Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_P17
         (787 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        25   0.80 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        25   0.80 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        25   0.80 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.8  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   3.2  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   3.2  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   3.2  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +1

Query: 325 YSKSSGPNS--NSRLICEPCISRLRDASDFKKQVQECEKT 438
           +S S  P +  +S+L C+ C+  L   +D  +QV +C+ T
Sbjct: 530 FSGSCAPGAPLDSKL-CQQCVGNLASNNDRIRQVTKCKAT 568


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +1

Query: 325 YSKSSGPNS--NSRLICEPCISRLRDASDFKKQVQECEKT 438
           +S S  P +  +S+L C+ C+  L   +D  +QV +C+ T
Sbjct: 530 FSGSCAPGAPLDSKL-CQQCVGNLASNNDRIRQVTKCKAT 568


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +1

Query: 325 YSKSSGPNS--NSRLICEPCISRLRDASDFKKQVQECEKT 438
           +S S  P +  +S+L C+ C+  L   +D  +QV +C+ T
Sbjct: 530 FSGSCAPGAPLDSKL-CQQCVGNLASNNDRIRQVTKCKAT 568


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 735 GNSFSLSWGLPFDG 694
           G S  LSW  P+DG
Sbjct: 889 GRSVQLSWAAPYDG 902


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -3

Query: 431 SHSCTCFLKSEASRRRDMHGSQIRRLLLFGPLDFEYAMETLKVS 300
           ++S  C L  +  +R  +H S   R L+    DF   + +L++S
Sbjct: 291 TNSMIC-LNGQVLKRESIHNSSNARFLMDSMFDFAERVNSLRLS 333


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 324 CNGDTEGFC*HLSVDFPLSHPKIF 253
           C   TEG C H +VD   S PK++
Sbjct: 133 CGERTEGRCLHYTVD--KSKPKVY 154


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 324 CNGDTEGFC*HLSVDFPLSHPKIF 253
           C   TEG C H +VD   S PK++
Sbjct: 138 CGERTEGRCLHYTVD--KSKPKVY 159


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 324 CNGDTEGFC*HLSVDFPLSHPKIF 253
           C   TEG C H +VD   S PK++
Sbjct: 138 CGERTEGRCLHYTVD--KSKPKVY 159


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,857
Number of Sequences: 438
Number of extensions: 3804
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)