Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_O17
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 239 1e-63
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 185 4e-47
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 107 8e-24
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 76 3e-14
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 41 0.001
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 41 0.001
AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical... 31 0.80
AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical ... 29 3.2
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 29 4.3
Z99102-1|CAB11776.1| 523|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical p... 28 9.9
U23170-3|AAC46700.2| 125|Caenorhabditis elegans Hypothetical pr... 28 9.9
AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical... 28 9.9
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 239 bits (586), Expect = 1e-63
Identities = 117/230 (50%), Positives = 152/230 (66%)
Frame = +3
Query: 126 STKVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGN 305
S +S I A RTP+ + AA+ER + I+EV++G
Sbjct: 16 SAALSNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQ 75
Query: 306 VFSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGM 485
V AN GQAPARQA + AGL S TTVNKVC+SG+K+I+LAAQ +QTG QD + GGM
Sbjct: 76 VCQANAGQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGGGM 135
Query: 486 ESMSNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDE 665
ESMS VPFY++RGE YGG Q++DGIV DGLTD Y+K HMGNC E T+K++ ITR+DQDE
Sbjct: 136 ESMSQVPFYVQRGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRKDQDE 195
Query: 666 YAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEXYKRVNFEK 815
YA+NSYK+SA A+E E+VPV V K+G ++ +DE + +VNF+K
Sbjct: 196 YAINSYKKSAKAWENGNIGPEVVPVNVKSKKGVTIV-DKDEEFTKVNFDK 244
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 185 bits (450), Expect = 4e-47
Identities = 99/230 (43%), Positives = 137/230 (59%)
Frame = +3
Query: 135 VSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVFS 314
+S +V I S RTP+ AAIER+G+ E+I+EV G V
Sbjct: 1 MSDKKVFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEEVIGGCVLP 60
Query: 315 ANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESM 494
A LGQ RQ + AGLP +T TVNKVC+S MK+++ AA ++ G D IL G E+M
Sbjct: 61 AGLGQNVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENM 120
Query: 495 SNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 674
S VPFY+ RGE +GG+Q+ DGI DGL D+ K MG CAE T K ITR++QD YA+
Sbjct: 121 SQVPFYVPRGEIPFGGIQMTDGISKDGLEDIKEKGPMGLCAEKTVKDYGITREEQDAYAI 180
Query: 675 NSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEXYKRVNFEKLQN 824
SYK+++ A+ ++ F +E+VPV V R + V+ EDE YK++ K+ +
Sbjct: 181 ESYKKASNAWSSEKFSEEVVPVSVKTSR-SEVVITEDEEYKKLIESKVSS 229
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 120 bits (290), Expect = 1e-27
Identities = 76/188 (40%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Frame = +3
Query: 39 EIVVTVSNRNIVLLDFNVLLQIFTAMAAFSTKVSLNEVVIASAVRTPMXXXXXXXXXXXX 218
EI+ ++ LD + + + T AA S K + I A RTP+
Sbjct: 69 EIMSRYFKAKMLSLDGHAIGRGITTSAALSNK----DAFIVGAARTPIGSFRSSLSSVTA 124
Query: 219 XXXXXXXVNAAIERAGIPKEEIKE--VYIGNVFSANLGQAPARQAVIFAGLPKSTICTTV 392
+ AA+ER + I+E V++G V AN GQA ARQA + AGL S TTV
Sbjct: 125 PELASVAIKAALERGAVKPSSIQEANVFLGQVCHANAGQASARQAALGAGLDLSVAVTTV 184
Query: 393 NKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVDGIVFD 572
NK +SGMK+I+LAAQ +QTG QD+ + GGMESMS VPF+L R E S Q V+ V D
Sbjct: 185 NKGWSSGMKAIILAAQQIQTGHQDLAIGGGMESMSQVPFFLARVEQSSNKYQ-VEQTVQD 243
Query: 573 GLTDVYNK 596
G++D ++K
Sbjct: 244 GISDFFDK 251
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 107 bits (258), Expect = 8e-24
Identities = 62/194 (31%), Positives = 109/194 (56%), Gaps = 3/194 (1%)
Frame = +3
Query: 246 AAIERAGIPKEEIKEVYIGNVFSANL-GQAPARQAVIFAGLPKSTICTTVNKVCASGMKS 422
AA++ A + + + V GNV +++ G +R + +G+P++ TVN++C SG ++
Sbjct: 38 AALKHANVGADAVDHVIFGNVVASSRDGIYLSRHIGLKSGVPQNVGALTVNRLCGSGFQA 97
Query: 423 IMLAAQGLQTGAQDIILAGGMESMSNVPFYLK--RGETSYGGMQLVDGIVFDGLTDVYNK 596
++ AAQ ++ G +I+LAGG E+MS VPF ++ R T+ G + +++D L+D Y K
Sbjct: 98 VVNAAQAIKLGESNIVLAGGTENMSMVPFAVRDIRFGTALGKKYEFEDMLWDSLSDPYAK 157
Query: 597 FHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIF 776
