Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_P21
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 42 4e-04
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 42 4e-04
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 33 0.27
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 33 0.27
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical p... 30 1.9
AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical ... 30 1.9
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 29 2.5
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 29 3.3
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 29 4.4
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 29 4.4
AF025458-4|AAB70975.4| 374|Caenorhabditis elegans Hypothetical ... 29 4.4
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 28 7.7
U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 28 7.7
AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical ... 28 7.7
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 41.9 bits (94), Expect = 4e-04
Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 7/155 (4%)
Frame = +1
Query: 214 EGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSXXXXXXXX 393
EG+ + + + +D +L++Y R +R QA+RK++
Sbjct: 46 EGEKAMLAAKRRHENDEQAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEEREA 105
Query: 394 XXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS 573
EEK+++ EE KK Q M+ + G NF IQKK
Sbjct: 106 AERKRLDEERRQKEEQERRARAEEEKKRKEEEKLKKAQ-MMGGGFPGQQGGRNFVIQKKE 164
Query: 574 ENFGLSN-------AQLERNKTKEQLEXEKKISLS 657
E+ G+ + A+ E TKEQ E K ++++
Sbjct: 165 ESAGVGDRFGNIVQAKQEMGMTKEQQEEAKSVAMA 199
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 41.9 bits (94), Expect = 4e-04
Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 7/155 (4%)
Frame = +1
Query: 214 EGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSXXXXXXXX 393
EG+ + + + +D +L++Y R +R QA+RK++
Sbjct: 46 EGEKAMLAAKRRHENDEQAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEEREA 105
Query: 394 XXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS 573
EEK+++ EE KK Q M+ + G NF IQKK
Sbjct: 106 AERKRLDEERRQKEEQERRARAEEEKKRKEEEKLKKAQ-MMGGGFPGQQGGRNFVIQKKE 164
Query: 574 ENFGLSN-------AQLERNKTKEQLEXEKKISLS 657
E+ G+ + A+ E TKEQ E K ++++
Sbjct: 165 ESAGVGDRFGNIVQAKQEMGMTKEQQEEAKSVAMA 199
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 32.7 bits (71), Expect = 0.27
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQ-KKSENFGLSNAQLERNKTKEQLEX 636
IE+ Q+LEEAEK+ + + +AS + + T+ K+SE L E N E+L+
Sbjct: 648 IEDAVQKLEEAEKRAREL-----EASVSSRDTTVSTKESELSELKGKLTESNSFIEELKV 702
Query: 637 E-KKISLSIRIKPLTIEGLSVDNSD 708
+ +K+S I K +E L + D
Sbjct: 703 QVEKVSNEISEKQQEVENLMAEMRD 727
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 32.7 bits (71), Expect = 0.27
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQ-KKSENFGLSNAQLERNKTKEQLEX 636
IE+ Q+LEEAEK+ + + +AS + + T+ K+SE L E N E+L+
Sbjct: 650 IEDAVQKLEEAEKRAREL-----EASVSSRDTTVSTKESELSELKGKLTESNSFIEELKV 704
Query: 637 E-KKISLSIRIKPLTIEGLSVDNSD 708
+ +K+S I K +E L + D
Sbjct: 705 QVEKVSNEISEKQQEVENLMAEMRD 729
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 32.7 bits (71), Expect = 0.27
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQ-KKSENFGLSNAQLERNKTKEQLEX 636
IE+ Q+LEEAEK+ + + +AS + + T+ K+SE L E N E+L+
Sbjct: 650 IEDAVQKLEEAEKRAREL-----EASVSSRDTTVSTKESELSELKGKLTESNSFIEELKV 704
Query: 637 E-KKISLSIRIKPLTIEGLSVDNSD 708
+ +K+S I K +E L + D
Sbjct: 705 QVEKVSNEISEKQQEVENLMAEMRD 729
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXE 639
+E+K++ +EE EKKR + + A IQ K + Q R++ KE L+
Sbjct: 869 LEDKQKIVEELEKKRDEL--GEEAAKVKARQAEIQSKLDGIFKELVQCHRDEAKESLQKR 926
Query: 640 KKISLSI 660
+K+ I
Sbjct: 927 QKLEKDI 933
>Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical
protein C54D10.12 protein.
Length = 500
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +1
Query: 463 EEKRQRLEEAEKKRQAMLQAMKDAS------KTGPNFTIQKKSENFGLSNAQLERNKTKE 624
EEK Q++ E E+K Q +L K+ + + + I++K E N Q R K E
Sbjct: 208 EEKLQQIREKERKLQELLLRQKEEAEEEALRRLANDSEIEQKLEKIRYENEQQARQKDNE 267
Query: 625 QLEXEKKISL 654
Q K+ +
Sbjct: 268 QRLMRKQYKI 277
>AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical
protein Y6E2A.8 protein.
