Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_P09
         (727 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48045-2|CAA88100.2|  967|Caenorhabditis elegans Hypothetical pr...    32   0.48 
AF435952-1|AAL30828.1|  967|Caenorhabditis elegans Ser/Thr prote...    32   0.48 
Z81523-12|CAH60774.1|  364|Caenorhabditis elegans Hypothetical p...    31   0.84 
Z81086-10|CAH60775.1|  364|Caenorhabditis elegans Hypothetical p...    31   0.84 
Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF003139-5|AAM15577.2|  177|Caenorhabditis elegans Hypothetical ...    29   3.4  
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z95559-14|CAJ76976.1|  338|Caenorhabditis elegans Hypothetical p...    28   7.8  
Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical p...    28   7.8  
U13875-1|AAA21162.2|  541|Caenorhabditis elegans Yeast ula (ubiq...    28   7.8  
AF024500-4|AAB70365.1|  335|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z48045-2|CAA88100.2|  967|Caenorhabditis elegans Hypothetical
           protein C41C4.4 protein.
          Length = 967

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = +2

Query: 320 FNDYCAHLSPEFKTRPFK 373
           FNDY AHL PE  T PFK
Sbjct: 191 FNDYSAHLLPEVNTWPFK 208


>AF435952-1|AAL30828.1|  967|Caenorhabditis elegans Ser/Thr protein
           kinase protein.
          Length = 967

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = +2

Query: 320 FNDYCAHLSPEFKTRPFK 373
           FNDY AHL PE  T PFK
Sbjct: 191 FNDYSAHLLPEVNTWPFK 208


>Z81523-12|CAH60774.1|  364|Caenorhabditis elegans Hypothetical
           protein F32H2.11 protein.
          Length = 364

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -1

Query: 301 KALHCCLYEILDFLIRPFSILSAASRVHPIPFQFRPSLLRATYFRFLNRVLTIFI 137
           K  HCCL+ +L F I  F+ L     +  +P   R  + RAT +R LN  + I +
Sbjct: 7   KIRHCCLFFLLLFSICLFTRL-IFDDIQYVPISERFPISRATSYRHLNISVVIIV 60


>Z81086-10|CAH60775.1|  364|Caenorhabditis elegans Hypothetical
           protein F32H2.11 protein.
          Length = 364

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -1

Query: 301 KALHCCLYEILDFLIRPFSILSAASRVHPIPFQFRPSLLRATYFRFLNRVLTIFI 137
           K  HCCL+ +L F I  F+ L     +  +P   R  + RAT +R LN  + I +
Sbjct: 7   KIRHCCLFFLLLFSICLFTRL-IFDDIQYVPISERFPISRATSYRHLNISVVIIV 60


>Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical
           protein T14G8.3b protein.
          Length = 905

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = +2

Query: 257 DEEIENFIKTTMKSLRGQSTYFNDYCAHLSPEFKTRPFKPRDKKLKP 397
           D+EI NF+ T      G + Y     AHLS  FK  PF   +K L P
Sbjct: 378 DKEISNFLNTDEAIAMG-AVY---QAAHLSKSFKVLPFNVHEKILYP 420


>Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical
           protein T14G8.3a protein.
          Length = 921

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = +2

Query: 257 DEEIENFIKTTMKSLRGQSTYFNDYCAHLSPEFKTRPFKPRDKKLKP 397
           D+EI NF+ T      G + Y     AHLS  FK  PF   +K L P
Sbjct: 394 DKEISNFLNTDEAIAMG-AVY---QAAHLSKSFKVLPFNVHEKILYP 436


>AF003139-5|AAM15577.2|  177|Caenorhabditis elegans Hypothetical
           protein F53G12.8 protein.
          Length = 177

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +2

Query: 347 PEFKTRPFKPRDKKLKPCALKGDHVVEATPELGPKLAIKDTELMKLAKE 493
           P   T P K ++K++K     G       P+  PK  ++DT+L ++  E
Sbjct: 64  PSTSTDPLKTKEKEMKKEEAPGAPDAPTKPKSPPKPVVQDTKLAEVLPE 112


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/65 (29%), Positives = 25/65 (38%)
 Frame = +2

Query: 374 PRDKKLKPCALKGDHVVEATPELGPKLAIKDTELMKLAKEIYERNMDEPTLETLPTHLRI 553
           P +K      L+ D        + PKL +    L  LAKEI +R    P    +P   R 
Sbjct: 164 PMEKFFNKVILEADKKAVPKGSIDPKLKVDPKPLRLLAKEIADRETRNPLDPEIPILTRE 223

Query: 554 LGYVR 568
           L   R
Sbjct: 224 LATKR 228


>Z95559-14|CAJ76976.1|  338|Caenorhabditis elegans Hypothetical
           protein Y41E3.7c protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 440 LGPKLAIKDTELMKLAKEIYERNMDEPTLETLPTHL 547
           +  K AIKD EL + A ++ E++   P+L+ +   L
Sbjct: 19  IADKKAIKDAELKEFAPQVTEQSAQPPSLQQVDQRL 54


>Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical
           protein Y41E3.7a protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 440 LGPKLAIKDTELMKLAKEIYERNMDEPTLETLPTHL 547
           +  K AIKD EL + A ++ E++   P+L+ +   L
Sbjct: 116 IADKKAIKDAELKEFAPQVTEQSAQPPSLQQVDQRL 151


>U13875-1|AAA21162.2|  541|Caenorhabditis elegans Yeast ula
           (ubiquitin activating)homolog protein 1 protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 413 DHVVEATPELGPKLAIK-DTELMKLAKEIYERNMDEPTLETL 535
           +H +  + E  P+  ++ D    KL + I E N+DE TLE L
Sbjct: 165 EHTIANSHEENPRPDLRLDAPFSKLIEMINETNLDEMTLEQL 206


>AF024500-4|AAB70365.1|  335|Caenorhabditis elegans Hypothetical
           protein K06H6.6 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 371 KPRDKKLKPCALKGDHVVEATPELGPKLAIKDTELMKLAKEIYERNMDEPTLETLP 538
           K    ++ P A  G+H+ E    LG    +  T    +  EIY R M E + E +P
Sbjct: 45  KRLSSRMAPTARLGNHMFELAAVLGISRMLNRTATFFIEDEIY-RRMIESSKEAIP 99


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,475,338
Number of Sequences: 27780
Number of extensions: 274392
Number of successful extensions: 748
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)