Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_P09
         (727 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein ...    25   3.2  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   7.3  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   9.6  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    23   9.6  

>AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein S18
           protein.
          Length = 46

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 644 DRIPRYRAHNGCRPRWGL 697
           +R+ R  AH G R  WGL
Sbjct: 6   ERLKRIHAHRGMRHYWGL 23


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 409  RRPRGGSYTRTRSEAGHQGHGAD 477
            R+ +GG  +R R E   +G G D
Sbjct: 946  RKSQGGGGSRKRKEKARRGSGGD 968


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 18/88 (20%), Positives = 35/88 (39%)
 Frame = +2

Query: 110 KXSFLTEYFDEYRQHPIKKTKICRPEERWAKLEGNWMDPRGGTQDREWTDEEIENFIKTT 289
           K + L  Y    R+H + + +I   EER    E N+       Q  + T   +E  +   
Sbjct: 715 KVAALERYAAASREHDLLEQRIRLFEERNNDREANFRLLEDAYQSAKKTLANVEKKLAEV 774

Query: 290 MKSLRGQSTYFNDYCAHLSPEFKTRPFK 373
                 +++     CA+ +P+    P++
Sbjct: 775 KAKSSDKNSTARALCANKTPDKPDFPYR 802


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +2

Query: 362 RPFKPRDKKLKPCALKGDHVVEATPELGPKLAIKDTELMKLAKEIYERNMDE 517
           +P  P D   +P    GD + E  PE  P+    D E ++  +E  E   DE
Sbjct: 42  KPEAPVDDAEQPLPPNGDELPEDAPEPVPEDGSPDEEHLEEEQE-EEAEADE 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,885
Number of Sequences: 2352
Number of extensions: 12248
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)