Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_P05
(673 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5) 31 0.84
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 30 1.5
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 30 2.0
SB_52412| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_39016| Best HMM Match : Extensin_2 (HMM E-Value=0.53) 29 2.6
SB_16982| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4) 29 3.4
SB_16838| Best HMM Match : TolA (HMM E-Value=2) 29 3.4
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 29 3.4
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 29 3.4
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 29 4.5
SB_2460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_54706| Best HMM Match : Linker_histone (HMM E-Value=0.014) 28 6.0
SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_47024| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_56025| Best HMM Match : Keratin_B2 (HMM E-Value=0.4) 28 7.9
SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 28 7.9
SB_51163| Best HMM Match : Adeno_PIX (HMM E-Value=0.96) 28 7.9
SB_45788| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_21618| Best HMM Match : Yip1 (HMM E-Value=1.1) 28 7.9
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 32.7 bits (71), Expect = 0.28
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = -2
Query: 456 KERHRPTKLRDRNPSERHEQQRLSGLQE---RSQRNEPRARPPQSGPEREC---VQERGP 295
+ ++ K R+R ER +QQ+L +E R Q+ E + R + ++ QER
Sbjct: 177 RSQNEERKRREREQKEREKQQKLDMEKEERRRRQQEEEKKRREEEEKRKKVEKEKQEREK 236
Query: 294 CARRR*IQSEHQQRSRQCA*YRQIP 220
A++ + + QQR+ Q R+IP
Sbjct: 237 AAKKNIKRQQQQQRTDQQQYPREIP 261
>SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5)
Length = 215
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 456 KERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRAR 343
+ER R +K RDR+ R +R S ER R + R+R
Sbjct: 33 RERRRRSKSRDRDSRSRTSSRRRSRSSERRHRKDDRSR 70
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 456 KERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRAR 343
+ER R +K RDR+ R +R S ER R + R+R
Sbjct: 1603 RERRRRSKSRDRDSRSRTSSRRRSRSSERRHRKDDRSR 1640
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 31.1 bits (67), Expect = 0.84
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = -2
Query: 450 RHRPTKLRDRNPS--ERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR* 277
R R TK + ++PS R + R S ER R R+R P+S R + RRR
Sbjct: 312 RERNTKRKSKSPSLERRRSRARRSRSIERRDRRRSRSRSPRSSLGRSRRRSSSRNRRRRR 371
Query: 276 IQSEHQQRSR-QCA*YRQIPREST 208
+S+ ++ QC +++ R +
Sbjct: 372 SRSKSPLNTKSQCEKEQRVSRSKS 395
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 426 DRNPSERHEQQRLSG-LQERSQRNEPRARPPQSGPERECVQERGPCA 289
D PS E G +Q + +R R+ PP++G + + + ERGP A
Sbjct: 1340 DSEPSHAKESASGRGSVQAKKRRTSSRSVPPRAGEDPKAMIERGPDA 1386
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -2
Query: 456 KERHRPTKLRDRNPSE--RHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARR 283
K R R + R R+P + R ++R ++RS+ R+R P+ G + R P RR
Sbjct: 191 KSRSRSPRKRSRSPRKMLRSPRKRSRTPRKRSRSPRKRSRSPRKGSHTPKKRSRSP--RR 248
Query: 282 R*IQSEHQQRSR 247
H++RSR
Sbjct: 249 N--SQRHKERSR 258
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -2
Query: 456 KERHRPTKLRDRNPS-ERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR 280
+E + K ++R ER +QR +E R R+ P R + + P +RRR
