Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_O14
(804 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024819-2|AAF59588.1| 71|Caenorhabditis elegans Hypothetical ... 80 2e-15
AF036694-7|AAB88345.2| 116|Caenorhabditis elegans Hypothetical ... 60 2e-09
AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical ... 31 0.73
Z70204-1|CAA94111.1| 643|Caenorhabditis elegans Hypothetical pr... 31 0.97
U39472-6|AAK31392.1| 218|Caenorhabditis elegans Hypothetical pr... 31 0.97
Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL021180-2|CAA15981.2| 188|Caenorhabditis elegans Hypothetical ... 29 2.9
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 2.9
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 2.9
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 2.9
Z74038-2|CAE48502.1| 611|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z74038-1|CAA98497.2| 578|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 29 5.1
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 29 5.1
AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical ... 29 5.1
Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z82264-12|CAB05161.2| 300|Caenorhabditis elegans Hypothetical p... 28 6.8
AF036689-3|AAB88322.2| 557|Caenorhabditis elegans Hypothetical ... 28 6.8
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 6.8
Z48230-4|CAO78721.1| 484|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z48230-3|CAA88263.1| 515|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z48006-7|CAO78729.1| 484|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z48006-6|CAA88051.1| 515|Caenorhabditis elegans Hypothetical pr... 28 9.0
>AC024819-2|AAF59588.1| 71|Caenorhabditis elegans Hypothetical
protein Y55B1AL.2 protein.
Length = 71
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/71 (50%), Positives = 52/71 (73%)
Frame = +1
Query: 46 MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHLFISADIVETLQARVDDL 225
MVNV KGVLV DPA +Q L+HLD++ LG KFI+++LD+THLFI +IV L+ +V+ +
Sbjct: 1 MVNVKKGVLVTSDPAFRQLLIHLDDSRQLGSKFIVRELDDTHLFIEKEIVPMLENKVEQI 60
Query: 226 MDQLSIPVHDK 258
M+ ++ DK
Sbjct: 61 MENMNPEAVDK 71
>AF036694-7|AAB88345.2| 116|Caenorhabditis elegans Hypothetical
protein CD4.7 protein.
Length = 116
Score = 60.1 bits (139), Expect = 2e-09
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Frame = +1
Query: 415 PHADLVMSKKVPKFADSNEKPTRKKKSKSAEYYKMRFRKTF-AQLVEED-ASFRSKPPNY 588
P A K K + + R++K E+ K RF+K+F A ++E+ A S P+Y
Sbjct: 5 PSAKKAKKVKEDKSGIVHGEKARRRKLARPEFNKQRFKKSFNAHVIEQSKAILDSAEPDY 64
Query: 589 LS------AQAPPSKFPERHFCAVCGFPSNYTCIPCGARYCSV 699
+ APPS+ P R FCAVCG S Y C CGA + +
Sbjct: 65 RRVNAYQLSSAPPSEKPARKFCAVCGIISKYCCTRCGANFFQI 107
>AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical
protein Y48G1A.3 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.73
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +1
Query: 631 FCAVCGFP-SNYTCIPCGARYCSVKC 705
FC+VCG P + C C YCS +C
Sbjct: 320 FCSVCGHPGAKKRCTQCKLAYCSQEC 345
>Z70204-1|CAA94111.1| 643|Caenorhabditis elegans Hypothetical
protein C11G6.1 protein.
Length = 643
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 394 QDNFHEDPHADLVMSKKVPKFADSNEKPTRKKKSKSAEYYK 516
+D F E P + + + D +KP ++K+ KS+E YK
Sbjct: 552 EDQFPEGPSSSVAADTTLEFGEDQEKKPKKEKRDKSSEEYK 592
>U39472-6|AAK31392.1| 218|Caenorhabditis elegans Hypothetical
protein B0304.2 protein.
Length = 218
Score = 31.1 bits (67), Expect = 0.97
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +1
Query: 448 PKFADSNEKPTRKKKSKSAEYYKMRFRKTFAQLVEEDASFRSKPPNYLSAQAPPSKFPER 627
PKF ++ TRK+ + Y + R TF+ LV + P L Q S R
Sbjct: 135 PKFFTNHGSTTRKRTENGSIYSRHRLGATFSPLVAGAKRKMATPSQSLKRQEKQSPLESR 194
Query: 628 H 630
H
Sbjct: 195 H 195
>Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical
protein ZK822.1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/88 (30%), Positives = 39/88 (44%)
Frame = +2
Query: 299 ANLEESKMPREERFWMMWRENVEREKQLRP*NKITFMKTHMQI*LCQRRCRNSQTLMRNQ 478
A +EE KM R R RE +++ +L+ K MQ+ RRC S+ L R
Sbjct: 347 AEIEEMKM-RNNRLVEQLREKSQQQSKLQ----CQLHKAEMQVNALSRRCALSEALDRLT 401
Query: 479 LGRRSLKALNIIRCDFGKRLRSW*KRMQ 562
L R K+ +RLR + +MQ
Sbjct: 402 LDERMEKSATSWIKKIEERLRIFENQMQ 429
>AL021180-2|CAA15981.2| 188|Caenorhabditis elegans Hypothetical
protein F43C1.3 protein.
