Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_P08
(752 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82077-9|CAB04941.1| 259|Caenorhabditis elegans Hypothetical pr... 313 8e-86
AL032650-2|CAA21705.1| 259|Caenorhabditis elegans Hypothetical ... 313 8e-86
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 33 0.29
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 30 2.0
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 29 2.7
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68106-2|CAA92126.2| 402|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z35663-6|CAD82917.1| 606|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical pr... 29 3.5
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 3.5
AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode poly... 29 3.5
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 29 3.5
AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode poly... 29 3.5
AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode poly... 29 3.5
AF026209-11|AAB71282.1| 353|Caenorhabditis elegans Seven tm rec... 29 3.5
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 29 3.5
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 3.5
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 3.5
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 3.5
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 3.5
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 29 4.7
U80030-10|AAG24167.2| 378|Caenorhabditis elegans Serpentine rec... 29 4.7
U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical p... 29 4.7
Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical p... 28 8.2
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 28 8.2
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 28 8.2
>Z82077-9|CAB04941.1| 259|Caenorhabditis elegans Hypothetical
protein W09C5.1 protein.
Length = 259
Score = 313 bits (769), Expect = 8e-86
Identities = 148/229 (64%), Positives = 182/229 (79%)
Frame = +3
Query: 66 MPQNEYIERHQKLYGRRLDYXXXXXXXXXXXXXXXXXXXXXLRGIKAKIFNKERRNEKIQ 245
MPQNE+IE H+K +GRRLD+ LRG KAK+++K+R +EK++
Sbjct: 1 MPQNEHIELHRKRHGRRLDHEERQRKKLARAAHDRSQMAKTLRGHKAKLYHKKRYSEKVE 60
Query: 246 MKKKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPI 425
M+K +K HEEK+ K+ E+ +GA+P YLLDR Q+ VLSNMIKQKRK+KAGK++VPI
Sbjct: 61 MRKLLKQHEEKDQKNTVEQPDKGAVPAYLLDRQQQTSGTVLSNMIKQKRKQKAGKFNVPI 120
Query: 426 PKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKKA 605
P+VRA +DAE FKV+K+GK+ RK WKRMVTKVTFVGE+FTRKP KFERFIRPM LRFKKA
Sbjct: 121 PQVRAVSDAEAFKVVKTGKTNRKGWKRMVTKVTFVGESFTRKPAKFERFIRPMGLRFKKA 180
Query: 606 HVTHPELKATFCLPIIGVKKNPSSQMYTSLGVITKGTVIEVNISXLGLV 752
HVTHPEL+ TF LPI+GVKKNPSSQMYTSLGVITKGT++EVN+S LG+V
Sbjct: 181 HVTHPELQTTFHLPIVGVKKNPSSQMYTSLGVITKGTILEVNVSELGMV 229
>AL032650-2|CAA21705.1| 259|Caenorhabditis elegans Hypothetical
protein W09C5.1 protein.
Length = 259
Score = 313 bits (769), Expect = 8e-86
Identities = 148/229 (64%), Positives = 182/229 (79%)
Frame = +3
Query: 66 MPQNEYIERHQKLYGRRLDYXXXXXXXXXXXXXXXXXXXXXLRGIKAKIFNKERRNEKIQ 245
MPQNE+IE H+K +GRRLD+ LRG KAK+++K+R +EK++
