Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_O19
(743 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 182 1e-45
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 182 1e-45
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 176 8e-44
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 40 0.012
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 40 0.012
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 40 0.012
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 40 0.012
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 40 0.012
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 38 0.050
X98559-2|CAA67169.1| 931|Homo sapiens dsRNA adenosine deaminase... 31 5.8
X98559-1|CAA67170.1| 1221|Homo sapiens dsRNA adenosine deaminase... 31 5.8
X79449-1|CAA55968.1| 1226|Homo sapiens IFI-4 protein. 31 5.8
X79448-1|CAA55967.1| 931|Homo sapiens IFI-4 protein. 31 5.8
U75503-3|AAB97117.1| 1181|Homo sapiens RNA adenosine deaminase p... 31 5.8
U75503-2|AAB97116.1| 1200|Homo sapiens RNA adenosine deaminase p... 31 5.8
U75503-1|AAB97118.1| 1226|Homo sapiens RNA adenosine deaminase p... 31 5.8
U18121-1|AAC13782.1| 1226|Homo sapiens p136 protein. 31 5.8
U10439-1|AAB06697.1| 1226|Homo sapiens double-stranded RNA adeno... 31 5.8
BX538232-1|CAD98075.1| 1257|Homo sapiens hypothetical protein pr... 31 5.8
BC038227-1|AAH38227.1| 1226|Homo sapiens adenosine deaminase, RN... 31 5.8
AL691488-2|CAI17376.1| 1226|Homo sapiens adenosine deaminase, RN... 31 5.8
AL691488-1|CAI17375.1| 931|Homo sapiens adenosine deaminase, RN... 31 5.8
AL606500-2|CAH71908.1| 1226|Homo sapiens adenosine deaminase, RN... 31 5.8
AL606500-1|CAH71907.1| 931|Homo sapiens adenosine deaminase, RN... 31 5.8
AL592078-4|CAI16185.1| 1226|Homo sapiens adenosine deaminase, RN... 31 5.8
AL592078-2|CAI16183.1| 931|Homo sapiens adenosine deaminase, RN... 31 5.8
AB209891-1|BAD93128.1| 1244|Homo sapiens adenosine deaminase, RN... 31 5.8
BX640741-1|CAE45853.1| 1278|Homo sapiens hypothetical protein pr... 30 7.6
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 182 bits (443), Expect = 1e-45
Identities = 83/112 (74%), Positives = 93/112 (83%)
Frame = +2
Query: 407 KRLTPGXKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVE 586
K++ ++VGWYHTGPKLH+NDIAINEL++RYCPNSVLVIID KPKDLGLPTEAY +VE
Sbjct: 83 KKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVE 142
Query: 587 EVHDDGTPTSRTFEHVPSEIXXXXXXXXXXXHLLRDIXDTTVGSLSQRITNQ 742
EVHDDGTPTS+TFEHV SEI HLLRDI DTTVG+LSQRITNQ
Sbjct: 143 EVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQ 194
Score = 135 bits (327), Expect = 1e-31
Identities = 65/89 (73%), Positives = 71/89 (79%)
Frame = +1
Query: 217 DHFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 396
DHFNR+ K+GNQKRVVGVLLG W+ K VLDVSNSFAVPFDEDDKD SVWFLDHDYLENMY
Sbjct: 21 DHFNRIGKVGNQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMY 79
Query: 397 GMFKKVNARXKSCWLVPHWT*TSSE*HSN 483
GMFKKVNAR + + W T + H N
Sbjct: 80 GMFKKVNARER----IVGWYHTGPKLHKN 104
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 182 bits (443), Expect = 1e-45
Identities = 83/112 (74%), Positives = 93/112 (83%)
Frame = +2
Query: 407 KRLTPGXKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVE 586
K++ ++VGWYHTGPKLH+NDIAINEL++RYCPNSVLVIID KPKDLGLPTEAY +VE
Sbjct: 83 KKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVE 142
Query: 587 EVHDDGTPTSRTFEHVPSEIXXXXXXXXXXXHLLRDIXDTTVGSLSQRITNQ 742
EVHDDGTPTS+TFEHV SEI HLLRDI DTTVG+LSQRITNQ
Sbjct: 143 EVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQ 194
Score = 135 bits (327), Expect = 1e-31
Identities = 65/89 (73%), Positives = 71/89 (79%)
Frame = +1
Query: 217 DHFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 396
DHFNR+ K+GNQKRVVGVLLG W+ K VLDVSNSFAVPFDEDDKD SVWFLDHDYLENMY
Sbjct: 21 DHFNRIGKVGNQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMY 79
Query: 397 GMFKKVNARXKSCWLVPHWT*TSSE*HSN 483
GMFKKVNAR + + W T + H N
Sbjct: 80 GMFKKVNARER----IVGWYHTGPKLHKN 104
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 176 bits (428), Expect = 8e-44
Identities = 81/112 (72%), Positives = 91/112 (81%)
Frame = +2
