Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_O18
(778 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 85 1e-17
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 48 2e-06
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 46 6e-06
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 41 2e-04
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 32 0.080
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 30 0.32
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 30 0.43
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 29 0.56
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 27 3.0
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 26 5.2
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 25 9.2
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 25 9.2
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 85.0 bits (201), Expect = 1e-17
Identities = 40/117 (34%), Positives = 69/117 (58%)
Frame = +2
Query: 191 ILRMMGQPFNXKILEELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFXL 370
++R +GQ L+++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAF +
Sbjct: 37 VMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNE---EEVREAFKV 93
Query: 371 YDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEIDTDGSGTVDFDEFMEMMTGE 541
+DK+GNGYI L + I+E DTDG G ++++EF +++ +
Sbjct: 94 FDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVISSK 150
Score = 50.0 bits (114), Expect = 4e-07
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +2
Query: 347 ELREAFXLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEIDTDGSGTVDFDEFME 526
E REAF L+D++ +G I ++ L + I E+D DG+GT+DF EF+
Sbjct: 13 EFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLT 72
Query: 527 MM 532
MM
Sbjct: 73 MM 74
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 97 LPPEQIAVLRKAFDGFDHNRSGSI 168
L EQIA R+AF FD ++ G+I
Sbjct: 6 LTDEQIAEFREAFSLFDRDQDGNI 29
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 47.6 bits (108), Expect = 2e-06
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Frame = +2
Query: 194 LRMMGQPFNXKILEELIEEVDADKSGR--LEFPEFVTLAAKFIVEEDAEAMQKELREAFX 367
+R +G FN + E L D DK+G+ L+ +FV + + IVE D +E++ AF
Sbjct: 63 MRALG--FNAEKSEVLKILRDFDKTGKGYLQMEDFVRVMTEKIVERDP---LEEIKRAFE 117
Query: 368 LYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEIDTDGSGTVDFDEFMEMMTGE 541
L+D + G I +LR + I+E D D G ++ EF+ +M E
Sbjct: 118 LFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFIAIMMDE 175
Score = 32.7 bits (71), Expect = 0.060
Identities = 16/71 (22%), Positives = 31/71 (43%)
Frame = +2
Query: 323 EDAEAMQKELREAFXLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEIDTDGSGT 502
E E ++++ EAF L+D + + I LR +++ D G G
Sbjct: 30 EITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGY 89
Query: 503 VDFDEFMEMMT 535
+ ++F+ +MT
Sbjct: 90 LQMEDFVRVMT 100
Score = 27.1 bits (57), Expect = 3.0
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +2
Query: 191 ILRMMGQPFNXKILEELIEEVDADKSGRLEFPEFVTL 301
+ + + + + + LE +IEE D D+ G + EF+ +
Sbjct: 135 VAKELNENIDDQELEAMIEEFDLDQDGEINEQEFIAI 171
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 46.0 bits (104), Expect = 6e-06
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Frame = +2
Query: 227 ILEELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFXLYDKEGNGYIPTS 406
+ L VD D G ++F EF+ + F V + E ++L+ AF +YD + +GYI
Sbjct: 57 LASRLFSVVDEDGGGDVDFQEFINSLSVFSVHGNKE---EKLKFAFKIYDIDRDGYISNG 113
Query: 407 SL-----REIXXXXXXXXXXXXXXXXIQEIDTDGSGTVDFDEFMEMMTG 538
L + I E+D D G + F+EF ++++G
Sbjct: 114 ELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFEEFKDIVSG 162
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 41.1 bits (92), Expect = 2e-04
Identities = 27/119 (22%), Positives = 54/119 (45%)
Frame = +2
Query: 170 PDDFVADILRMMGQPFNXKILEELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKE 349
P V +LR +G L +L E+ ++ +F++ + + E ++E +E
Sbjct: 27 PTSHVGSVLRSLGINVTDAELAKLSNEL----GDAIDEKKFMSFVSNKLRETESE---EE 79
Query: 350 LREAFXLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEIDTDGSGTVDFDEFME 526
+AF ++DK+ +GYI T+ + +QE D SG+ D+ +F++
Sbjct: 80 YIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDYYDFVQ 138
Score = 29.9 bits (64), Expect = 0.43
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 347 ELREAFXLYDKEGNGYIPTSSLREI 421
E++EAF LYD + +G IPTS + +
Sbjct: 10 EMKEAFVLYDIDKDGLIPTSHVGSV 34
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 32.3 bits (70), Expect = 0.080
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +2
Query: 233 EELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFXLYDKEGNGYIPTSSL 412
E + DADK+G ++F EF+ + V E + +L AF LYD + NG I +
Sbjct: 66 EYVFNVFDADKNGYIDFKEFICALS---VTSRGE-LNDKLIWAFQLYDLDNNGLISYDEM 121
Query: 413 REI 421
I
Sbjct: 122 LRI 124
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 30.3 bits (65), Expect = 0.32
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = -1
Query: 508 VNSAASVSVDLLDEAIEFIVSQLLVQFPEDLAQARRGNVTVAFLVVQXERFPEFFLHGLS 329
VN A + + DL D AI ++Q+L F +DL + VT+ + +P ++ + +S
Sbjct: 1251 VNVALTSTGDLDDSAIVSKLNQILSDFRDDLLEHNVRRVTIVGGRINKSAYPSYYTYRVS 1310
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 29.9 bits (64), Expect = 0.43
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 224 KILEELIEEVDADKSGRLEFPEF 292
+ LEE ++ DAD SG+L F EF
Sbjct: 333 EFLEETFQKADADHSGKLSFEEF 355
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 29.5 bits (63), Expect = 0.56
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +2
Query: 353 REAFXLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEIDTDGSGTVDFDEFMEMM 532
++AF L+D+ G G IP +S+ ++ I EI++ VD ++F++++
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDL----LRACGQNPTLAEITEIESTLPAEVDMEQFLQVL 64
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 344 KELREAFXLYDKEGNGYI 397
+EL+EAF L DK+G+G I
Sbjct: 48 QELKEAFALLDKDGDGNI 65
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 338 MQKELREAFXLYDKEGNGYIPTSSLR 415
M +E EAF L+D GYI LR
Sbjct: 10 MDEEAEEAFDLFDVTHKGYIDFEDLR 35
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 230 LEELIEEVDADKSGRLEFPEFV 295
+ E I EV+ D SGR+E +FV
Sbjct: 56 VREAIREVNVDSSGRVEPEDFV 77
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 25.4 bits (53), Expect = 9.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 284 PEFVTLAAKFIVEEDAEAMQKELREAFXLYDKEG 385
PEF AA+ +VEED E + EA + D+EG
Sbjct: 38 PEFSDEAAEALVEEDIEDLD---GEALDVEDEEG 68
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,567,015
Number of Sequences: 5004
Number of extensions: 44158
Number of successful extensions: 142
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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