Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_P11
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   2.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   6.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   6.0  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +3

Query: 240 LVCLSLHLYYVFCLEEESG 296
           ++ +SL +Y+++ + EESG
Sbjct: 15  IIFVSLEIYHIYTVVEESG 33


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 631 YSDLWLYAVLLY 596
           YSD+W + VLL+
Sbjct: 674 YSDVWSFGVLLW 685


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = -1

Query: 669 LH*LSEVLKRHTYTLICGSMLFFYTSFNSYN 577
           LH +  + + HT  L+C  +  F   +   N
Sbjct: 110 LHQICHICELHTIFLVCNVLTVFKIRYKDLN 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,207
Number of Sequences: 336
Number of extensions: 3681
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)