Query: 407 KRLTPGXKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVE 586
K++ ++VGWYHTGPKLH+NDIAINEL++RYCPNSVLVIID KPKDLGLPTEAY +VE
Sbjct: 83 KKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVE 142
Query: 587 EVHDDGTPTSRTFEHVPSEIXXXXXXXXXXXHLLRDIXDTTVGSLSQRITNQ 742
E DDGTPTS+TFEHV SEI HLLRDI DTTVG+LSQRITNQ
Sbjct: 143 EDQDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQ 194
Score = 134 bits (325), Expect = 2e-31
Identities = 65/89 (73%), Positives = 71/89 (79%)
Frame = +1
Query: 217 DHFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 396
DHFNR+ K+GNQKRVVGVLLG W+ K VLDVSNSFAVPFDEDDKD SVWFLDHDYLENMY
Sbjct: 21 DHFNRIVKVGNQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMY 79
Query: 397 GMFKKVNARXKSCWLVPHWT*TSSE*HSN 483
GMFKKVNAR + + W T + H N
Sbjct: 80 GMFKKVNARER----IVGWYHTGPKLHKN 104
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 39.5 bits (88), Expect = 0.012
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = +2
Query: 407 KRLTPGXKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 574
K+++P ++GWY TG + ++ + I+E R PN + + +D ++ + +AY
Sbjct: 161 KKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 216
Score = 37.9 bits (84), Expect = 0.038
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +1
Query: 256 RVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN 417
RV+G LLG V +V+N F+VP +E + + +V D ++ +NMY + KKV+
Sbjct: 115 RVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVS 164
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 39.5 bits (88), Expect = 0.012
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = +2
Query: 407 KRLTPGXKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 574
K+++P ++GWY TG + ++ + I+E R PN + + +D ++ + +AY
Sbjct: 161 KKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 216
Score = 37.9 bits (84), Expect = 0.038
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +1
Query: 256 RVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN 417
RV+G LLG V +V+N F+VP +E + + +V D ++ +NMY + KKV+
Sbjct: 115 RVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVS 164
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 39.5 bits (88), Expect = 0.012
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = +2
Query: 407 KRLTPGXKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 574
K+++P ++GWY TG + ++ + I+E R PN + + +D ++ + +AY
Sbjct: 161 KKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 216
Score = 37.9 bits (84), Expect = 0.038
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +1
Query: 256 RVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN 417
RV+G LLG V +V+N F+VP +E + + +V D ++ +NMY + KKV+
Sbjct: 115 RVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVS 164
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 39.5 bits (88), Expect = 0.012
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = +2
Query: 407 KRLTPGXKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 574
K+++P ++GWY TG + ++ + I+E R PN + + +D ++ + +AY
Sbjct: 161 KKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 216
Score = 37.9 bits (84), Expect = 0.038
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +1
Query: 256 RVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN 417
RV+G LLG V +V+N F+VP +E + + +V D ++ +NMY + KKV+
Sbjct: 115 RVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVS 164
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 39.5 bits (88), Expect = 0.012
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = +2
Query: 407 KRLTPGXKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 574
K+++P ++GWY TG + ++ + I+E R PN + + +D ++ + +AY
Sbjct: 154 KKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY 209
Score = 37.9 bits (84), Expect = 0.038
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +1
Query: 256 RVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN 417
RV+G LLG V +V+N F+VP +E + + +V D ++ +NMY + KKV+
Sbjct: 108 RVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVS 157
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 37.5 bits (83), Expect = 0.050
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +2
Query: 407 KRLTPGXKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 574
