Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_P15
         (728 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L14429-1|AAA28219.2|  575|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF003130-8|AAB54130.2|  611|Caenorhabditis elegans Pip kinase pr...    28   7.9  

>L14429-1|AAA28219.2|  575|Caenorhabditis elegans Hypothetical
           protein ZK652.6a protein.
          Length = 575

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 583 FYGTEFRCLLCSYYDYIFXLQIERNY 660
           F G  ++CL CS YD  F     +NY
Sbjct: 22  FAGNRYKCLRCSDYDLCFSCFTTKNY 47


>AF003130-8|AAB54130.2|  611|Caenorhabditis elegans Pip kinase
           protein 1 protein.
          Length = 611

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 481 FCSFFHLKPSSFIIRRKLHSEPLKFISSLNFS 576
           F + FH+KP+ F+  R + +EPLK +S+   S
Sbjct: 153 FRNLFHIKPADFL--RSICTEPLKELSNAGAS 182


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,427,970
Number of Sequences: 27780
Number of extensions: 240966
Number of successful extensions: 596
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)