MG AE + ++TRQ+ DE+A+ S A EA + +E+V + + ++G F
Sbjct: 158 LAMGQTAEKLGAQYKVTRQEADEFALRSQTLWKKAQEAGVYKNEIVGITIKGRKGEE-SF 216
Query: 777 AEDEXYKRVNFEKL 818
DE + E L
Sbjct: 217 EIDEHPRATTAESL 230
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 76.2 bits (179), Expect = 3e-14
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 19/258 (7%)
Frame = +3
Query: 108 TAMAAFST-KVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEI 284
TA AA + K ++ +V+ AVRTP + A +E+ +P E++
Sbjct: 11 TARAASAVAKKNMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQL 70
Query: 285 KEVYIGNVFSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQD 464
+ G V AR+A + AG+P TV C S ++ L TG +
Sbjct: 71 DHIICGTVIQECKTSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNAN 130
Query: 465 IILAGGMESMSNVPF-YLKRGETSYGGM--------------QLVDGIV---FDGLTDVY 590
I+AGG+E +S+VP Y + + GM Q+V ++ + +
Sbjct: 131 AIIAGGVELLSDVPIRYNRNARKAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFS 190
Query: 591 NKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPV 770
MG+ + A ++R++QDE+A+ S+ ++ A + F D +VPV + K+ P
Sbjct: 191 TGETMGHSGDRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFTD-VVPVFLDGKK--PK 247
Query: 771 IFAEDEXYKRVNFEKLQN 824
ED + EKL +
Sbjct: 248 TIKEDNGIRVSTLEKLSS 265
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = +3
Query: 240 VNAAIERAGIPKEEIKEVYIGNVFSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 419
V A++ + +I++ +G +F A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 420 SIMLAAQGLQTGAQDIILAGGMESMS 497
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = +3
Query: 240 VNAAIERAGIPKEEIKEVYIGNVFSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 419
V A++ + +I++ +G +F A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 420 SIMLAAQGLQTGAQDIILAGGMESMS 497
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical
protein F25G6.2 protein.
Length = 1143
Score = 31.5 bits (68), Expect = 0.80
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
Frame = +3
Query: 507 FYLKRGETSYGGMQLVDGIVF-----DGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYA 671
F+++R E +++V + + L+D + + +C + + + +D D++
Sbjct: 729 FFMERPELRSSCLEVVKELCYLPFIRSSLSD-QARMQIHDCLQESPPMYMRSSEDSDQWT 787
Query: 672 VNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEXYKRVNFEKLQNCLRYSKRKM 851
YK S A Y D L+ +P+ A V +KRV L+ R ++M
Sbjct: 788 DEMYKNSLAVYSTLMPSDPLLLIPL-----ASVYAQSTNVFKRVVLRSLEPVFRQLSQEM 842
Query: 852 ALLL 863
+ L
Sbjct: 843 VISL 846
>AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical
protein C43H8.1 protein.
Length = 155
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 552 VDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 674
+DG++F L + N FH C AK+++I R D+ ++ +
Sbjct: 72 LDGLLFQFLDEALNSFHAEPCF--VAKRVEILRFDKKKFEI 110
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +2
Query: 314 CKFG-PSTCK-TSCNICRFAKKYHMYNCKQ--SMCLWH----EIYNVGSTRSTNWSPRYN 469
C +G PS + T NI + H ++CK C ++ YN+ ST+ W+ RYN
Sbjct: 184 CIYGYPSVFRITRGNIVELLELSHFFDCKNVTMFCEYNLCNDTCYNIRSTQKMEWAIRYN 243
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 344 SCNICRFAKKYHMYNCKQSMCLWHEI 421
+C++ R A KY+ Y +QS LW I
Sbjct: 15 ACSLRRMANKYYPYTMRQSFPLWTSI 40
>Z99102-1|CAB11776.1| 523|Caenorhabditis elegans Hypothetical
protein B0331.2 protein.
Length = 523
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 427 IIDFMPEAHTLFTVVHMVLFGKPANITACLAGA 329
I F E T FTV+ V FG P + T C GA
Sbjct: 443 ISGFCIEVGTAFTVLICVKFGIPISSTHCTVGA 475
>Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1
Query: 652 CLVICNFFAVFS 617
C ++CNFFAVFS
Sbjct: 15 CAIVCNFFAVFS 26
>U23170-3|AAC46700.2| 125|Caenorhabditis elegans Hypothetical
protein F58F12.2 protein.
Length = 125
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/45 (22%), Positives = 21/45 (46%)
Frame = -3
Query: 806 INSFILFIFSKYYRSPSFLWNGYRYXXXXXXXXXXXSCTSLVTID 672
I S F+F +++ ++LWN +++ T L+ +D
Sbjct: 17 IYSIFKFLFKLFFKFVNYLWNSHKFHEQLVLHNLRKRLTQLIKVD 61
>AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1
Query: 652 CLVICNFFAVFS 617
C ++CNFFAVFS
Sbjct: 15 CAIVCNFFAVFS 26
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,840,828
Number of Sequences: 27780
Number of extensions: 397852
Number of successful extensions: 1175
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -