Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_O18
         (778 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.65 
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.65 
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    26   1.5  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    26   1.5  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            23   8.0  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            23   8.0  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            23   8.0  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            23   8.0  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   8.0  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 27.1 bits (57), Expect = 0.65
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = -1

Query: 307 SGQSYELGEFQTTRFVGVDFLNKLLEDFXVEWLPHHSQDISHEVIRGYYP 158
           S Q++ +  +  T F+G DFL + L      ++ +H + +S ++   +YP
Sbjct: 334 SPQTHRMAPWVKTFFIGKDFLPRFLFMKRPPYIENHRKLLSKDLHACFYP 383


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 27.1 bits (57), Expect = 0.65
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = -1

Query: 307 SGQSYELGEFQTTRFVGVDFLNKLLEDFXVEWLPHHSQDISHEVIRGYYP 158
           S Q++ +  +  T F+G DFL + L      ++ +H + +S ++   +YP
Sbjct: 334 SPQTHRMAPWVKTFFIGKDFLPRFLFMKRPPYIENHRKLLSKDLHACFYP 383


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -1

Query: 523 HELVEVNSAASVSVDLLDEAIEFIVSQLLVQFPEDLAQA 407
           H + E+ +AA+VSV+++ EAI     +L  Q   +  QA
Sbjct: 274 HTVEELAAAANVSVEVIKEAIRVRQQELRAQKQYEKQQA 312


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = -1

Query: 523 HELVEVNSAASVSVDLLDEAIEFIVSQLLVQFPEDLAQA 407
           H + E+ +AA+VSV+++ EAI   V Q  ++ PE + +A
Sbjct: 281 HTVEELAAAANVSVEVIKEAIR--VRQQELRGPEAVREA 317


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +2

Query: 275 LEFPEFVTLAAKFIVEEDAE-AMQKELREAFXLYDKEGNGYIPTSSL 412
           ++ P  +T+  +F + + +  A +K +++ F    K G G  PTSS+
Sbjct: 54  IQEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSI 100


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +2

Query: 275 LEFPEFVTLAAKFIVEEDAE-AMQKELREAFXLYDKEGNGYIPTSSL 412
           ++ P  +T+  +F + + +  A +K +++ F    K G G  PTSS+
Sbjct: 54  IQEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSI 100


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +2

Query: 275 LEFPEFVTLAAKFIVEEDAE-AMQKELREAFXLYDKEGNGYIPTSSL 412
           ++ P  +T+  +F + + +  A +K +++ F    K G G  PTSS+
Sbjct: 54  IQEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSI 100


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +2

Query: 275 LEFPEFVTLAAKFIVEEDAE-AMQKELREAFXLYDKEGNGYIPTSSL 412
           ++ P  +T+  +F + + +  A +K +++ F    K G G  PTSS+
Sbjct: 54  IQEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSI 100


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 61   PWFWDTEDWADELPPE 108
            PWFWD   +A   PP+
Sbjct: 1021 PWFWDKLRFAMPHPPK 1036


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,691
Number of Sequences: 2352
Number of extensions: 12876
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)