K+++P ++GWY G + ++ + I+E R PN + + +D ++ + +AY
Sbjct: 150 KKVSPNELILGWYAAGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGHMSIKAY 205
Score = 36.7 bits (81), Expect = 0.088
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +1
Query: 217 DHFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 396
D + R +K RV+G LLG V +V+N F+V ++E D+ +D ++ +NMY
Sbjct: 94 DSYERRNK--GAARVIGTLLGTVNKHSV-EVTNCFSVSYNESDEV----VVDMEFAKNMY 146
Query: 397 GMFKKVN 417
+ KKV+
Sbjct: 147 ELHKKVS 153
>X98559-2|CAA67169.1| 931|Homo sapiens dsRNA adenosine deaminase
protein.
Length = 931
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 775 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 820
>X98559-1|CAA67170.1| 1221|Homo sapiens dsRNA adenosine deaminase
protein.
Length = 1221
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1065 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1110
>X79449-1|CAA55968.1| 1226|Homo sapiens IFI-4 protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>X79448-1|CAA55967.1| 931|Homo sapiens IFI-4 protein.
Length = 931
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 775 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 820
>U75503-3|AAB97117.1| 1181|Homo sapiens RNA adenosine deaminase
protein.
Length = 1181
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1025 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1070
>U75503-2|AAB97116.1| 1200|Homo sapiens RNA adenosine deaminase
protein.
Length = 1200
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1044 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1089
>U75503-1|AAB97118.1| 1226|Homo sapiens RNA adenosine deaminase
protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>U18121-1|AAC13782.1| 1226|Homo sapiens p136 protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>U10439-1|AAB06697.1| 1226|Homo sapiens double-stranded RNA adenosine
deaminase protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>BX538232-1|CAD98075.1| 1257|Homo sapiens hypothetical protein
protein.
Length = 1257
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1101 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1146
>BC038227-1|AAH38227.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>AL691488-2|CAI17376.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>AL691488-1|CAI17375.1| 931|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 931
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 775 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 820
>AL606500-2|CAH71908.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>AL606500-1|CAH71907.1| 931|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 931
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 775 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 820
>AL592078-4|CAI16185.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1070 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1115
>AL592078-2|CAI16183.1| 931|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 931
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 775 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 820
>AB209891-1|BAD93128.1| 1244|Homo sapiens adenosine deaminase,
RNA-specific isoform ADAR-a variant protein.
Length = 1244
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1088 LFSQGHLTRAIC-CRVTRDG-SAFEDGLRHPFIVNHPKVGRVSIYDSK 1133
>BX640741-1|CAE45853.1| 1278|Homo sapiens hypothetical protein
protein.
Length = 1278
Score = 30.3 bits (65), Expect = 7.6
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 385 LSNHGQGTRQICLCRLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 242
L + G TR IC CR+ + G + LRHP++ N+P R+ + DS+
Sbjct: 1101 LFSQGHLTRAIC-CRVTRDG-SAFEGGLRHPFIVNHPKVGRVSIYDSK 1146
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,684,926
Number of Sequences: 237096
Number of extensions: 1940654
Number of successful extensions: 7411
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 7265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7408
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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