Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_P15
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U67066-1|AAB17271.1|  264|Drosophila melanogaster U2 snRNP auxil...    29   6.5  
AY058537-1|AAL13766.1|  264|Drosophila melanogaster LD24048p pro...    29   6.5  
AE014134-79|AAF51512.1|  264|Drosophila melanogaster CG3582-PA p...    29   6.5  
BT003623-1|AAO39626.1| 1104|Drosophila melanogaster GH02446p pro...    29   8.6  
AY113334-1|AAM29339.1|  370|Drosophila melanogaster AT31172p pro...    29   8.6  
AY047502-1|AAK77234.1|  515|Drosophila melanogaster GH01188p pro...    29   8.6  
AE014298-799|AAF46085.1|  370|Drosophila melanogaster CG15767-PA...    29   8.6  
AE014297-3863|AAF56518.1|  515|Drosophila melanogaster CG5886-PA...    29   8.6  
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE...    29   8.6  

>U67066-1|AAB17271.1|  264|Drosophila melanogaster U2 snRNP
           auxiliary factor protein.
          Length = 264

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 481 FCSFFHLKPSSFIIRRKLHS 540
           FC+F HLKP S  +RR L+S
Sbjct: 170 FCNFMHLKPISRELRRYLYS 189


>AY058537-1|AAL13766.1|  264|Drosophila melanogaster LD24048p
           protein.
          Length = 264

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 481 FCSFFHLKPSSFIIRRKLHS 540
           FC+F HLKP S  +RR L+S
Sbjct: 170 FCNFMHLKPISRELRRYLYS 189


>AE014134-79|AAF51512.1|  264|Drosophila melanogaster CG3582-PA
           protein.
          Length = 264

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 481 FCSFFHLKPSSFIIRRKLHS 540
           FC+F HLKP S  +RR L+S
Sbjct: 170 FCNFMHLKPISRELRRYLYS 189


>BT003623-1|AAO39626.1| 1104|Drosophila melanogaster GH02446p protein.
          Length = 1104

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -1

Query: 401  DKKEDRIDRVVNYADEPYVDSS 336
            +KK ++I+ VV  A EPYVDS+
Sbjct: 991  EKKHNKIESVVEVALEPYVDST 1012


>AY113334-1|AAM29339.1|  370|Drosophila melanogaster AT31172p
           protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = -3

Query: 609 QAAKLRTVERLRKI*RRYKF*WLGMKLTTNYERARL-QMEKRTENNRKLVNEKSNIRLLR 433
           Q+A  + ++RL ++ +R+   WLG++L   +ER R     KR  + +K ++E+S    LR
Sbjct: 107 QSALPQMLQRLDRV-QRHNL-WLGLRLMRIHERKREGDQRKREGDQQKRISEQSQSSNLR 164


>AY047502-1|AAK77234.1|  515|Drosophila melanogaster GH01188p
           protein.
          Length = 515

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 531 LTTNYERARLQMEKRTENNRKLVNEKSNIR 442
           LTTN  +  ++ +K+ E  R+  N K NIR
Sbjct: 391 LTTNESKTSIEEKKKAEEQRQANNAKKNIR 420


>AE014298-799|AAF46085.1|  370|Drosophila melanogaster CG15767-PA
           protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = -3

Query: 609 QAAKLRTVERLRKI*RRYKF*WLGMKLTTNYERARL-QMEKRTENNRKLVNEKSNIRLLR 433
           Q+A  + ++RL ++ +R+   WLG++L   +ER R     KR  + +K ++E+S    LR
Sbjct: 107 QSALPQMLQRLDRV-QRHNL-WLGLRLMRIHERKREGDQRKREGDQQKRISEQSQSSNLR 164


>AE014297-3863|AAF56518.1|  515|Drosophila melanogaster CG5886-PA
           protein.
          Length = 515

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 531 LTTNYERARLQMEKRTENNRKLVNEKSNIR 442
           LTTN  +  ++ +K+ E  R+  N K NIR
Sbjct: 391 LTTNESKTSIEEKKKAEEQRQANNAKKNIR 420


>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
            isoform E protein.
          Length = 9606

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -1

Query: 401  DKKEDRIDRVVNYADEPYVDSS 336
            +KK ++I+ VV  A EPYVDS+
Sbjct: 5233 EKKHNKIESVVEVALEPYVDST 5254


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,105,485
Number of Sequences: 53049
Number of extensions: 421961
Number of successful extensions: 966
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)