Sbjct: 19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 72
Query: 497 FFDPTFDSDTIFGGCGALVFVIDAQD 574
P + F L+FV+D+ D
Sbjct: 73 KIRPLWRH--YFQNTQGLIFVVDSND 96
>Z93375-2|CAB07564.2| 359|Caenorhabditis elegans Hypothetical
protein C38C6.4 protein.
Length = 359
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 187 KVQTIIRTNGNYCIF*LLFQYILSFNQHFGSVN*LFINILRCMF-INFSLIHFEAIYVPT 11
K +II + NY +F Q L F F + ++I+I C F N IH AIY+P
Sbjct: 21 KTYSIIEGSYNYYLFVFYIQIALIFIVLFYYLLNVYIDIKTCQFSTNTQKIH-HAIYLPC 79
Query: 10 YL 5
L
Sbjct: 80 VL 81
>Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical
protein R186.3 protein.
Length = 240
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/110 (22%), Positives = 45/110 (40%)
Frame = +2
Query: 293 SLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQI 472
S +K R+L +GL GK++I + K + T T+ + + +I
Sbjct: 32 SFASSNKNRVLFVGLMDCGKTTIFTQLSQKEAEYPTTTKTYTSMVENKITLRIKDKEKEI 91
Query: 473 WDFPGQIDFFDPTFDSDTIFGGCGALVFVIDAQDDYQDALDKLQLTVTKA 622
D+PG ++ +VFV+D+ ++A D +L T A
Sbjct: 92 IDYPGNDRLRQKLIENHLHSRSLLRIVFVVDSAAFSKNARDVAELFYTVA 141
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 27.9 bits (59), Expect = 6.6
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +2
Query: 320 ILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQIDF 499
+ L+GL+ SGK++ V+ + + N I + V ++WD GQ
Sbjct: 23 LTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNM---RKITKGN-VTIKLWDIGGQ--- 75
Query: 500 FDPTFDS--DTIFGGCGALVFVIDAQDD 577
P F S + G A+VF++DA D+
Sbjct: 76 --PRFRSMWERYCRGVNAIVFMVDAADE 101
>L07144-7|AAK21444.2| 646|Caenorhabditis elegans Hypothetical
protein R05D3.9 protein.
Length = 646
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 344 SGKSSIQKVVFHKMSPNETLFLE 412
SGK S QK+ K PNE + LE
Sbjct: 212 SGKRSHQKISMEKFGPNELILLE 234
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 27.9 bits (59), Expect = 6.6
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +2
Query: 320 ILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQIDF 499
+ L+GL+ SGK++ V+ + + N I + V ++WD GQ
Sbjct: 23 LTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNM---RKITKGN-VTIKLWDIGGQ--- 75
Query: 500 FDPTFDS--DTIFGGCGALVFVIDAQDD 577
P F S + G A+VF++DA D+
Sbjct: 76 --PRFRSMWERYCRGVNAIVFMVDAADE 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,144,754
Number of Sequences: 27780
Number of extensions: 285260
Number of successful extensions: 700
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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