Sbjct: 997 EEEEKKEKEQEREKERERLREQREKEREETRMRARDRSGDRARSPPRGRARSKSPVSRRR 1056
Query: 279 *IQSEHQQRSR 247
S + RSR
Sbjct: 1057 ASPSRSRSRSR 1067
>SB_52412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -2
Query: 420 NPSERHEQQRLSGLQERSQRNEPRARPPQSGP 325
NPS++ +++ + E +R EP P++GP
Sbjct: 397 NPSQKKDEEEMEEEDEEEEREEPDEPEPETGP 428
>SB_39016| Best HMM Match : Extensin_2 (HMM E-Value=0.53)
Length = 287
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 112 ATTPASPTACQTPTPATSRASTRPASV 192
A PA+P+A P P S ST P+SV
Sbjct: 114 APAPAAPSAAAAPAPVRSVPSTSPSSV 140
>SB_16982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 414 SERHEQQRLSGLQERSQRNEPRARPPQSGPER 319
SER ++R SGLQERS+ R+R P+ R
Sbjct: 203 SERTRKRRHSGLQERSRDRIARSRSPRRSRAR 234
>SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4)
Length = 426
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = -2
Query: 453 ERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*I 274
ER RP+ L R+ SER R+S RS + + P R +R AR R
Sbjct: 47 ERKRPSSL-GRDSSERRPSARVSSDNSRSPPHRRDSSRRSHSPSRRSSDDRSTDARDRRD 105
Query: 273 QSEHQQRSRQ 244
+ R R+
Sbjct: 106 RRRSSSRERR 115
>SB_16838| Best HMM Match : TolA (HMM E-Value=2)
Length = 371
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = -2
Query: 456 KERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQ-SGPERECVQER 301
+++ R + + R P +R +QQ+ Q++SQ+ + + +P Q S ++E Q R
Sbjct: 82 QQQQRRQQQQKRQPQQRRQQQQQRQPQQKSQQQQQQQQPQQPSHGQQEPHQRR 134
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/59 (38%), Positives = 30/59 (50%)
Frame = -2
Query: 456 KERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR 280
+ER RP +RDR E +R +R+ R RAR + ERE V+ER P R R
Sbjct: 524 QERDRP--VRDRETYRDRELER-----DRADRERERARDTRRDRERERVRER-PRERER 574
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -2
Query: 462 SPKERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERG 298
SP+ R R R R+P ++ R G ++R R+ R R G +R+ +++G
Sbjct: 448 SPRRRSRSPGHRSRSPRRGRDRDRDRG-RDRRDRDRDRDRDRDRGRDRDRDKDKG 501
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/82 (26%), Positives = 34/82 (41%)
Frame = -2
Query: 453 ERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*I 274
ER R K R+R E++R + +R R R + ERE +ER R
Sbjct: 205 ERQRE-KERERERERERERERERERERERERERERERERERERERERERERERERERERE 263
Query: 273 QSEHQQRSRQCA*YRQIPREST 208
+ ++R R+ Y + ST
Sbjct: 264 RERERERERERKRYACVSETST 285
>SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = -2
Query: 453 ERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*I 274
ER RP+ L R+ SER R+S RS + + P R +R AR R
Sbjct: 47 ERKRPSSL-GRDSSERRPSVRVSSDNSRSPPHRRDSSRRSHSPSRRSSDDRSTDARDRRD 105
Query: 273 QSEHQQRSRQ 244
+ R R+
Sbjct: 106 RRRSSSRERR 115
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 28.7 bits (61), Expect = 4.5
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = -2
Query: 459 PKERHRPTKLRDRNPS----ERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPC 292
PKE R R R PS +RHE +R G E +R + R ER+ + R
Sbjct: 1595 PKEEPRQGTERRREPSLRHDDRHEDRRSEGRPEDYERRDEERR---REAERKGERPREEF 1651
Query: 291 ARRR*IQSEHQQRS-RQCA*YRQIPREST 208
R+ S+ QRS R+ Y + RE +
Sbjct: 1652 ERKSERSSQRSQRSLREGERYYEERREES 1680
>SB_2460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 555
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = -2
Query: 462 SPKERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARR 283
S K T++R + S ++ G +ERS +E A+P + E +E+ +
