Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_P06
(446 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26434| Best HMM Match : rve (HMM E-Value=1.5e-18) 30 0.76
SB_7587| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-13) 29 2.3
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_18524| Best HMM Match : Peptidase_A17 (HMM E-Value=8.3e-21) 28 3.1
SB_12637| Best HMM Match : rve (HMM E-Value=3.7e-22) 28 3.1
SB_49811| Best HMM Match : rve (HMM E-Value=4.4e-22) 28 3.1
SB_29908| Best HMM Match : Calx-beta (HMM E-Value=2.3e-08) 28 3.1
SB_27452| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_25532| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_46539| Best HMM Match : Keratin_B2 (HMM E-Value=1.2) 27 5.3
SB_59058| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_56509| Best HMM Match : Ebp2 (HMM E-Value=2.1) 27 5.3
SB_34877| Best HMM Match : Methyltransf_2 (HMM E-Value=0.00017) 27 5.3
SB_38395| Best HMM Match : TAFII28 (HMM E-Value=2.9) 27 9.3
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
>SB_26434| Best HMM Match : rve (HMM E-Value=1.5e-18)
Length = 504
Score = 30.3 bits (65), Expect = 0.76
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 10 WSTFVSEXFTKMAKRTKKVGITWQIWHTLR 99
W TFVS K+A+ T K ITW+ T R
Sbjct: 79 WKTFVSNRVRKIAEITNKTPITWKHCSTER 108
>SB_7587| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-13)
Length = 351
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 98 GASLRKMVKKXEVTQHAKYTCSFCGK 175
G +K ++ E++ H KY CS CGK
Sbjct: 210 GGVTKKQIQSNEIS-HKKYVCSTCGK 234
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 10 WSTFVSEXFTKMAKRTKKVGITWQ 81
W TFVS K+A+ T + ITW+
Sbjct: 763 WKTFVSNRVRKIAEITNETPITWK 786
>SB_18524| Best HMM Match : Peptidase_A17 (HMM E-Value=8.3e-21)
Length = 620
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 10 WSTFVSEXFTKMAKRTKKVGITWQ 81
W TFVS K+A+ T + ITW+
Sbjct: 279 WKTFVSNRVRKIAEITNETPITWK 302
>SB_12637| Best HMM Match : rve (HMM E-Value=3.7e-22)
Length = 1072
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 10 WSTFVSEXFTKMAKRTKKVGITWQ 81
W TFVS K+A+ T + ITW+
Sbjct: 612 WKTFVSNRVRKIAEITNETPITWK 635
>SB_49811| Best HMM Match : rve (HMM E-Value=4.4e-22)
Length = 664
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 10 WSTFVSEXFTKMAKRTKKVGITWQ 81
W TFVS K+A+ T + ITW+
Sbjct: 129 WKTFVSNRVRKIAEITNETPITWK 152
>SB_29908| Best HMM Match : Calx-beta (HMM E-Value=2.3e-08)
Length = 549
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 10 WSTFVSEXFTKMAKRTKKVGITWQ 81
W TFVS K+A+ T + ITW+
Sbjct: 17 WKTFVSNRVRKIAEITNETPITWK 40
>SB_27452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 10 WSTFVSEXFTKMAKRTKKVGITWQ 81
W TFVS K+A+ T + ITW+
Sbjct: 17 WKTFVSNRVRKIAEITNETPITWK 40
>SB_25532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 301
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 10 WSTFVSEXFTKMAKRTKKVGITWQ 81
W TFVS K+A+ T + ITW+
Sbjct: 19 WKTFVSNRVRKIAEITNETPITWK 42
>SB_46539| Best HMM Match : Keratin_B2 (HMM E-Value=1.2)
Length = 300
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 160 LILW*GCYETFL-CRHLVL*AMQEDCSRRSLGILHYCCLIMQICCQEV 300
++L GCY L C H+V M C + +L C++M ICC +V
Sbjct: 127 VVLSLGCYVVMLLCHHVV---MSLSCY---IDMLLCRCVVMSICCYDV 168
>SB_59058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/76 (18%), Positives = 31/76 (40%)
Frame = -3
Query: 330 VYYLNYFTSRNLLTADLHDEAAVVENTQAPPATVLLHRLQDQMPTQERFIASLPQNEQVY 151
+ + + F N A + + V + +L+ +++ AS + E +
Sbjct: 122 ILHHSIFWGNNFWFAAVTPPSDVTNKPSSASRGLLVLLFSQAAALRKKIAASCWEKESEF 181
Query: 150 FACWVTSXFLTILRRE 103
+ CWV S F+T + +
Sbjct: 182 YECWVASFFITTAKTQ 197
>SB_56509| Best HMM Match : Ebp2 (HMM E-Value=2.1)
Length = 298
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 155 TCSFCGKDAMKRS 193
TC+FCGKDA K S
Sbjct: 243 TCNFCGKDARKTS 255
>SB_34877| Best HMM Match : Methyltransf_2 (HMM E-Value=0.00017)
Length = 893
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/56 (26%), Positives = 21/56 (37%)
Frame = -3
Query: 285 DLHDEAAVVENTQAPPATVLLHRLQDQMPTQERFIASLPQNEQVYFACWVTSXFLT 118
D H V EN + T RL D + + + + + VYF FLT
Sbjct: 670 DKHSAEHVAENVKPSCKTGSTRRLLDTLVAMQLLVKEMDSDPPVYFNSQTAEAFLT 725
>SB_38395| Best HMM Match : TAFII28 (HMM E-Value=2.9)
Length = 292
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 294 LTADLHDEAAVVENTQAP 241
+TADLHD A VV N + P
Sbjct: 247 ITADLHDTARVVVNLRTP 264
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 294 LTADLHDEAAVVENTQAP 241
+TADLHD A VV N + P
Sbjct: 972 ITADLHDTARVVVNLRTP 989
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,761,566
Number of Sequences: 59808
Number of extensions: 213717
Number of successful extensions: 547
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 883875528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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