Sbjct: 1 MPQNEHIELHRKRHGRRLDHEERQRKKLARAAHDRSQMAKTLRGHKAKLYHKKRYSEKVE 60
Query: 246 MKKKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPI 425
M+K +K HEEK+ K+ E+ +GA+P YLLDR Q+ VLSNMIKQKRK+KAGK++VPI
Sbjct: 61 MRKLLKQHEEKDQKNTVEQPDKGAVPAYLLDRQQQTSGTVLSNMIKQKRKQKAGKFNVPI 120
Query: 426 PKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKKA 605
P+VRA +DAE FKV+K+GK+ RK WKRMVTKVTFVGE+FTRKP KFERFIRPM LRFKKA
Sbjct: 121 PQVRAVSDAEAFKVVKTGKTNRKGWKRMVTKVTFVGESFTRKPAKFERFIRPMGLRFKKA 180
Query: 606 HVTHPELKATFCLPIIGVKKNPSSQMYTSLGVITKGTVIEVNISXLGLV 752
HVTHPEL+ TF LPI+GVKKNPSSQMYTSLGVITKGT++EVN+S LG+V
Sbjct: 181 HVTHPELQTTFHLPIVGVKKNPSSQMYTSLGVITKGTILEVNVSELGMV 229
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 201 KAKIFNKERRNEKIQMKKKIKAHEEKNVKHNTE-KVAEGALPVYLLDRDVQSRAKVLSNM 377
K K +ERR E+ + KK+K +EK N + + E +++ + A+ L N+
Sbjct: 989 KIKAAEEERRKERAEDAKKVKEGQEKIAILNAKVQEKEDKSEARRKQKEMDNEAEKLLNV 1048
Query: 378 IKQKRKEK-AGKW 413
K+K K K KW
Sbjct: 1049 EKEKEKRKIIEKW 1061
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Frame = +3
Query: 219 KERRNEKIQMKKKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKE 398
+E R E+I+ KK+ + ++K + + AE + V L ++ + R +VL ++ KRK
Sbjct: 429 EEERLEEIRRKKE-EERKKKEEEDEKRRKAEESERVRKL-KEEEKRKRVLEEEMEMKRKN 486
Query: 399 KAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGE-NFTRKPPKFERFI 575
+ K + AE+ + + ++ +K K K+ + F + P F R +
Sbjct: 487 EEAKIKLEAEMREKAEQAEIKRREEKSRALKKLQKEETNKMEQMNNCTFLQNVPLF-RHL 545
Query: 576 RP 581
P
Sbjct: 546 HP 547
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 29.9 bits (64), Expect = 2.0
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Frame = +3
Query: 219 KERRNEKIQMKKKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLSNM--IKQKR 392
+E NEK++++++I+ E KN E + E LLDR+ + KV + ++++
Sbjct: 831 EELENEKLKLEEEIQEMEIKN----EEALKENLKLSMLLDREKSEKVKVQKELEEVEKQG 886
Query: 393 KEKAGKWDVPIPKV--RAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRK 551
+EK + + K + + E+F VL + K + V K+ V + RK
Sbjct: 887 REKLLEKEREFRKTMEEMEQNEEIFNVL---ERKYNEQHKKVMKMNDVLREYERK 938
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +3
Query: 234 EKIQMKKKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSR--AKVLSNMIKQKRKEKAG 407
E+ + ++K A +EK ++ E+ E A Y L ++Q + A +K++ KE+
Sbjct: 942 ERREAEEKAAAEQEKILRRKMEEEREKAQKEYELQLEMQKQKLAAEAEEEVKRRNKEERD 1001
Query: 408 KWDVPIPKVRAQAD 449
+ D + A +D
Sbjct: 1002 RLDAAVSSRLASSD 1015
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 216 NKERRNEKIQMKKKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKR- 392
N E+ + + ++ K + H EK N E + EG PV++ + Q + + +R
Sbjct: 18 NDEKPAKSVLLEPKYRDHHEKISFRNKENMEEGEKPVFVSMANPQPTREDYERYDEDRRL 77
Query: 393 KEKAGKWDVPIPKVRAQADAE 455
K+KA D+ I + R A E
Sbjct: 78 KDKAR--DLRIARRRNSATPE 96
>Z68106-2|CAA92126.2| 402|Caenorhabditis elegans Hypothetical
protein F41E7.3 protein.
Length = 402
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 224 FLIEYFSFDTAEFARLFSAFMRLTSFTLPFSLLII*PSTVKLLMALN 84
FLI + AEF +F + + F LPF L+ I S +K+ + LN
Sbjct: 190 FLICSEDWSNAEFRSIFGIVVMILQFILPFVLIAI--SYIKIWLFLN 234
>Z35663-6|CAD82917.1| 606|Caenorhabditis elegans Hypothetical
protein T04A8.7b protein.