Sbjct: 464 SNKSSSNGTQMRSNSGSLSQNWRKQEGRKERSGSDETEAKPSEVAAEETVAEEKVNSEEK 523
Query: 282 R*IQSEHQ 259
++S Q
Sbjct: 524 SSVESAEQ 531
>SB_54706| Best HMM Match : Linker_histone (HMM E-Value=0.014)
Length = 323
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 432 LRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPER 319
L++RN S QR R RN+P+ RPP S P +
Sbjct: 80 LKERNGSSLKSLQR-----NRQLRNQPQRRPPNSQPRK 112
>SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1560
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 453 ERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPE 322
E H R R + QQR+ L+ R Q ++ + RP P+
Sbjct: 994 EEHVTELNRQREEKDTSHQQRVKELERRKQHHQSQLRPTLGHPQ 1037
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 453 ERHRPTKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPE 322
E H R R + QQR+ L+ R Q ++ + RP P+
Sbjct: 1130 EEHVTELNRQREEKDTSHQQRVKELERRKQHHQSQLRPTLGHPQ 1173
>SB_47024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 456 KERHRPTKL-RDRNPSERHEQQRLSGLQER-SQRNEPRARPPQSGPERECVQERG 298
K +H +L R+R ER E++ L LQ R + +E AR ERE +E G
Sbjct: 740 KRKHEEARLQREREARER-EERELRELQRREEEEHESLAREEGERAERESQREAG 793
>SB_56025| Best HMM Match : Keratin_B2 (HMM E-Value=0.4)
Length = 187
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 112 ATTPASPTACQTPTPATSRASTR-PASVTA**DSTLS 219
A T PT TPT AT ST P+ VT D LS
Sbjct: 115 APTTTKPTTATTPTSATKGLSTEGPSPVTKGVDGALS 151
>SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 583
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/64 (20%), Positives = 27/64 (42%)
Frame = -2
Query: 435 KLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERECVQERGPCARRR*IQSEHQQ 256
+L + P E + S + ++ RP + +E QE+ +R + H++
Sbjct: 425 RLEEERPEEERTHEERSHKERSQEKRSHEKRPHEERSHKERSQEKRSHEKRPHEERSHEE 484
Query: 255 RSRQ 244
RS +
Sbjct: 485 RSEE 488
>SB_51163| Best HMM Match : Adeno_PIX (HMM E-Value=0.96)
Length = 772
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -3
Query: 401 SNNG*VGYRSDHSGMSQGRDHRRVGQNGSVYKSGVLAHDGVESRVSISSVVDSALS 234
S N +G+ S QG DH G+NG + + G LA+ G+ S SI ++ L+
Sbjct: 456 SFNSALGHLSSSKINLQGNDHANYGENG-INELGQLANTGL-SDSSIQRLIGQLLA 509
>SB_45788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Frame = +2
Query: 272 WIQRRRAQGPRSCTHSRSGPLCGGRALGSF--RCD-RSCSPLSR-CCSWRSLGLRSRSFV 439
W +R QG S G GGR G F CD RS +R C G R
Sbjct: 82 WRERDHGQGGSRRNESSHGGYRGGRNQGGFGGSCDERSYRDGTRVSCDDGGFGSRGNKGA 141
Query: 440 GLWRS 454
G W+S
Sbjct: 142 GRWKS 146
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 120 TSFSYGVSDPHTGDVKSQHETRVGDSVVGQYSLLES 227
TS + +SD H+G + + + ++GDS + + S + S
Sbjct: 2740 TSIAEELSDRHSGSSEVEEDIKIGDSSISEASEIRS 2775
>SB_21618| Best HMM Match : Yip1 (HMM E-Value=1.1)
Length = 338
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +2
Query: 359 FRCDRSCSP-LSR-CCSWRSLGLRSR 430
F CDR+C+P SR CC + L RSR
Sbjct: 268 FACDRACAPTCSRACCRSQYLAARSR 293
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Frame = -2
Query: 459 PKERHRP-----TKLRDRNPSERHEQQRLSGLQERSQRNEPRARPPQSGPERE 316
P+ R RP + RD P R + R G +ER PR+ QS + E
Sbjct: 615 PRSRERPRSRERSDRRDERPQRRGSRGRSPGRREREGERRPRSAERQSRRQDE 667
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,600,586
Number of Sequences: 59808
Number of extensions: 264599
Number of successful extensions: 1439
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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