Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_P03
         (817 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   2.9  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.8  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.9  

>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 16/82 (19%), Positives = 34/82 (41%)
 Frame = +2

Query: 308 ISDAYENHKKTEENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGH 487
           +SD   ++K   E     +   ++ ++  +K  I +A       HS     DI+E++  H
Sbjct: 31  VSDNRRSNKPIMEKR---RRARINNSLNELKTLILDAMKKDPARHSKLEKADILEMTVKH 87

Query: 488 MQKFLNEAKGLDATARGKLLEK 553
           +Q    +   + A     ++ K
Sbjct: 88  LQNLQRQQAAMSAATDPSVVSK 109


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/30 (26%), Positives = 11/30 (36%)
 Frame = -2

Query: 672 NAPSLWTKLIK*WLTGSSALGVFVWPS*AN 583
           N    W K +K W    +    + WP   N
Sbjct: 104 NLAKRWPKFVKDWCVVDATFASYGWPKGLN 133


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/30 (26%), Positives = 11/30 (36%)
 Frame = -2

Query: 672 NAPSLWTKLIK*WLTGSSALGVFVWPS*AN 583
           N    W K +K W    +    + WP   N
Sbjct: 104 NLAKRWPKFVKDWCVVDATFASYGWPKGLN 133


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 213 GTPSFCKNLFRTSGLD 166
           G P+F + +F+ SGLD
Sbjct: 507 GHPNFFRIVFQNSGLD 522


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +2

Query: 356 LSKGQEVSGNIFYMKQNISNACGTIALVHSV 448
           L KG+++  N++Y+   + N    + L ++V
Sbjct: 89  LLKGRKIRKNLYYLLLFVINVLYVLTLCYAV 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,223
Number of Sequences: 336
Number of extensions: 4086
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)