Length = 606
Score = 29.1 bits (62), Expect = 3.5
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 17/91 (18%)
Frame = +3
Query: 390 RKEKAGKWDVPIP-KVRAQADAEVFKVLKSGKSKRKA-------WKRMVT----KVTFV- 530
+KE+ GKW + +P K V+K S+ A W VT K T +
Sbjct: 20 KKEEHGKWSITVPAKEDGSCPIPHNSVIKIAVSRHGATHFKLSPWATFVTCPNPKETVIY 79
Query: 531 GENFTRKPPKFE----RFIRPMALRFKKAHV 611
+NF P K++ R RP +LR +AHV
Sbjct: 80 HQNFWNPPEKYQLKEARPARPASLRIYEAHV 110
>Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical
protein T04A8.7a protein.
Length = 681
Score = 29.1 bits (62), Expect = 3.5
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 17/91 (18%)
Frame = +3
Query: 390 RKEKAGKWDVPIP-KVRAQADAEVFKVLKSGKSKRKA-------WKRMVT----KVTFV- 530
+KE+ GKW + +P K V+K S+ A W VT K T +
Sbjct: 95 KKEEHGKWSITVPAKEDGSCPIPHNSVIKIAVSRHGATHFKLSPWATFVTCPNPKETVIY 154
Query: 531 GENFTRKPPKFE----RFIRPMALRFKKAHV 611
+NF P K++ R RP +LR +AHV
Sbjct: 155 HQNFWNPPEKYQLKEARPARPASLRIYEAHV 185
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 2 GRPMPFPXWYGDSVSCRISNQHAAER 79
G+P P W+ D V I NQH E+
Sbjct: 3605 GKPEPEVKWFKDGVPIAIDNQHVIEK 3630
>AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode
polyprotein allergen related,post-translationnally
cleaved, the diverse 14.5 kDa cleavageproducts bind
lipids and retinol (164.6 kD) protein.
Length = 1440
Score = 29.1 bits (62), Expect = 3.5
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Frame = +3
Query: 252 KKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVP--I 425
+KIK H K ++ + +GA V + ++++ A+ + + + KE + DV I
Sbjct: 967 EKIKEHVASGDKEASKALVKGA--VDRQEGEIKTIAEKMFGICGEVYKESKSRRDVAAKI 1024
Query: 426 PK----VRAQADAEVFKVLKSGKSKRKAWKRMVTKV 521
K ++A+ E+ K+ K GKSK KR+ V
Sbjct: 1025 EKHLSWLQAEEKEEILKMSKEGKSKDDIKKRLFEMV 1060
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 216 NKERRNEKIQMKKKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKR- 392
N E+ + + ++ K + H EK N E + EG PV++ + Q + + +R
Sbjct: 18 NDEKPAKSVLLEPKYRDHHEKISFRNKENMEEGEKPVFVSMANPQPTREDYERYDEDRRL 77
Query: 393 KEKAGKWDVPIPKVRAQADAE 455
K+KA D+ I + R A E
Sbjct: 78 KDKAR--DLRIARRRNSATPE 96
>AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform c protein.
Length = 1198
Score = 29.1 bits (62), Expect = 3.5
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Frame = +3
Query: 252 KKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVP--I 425
+KIK H K ++ + +GA V + ++++ A+ + + + KE + DV I
Sbjct: 725 EKIKEHVASGDKEASKALVKGA--VDRQEGEIKTIAEKMFGICGEVYKESKSRRDVAAKI 782
Query: 426 PK----VRAQADAEVFKVLKSGKSKRKAWKRMVTKV 521
K ++A+ E+ K+ K GKSK KR+ V
Sbjct: 783 EKHLSWLQAEEKEEILKMSKEGKSKDDIKKRLFEMV 818
>AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform a protein.
Length = 1440
Score = 29.1 bits (62), Expect = 3.5
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Frame = +3
Query: 252 KKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVP--I 425
+KIK H K ++ + +GA V + ++++ A+ + + + KE + DV I
Sbjct: 967 EKIKEHVASGDKEASKALVKGA--VDRQEGEIKTIAEKMFGICGEVYKESKSRRDVAAKI 1024
Query: 426 PK----VRAQADAEVFKVLKSGKSKRKAWKRMVTKV 521
K ++A+ E+ K+ K GKSK KR+ V
Sbjct: 1025 EKHLSWLQAEEKEEILKMSKEGKSKDDIKKRLFEMV 1060
>AF026209-11|AAB71282.1| 353|Caenorhabditis elegans Seven tm
receptor protein 262 protein.
Length = 353
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = -1
Query: 323 RQGTFGDLLCVMFDILLFVRFDFLFHLNLFIAAFLIEYFSFDTAEFARLFSAFMRLTSFT 144
++ F + + D LLFV F F +++ F+ +FS + + ++F +++ + FT
Sbjct: 77 KESIFPATMSCLMD-LLFVGF-FGTSMSILALHFIYRFFSVTNSRYLKIFDSWLIIPIFT 134
Query: 143 LP 138
+P
Sbjct: 135 VP 136
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 2 GRPMPFPXWYGDSVSCRISNQHAAER 79
G+P P W+ D V I NQH E+
Sbjct: 2965 GKPEPEVKWFKDGVPIAIDNQHVIEK 2990
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 2 GRPMPFPXWYGDSVSCRISNQHAAER 79
G+P P W+ D V I NQH E+
Sbjct: 3605 GKPEPEVKWFKDGVPIAIDNQHVIEK 3630
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 2 GRPMPFPXWYGDSVSCRISNQHAAER 79
G+P P W+ D V I NQH E+
Sbjct: 3605 GKPEPEVKWFKDGVPIAIDNQHVIEK 3630
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 2 GRPMPFPXWYGDSVSCRISNQHAAER 79
G+P P W+ D V I NQH E+
Sbjct: 2965 GKPEPEVKWFKDGVPIAIDNQHVIEK 2990
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 2 GRPMPFPXWYGDSVSCRISNQHAAER 79
G+P P W+ D V I NQH E+
Sbjct: 3605 GKPEPEVKWFKDGVPIAIDNQHVIEK 3630
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 28.7 bits (61), Expect = 4.7
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Frame = +3
Query: 201 KAKIFNKERRNEKIQMKKKIKAHEEK--NVKHNTEKVAEGALPVYLLDRDVQSRAKVLSN 374
K K +KE+ EK + K+KIK E+K +++ TE+ +E A L + + + L
Sbjct: 389 KEKEKDKEKEREKRKSKEKIKEKEKKMGSLEKTTERTSE-APSTNALPKAKPKKIRTLPP 447
Query: 375 MIKQKRKEKAGKWDV-------PIPKVRAQADAEVFK--VLKSGKSKRKA 497
KQK + + V PI K + A+V K V G SK+KA
Sbjct: 448 --KQKHTKTSSTSSVSHQTPPSPIKKPSPKLPAQVKKKTVSTGGGSKQKA 495
>U80030-10|AAG24167.2| 378|Caenorhabditis elegans Serpentine
receptor, class w protein136 protein.
Length = 378
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -2
Query: 628 FSSGCVTWAFLNLSAIGLMNRSNLGGLRVKFSPTNVTLVTMRFQAFLFDLP 476
FS C TW FL+++ I + N L+ K T F FL LP
Sbjct: 122 FSRRCSTWLFLSIAFIRTLIVRNPMNLKYKQLSNQPTAFYTIFGVFLLSLP 172
>U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical
protein F41G3.3 protein.
Length = 577
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 267 HEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLS--NMIKQKRKEKAGKWD 416
+ KNV EK+ G P+ + D D+ A V + +Q++ +KA +W+
Sbjct: 305 NSSKNVAEVVEKMNNGDWPIQIEDEDIPPSAAVNNPKRGYQQQQADKARQWE 356
>Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 333 LDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQAD 449
++R++ RAK + + ++K G+WD P A +D
Sbjct: 169 VERELADRAKAGELHVTGQPEKKKGRWDAEAPSTDASSD 207
>Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 333 LDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQAD 449
++R++ RAK + + ++K G+WD P A +D
Sbjct: 169 VERELADRAKAGELHVTGQPEKKKGRWDAEAPSTDASSD 207
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 656 SYYR*TESSF*FRMCDMGFLEPQCHRS 576
SY S + MC+MG + P CH+S
Sbjct: 1370 SYQDVDRSQMNYLMCNMGTVSPSCHKS 1396
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 656 SYYR*TESSF*FRMCDMGFLEPQCHRS 576
SY S + MC+MG + P CH+S
Sbjct: 1370 SYQDVDRSQMNYLMCNMGTVSPSCHKS 1396
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,896,555
Number of Sequences: 27780
Number of extensions: 286223
Number of successful extensions: 1081
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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