Length = 444
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Frame = +1
Query: 469 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS---ENFGLSNAQLERNKT--KEQLE 633
KR+ ++ AEK ++A L+ K++SK+ +KK ++ ++A+ K+ KEQ +
Sbjct: 323 KRETMKRAEKMKEAELKKKKESSKSKEEDKNKKKEVKIKSAPKTSAKKSAKKSAKKEQKK 382
Query: 634 XEKKI 648
EKK+
Sbjct: 383 SEKKV 387
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER-NKTKEQLE 633
D EEK+++ E +KK+ A + KDA +K ++ G + + K K+ E
Sbjct: 411 DAEEKKKKDAEEKKKKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKKKKDAGEKKKKDAE 470
Query: 634 XEKKIS 651
+KK++
Sbjct: 471 EKKKVA 476
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEX 636
D EEK+++ E EKK+ A + KDA +K + + + + K+ E
Sbjct: 419 DAEEKKKKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKKKKDAGEKKKKDAEEKKKVAEE 478
Query: 637 EKK 645
EKK
Sbjct: 479 EKK 481
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXEKK 645
E+R++LEE+E RQA L +++ E L +LE K + + +++
Sbjct: 337 ERRRKLEESETARQAELDRQATIYAEQERMAMERNRE---LERIRLEEKKRENERVRQEE 393
Query: 646 ISLSI 660
I++ I
Sbjct: 394 IAMEI 398
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER 609
D E+ ++ ++E EK + L S GP T +K+ +NF + + R
Sbjct: 514 DFEDMKEGVKEKEKVKDVDLNLAGWGSWVGPGMTEKKRRQNFVIKAKEKRR 564
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/54 (22%), Positives = 31/54 (57%)
Frame = +1
Query: 463 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKE 624
+EK+Q+L+E EK+R+ + Q ++ ++ +E+ +++ ++ K +E
Sbjct: 216 KEKKQKLKEMEKRREKLRQKERELLAVSDKVKKEEPAESSDEEDSRKDQRKPRE 269
>AF025458-4|AAB70975.4| 374|Caenorhabditis elegans Hypothetical
protein C01B12.2 protein.
Length = 374
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGP----NFTIQKKSENFGLSNAQLERNKTKEQLE 633
E ++R EEAE+K Q A+K +T N TIQ K+ L +E + L
Sbjct: 220 ENQKRQEEAERKLQEKQNAIKCLMETDSVTFWNQTIQSKTSTVVLDRISMELGSLAQNLI 279
Query: 634 XEKKISLSIR--IKPLTIEGLS 693
+ + S I+ L + GLS
Sbjct: 280 SGRDFAASSSKIIQVLQVLGLS 301
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 469 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXEKK 645
K+Q EEA K + L+ ++ + +KK E + + E K K+ LE EKK
Sbjct: 554 KKQEEEEARLKAEEELKIYEEEKRKKELEEERKKKEELEIKR-KAEEEKKKKALEEEKK 611
>U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical
protein M02B7.5 protein.
Length = 640
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 236 SVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNAL 340
S+K +G N+STNG N+ RR+S N+L
Sbjct: 594 SMKLSNGSNSSAGSSNSSTNGVNNSSFRRLSFNSL 628
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 463 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXEK 642
E+K ++ E+ ++K + KD K+G +K+ + + + K +E+ E EK
Sbjct: 121 EKKEEKKEDEKEKGDDKKEDEKDDKKSGSKDAEKKEEKKEEEKKEEKKEEKKEEKKEDEK 180
Query: 643 K 645
K
Sbjct: 181 K 181
>AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical
protein F57B10.6 protein.
Length = 829
Score = 27.9 bits (59), Expect = 7.7
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = +1
Query: 469 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENF------GLSNAQLERNKTKEQL 630
KRQ LE +KRQ +K++ K G + KKS+ GL + L N KE +
Sbjct: 81 KRQVLEARRQKRQNDDDILKNSKKMG-KLKVLKKSQKIREIASGGLDDVAL-ANAIKEVI 138
Query: 631 EXEKKISLS 657
KK+ L+
Sbjct: 139 SPSKKVILN 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.130 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,765,150
Number of Sequences: 27780
Number of extensions: 156049
Number of successful extensions: 594
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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