Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_P21
         (718 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0155 - 32031370-32031707,32033066-32033279                       31   0.69 
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317...    29   2.8  
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432...    29   2.8  
02_04_0531 + 23707978-23709021                                         29   4.9  
02_04_0553 - 23808328-23809530                                         28   8.5  
02_04_0533 + 23719353-23719910,23720012-23720418,23720690-23721023     28   8.5  
01_06_1656 + 38946922-38947542,38947640-38947739,38948045-389481...    28   8.5  

>03_06_0155 - 32031370-32031707,32033066-32033279
          Length = 183

 Score = 31.5 bits (68), Expect = 0.69
 Identities = 17/64 (26%), Positives = 32/64 (50%)
 Frame = +1

Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXE 639
           IEE +QR EEA + +Q     + +A K    +  +    + G+   +  R K+ E L  +
Sbjct: 98  IEELKQREEEATQAQQQADVKLLEAKKLASQYQKEADKCSSGMDTCEEAREKSSEALVEQ 157

Query: 640 KKIS 651
           +K++
Sbjct: 158 RKLT 161


>12_02_0847 +
           23630937-23631099,23631200-23631396,23631604-23631738,
           23631904-23632077,23632195-23632407,23632507-23632751,
           23632890-23632930,23633200-23633238,23633552-23633565
          Length = 406

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +1

Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLE 633
           +I E+R+R +  ++   A+L+AMK+      N  ++   E     N +LE    K+QL+
Sbjct: 41  EIAEERERFQLEQRGNDALLEAMKE-ELVAANNELEAAKEEISRKNNELE--SVKKQLQ 96


>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
            27043601-27043705,27043828-27044257,27044356-27044517,
            27044565-27045260,27045349-27046128,27046441-27046654,
            27047621-27047981,27047993-27048140,27048276-27048419,
            27048784-27048888,27049749-27049794,27050089-27050255,
            27050338-27050490,27050654-27050950,27051053-27051220,
            27051298-27051363,27051451-27051927,27052031-27052768,
            27052935-27053120
          Length = 1993

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/83 (21%), Positives = 37/83 (44%)
 Frame = +1

Query: 466  EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXEKK 645
            E+ ++ ++ +    AMLQ +KD      N  +Q+K     ++  ++E  +TK Q +    
Sbjct: 1431 EEAKKFQKIKMDLLAMLQRVKDVENLNRNEKMQRKDMEEKIARQRMEIEETKRQRDELYH 1490

Query: 646  ISLSIRIKPLTIEGLSVDNSDXR 714
                ++ + L +E L       R
Sbjct: 1491 ELKDVKEQKLCLERLDSSKETKR 1513


>02_04_0531 + 23707978-23709021
          Length = 347

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 10 PGSPRTPHSNVAVLPVQEPVP 72
          P SPRTPH+ V  LPV   +P
Sbjct: 37 PDSPRTPHTYVGFLPVFGDLP 57


>02_04_0553 - 23808328-23809530
          Length = 400

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 10  PGSPRTPHSNVAVLPVQEPVP 72
           P SPRTPH+  ++LPV   +P
Sbjct: 73  PDSPRTPHTYGSLLPVYGDLP 93


>02_04_0533 + 23719353-23719910,23720012-23720418,23720690-23721023
          Length = 432

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 10  PGSPRTPHSNVAVLPVQEPVP 72
           P SPRTPH+  ++LPV   +P
Sbjct: 73  PDSPRTPHTYGSLLPVYGDLP 93


>01_06_1656 +
           38946922-38947542,38947640-38947739,38948045-38948189,
           38948868-38948991,38949443-38949960,38950111-38950458,
           38950557-38950638,38951309-38951707,38951790-38951927,
           38952063-38952108,38952200-38952369
          Length = 896

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
 Frame = +1

Query: 463 EEKRQRLEEAEKKRQAMLQ---AMKDASKTGPNFTIQKKSENFGLSNAQLE-RNKTKEQL 630
           E+KR+  EEAE K+Q   Q   A K+  +        +K +      A+ E + + KE +
Sbjct: 369 EQKRREKEEAEMKKQQRKQEEEAQKEQKRREKEEAETRKQQKKQQEEAEKEQKRREKEAV 428

Query: 631 EXEKKISL 654
           + +K++++
Sbjct: 429 QLKKQLAI 436


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.314    0.130    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,692,825
Number of Sequences: 37544
Number of extensions: 207985
Number of successful extensions: 623
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)