Length = 188
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 634 CAVCGFPSN--YTCIPCGARYCSVKCLGTHLDTRC 732
C +CG Y C C YC++KC + C
Sbjct: 9 CGICGVEKREPYKCPRCDLLYCTIKCYRNPKHSEC 43
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 397 DNFHEDPHADLVMSKKVPKFADSNEKPTRKKKS 495
DN ++DPH L+ P F D N+ +K+
Sbjct: 131 DNVYQDPHQHLMHIHSAPNFHDENQNAANFRKT 163
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 397 DNFHEDPHADLVMSKKVPKFADSNEKPTRKKKS 495
DN ++DPH L+ P F D N+ +K+
Sbjct: 117 DNVYQDPHQHLMHIHSAPNFHDENQNAANFRKT 149
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 397 DNFHEDPHADLVMSKKVPKFADSNEKPTRKKKS 495
DN ++DPH L+ P F D N+ +K+
Sbjct: 117 DNVYQDPHQHLMHIHSAPNFHDENQNAANFRKT 149
>Z74038-2|CAE48502.1| 611|Caenorhabditis elegans Hypothetical
protein F58B4.1b protein.
Length = 611
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 580 PNYLSAQAPPSKFPERHFCAVCGFPSNYTCIPCGAR 687
P SAQ FP CA+C PS Y I C R
Sbjct: 358 PAASSAQCKNGGFPSPRNCAICICPSGYGGILCDQR 393
>Z74038-1|CAA98497.2| 578|Caenorhabditis elegans Hypothetical
protein F58B4.1a protein.
Length = 578
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 580 PNYLSAQAPPSKFPERHFCAVCGFPSNYTCIPCGAR 687
P SAQ FP CA+C PS Y I C R
Sbjct: 358 PAASSAQCKNGGFPSPRNCAICICPSGYGGILCDQR 393
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 661 YTCIPCGARYCSVKCLGTH 717
Y CI CG R+ +V L TH
Sbjct: 239 YACIECGKRFTTVTALSTH 257
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 661 YTCIPCGARYCSVKCLGTH 717
Y CI CG R+ +V L TH
Sbjct: 357 YACIECGKRFTTVTALSTH 375
>AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical
protein C46E10.8 protein.
Length = 172
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 640 VCGFPSNYTCIPCGARYCSVKCLGTHL 720
V G+ S +TC CGA Y S L H+
Sbjct: 57 VAGYKSKHTCEICGAHYSSKIYLNRHM 83
>Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical
protein M04C3.2 protein.
Length = 606
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 439 KKVPKFADSNEKPTRKKKSKSAEYYKMRFRKTFAQ-LVEED 558
KKVP+ ++ E+ + ++ + +YK++ RKT +Q VEED
Sbjct: 83 KKVPEVSEVPEECSENSQNDALSFYKLK-RKTKSQDFVEED 122
>Z82264-12|CAB05161.2| 300|Caenorhabditis elegans Hypothetical
protein C49C3.8 protein.
Length = 300
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 176 NKCVSSRS*RINFLPSARVSSKCSKNCFIAGSHSTRTP 63
+K V R R+N L R +CSK FI+ S + P
Sbjct: 150 SKTVPYRKRRMNDLEDLRKIKECSKRAFISNSDQSEVP 187
>AF036689-3|AAB88322.2| 557|Caenorhabditis elegans Hypothetical
protein C50A2.2 protein.
Length = 557
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 436 SKKVPKFADSNEKPTRKKKSKSAEYYKMRFRKT 534
+KKVP+ + + KKKSK A +Y+ + KT
Sbjct: 161 NKKVPRRSQFTDPDAPKKKSKGARHYRDQNLKT 193
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 577 PPNYLSAQAPPSKFPERHFCAVCGFPSNYTCIPCGARY 690
PP + A APP P C P+NY+C CG+ +
Sbjct: 153 PPCFGPACAPPPPAPILFGSVTCCAPNNYSC--CGSLF 188
>Z48230-4|CAO78721.1| 484|Caenorhabditis elegans Hypothetical
protein F19C6.4b protein.
Length = 484
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = -2
Query: 491 FFFLVGFSLESANFGTFFDITKSACGSS*KLSCSRASTAFLARRFLATSSKTFLLSASLT 312
F F++ + S +F DI+KS C C++ + + F + + +L ++T
Sbjct: 5 FIFIIVLTTVSQSFHKSIDISKSPCNDFYDYVCAKDTRSISNLTFTKMNQELEILKPNVT 64
Query: 311 LPDSREVILM*QLV 270
+ ++ I + ++V
Sbjct: 65 IENNGTFIALDKIV 78
>Z48230-3|CAA88263.1| 515|Caenorhabditis elegans Hypothetical
protein F19C6.4a protein.
Length = 515
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = -2
Query: 491 FFFLVGFSLESANFGTFFDITKSACGSS*KLSCSRASTAFLARRFLATSSKTFLLSASLT 312
F F++ + S +F DI+KS C C++ + + F + + +L ++T
Sbjct: 5 FIFIIVLTTVSQSFHKSIDISKSPCNDFYDYVCAKDTRSISNLTFTKMNQELEILKPNVT 64
Query: 311 LPDSREVILM*QLV 270
+ ++ I + ++V
Sbjct: 65 IENNGTFIALDKIV 78
>Z48006-7|CAO78729.1| 484|Caenorhabditis elegans Hypothetical
protein F19C6.4b protein.
Length = 484
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = -2
Query: 491 FFFLVGFSLESANFGTFFDITKSACGSS*KLSCSRASTAFLARRFLATSSKTFLLSASLT 312
F F++ + S +F DI+KS C C++ + + F + + +L ++T
Sbjct: 5 FIFIIVLTTVSQSFHKSIDISKSPCNDFYDYVCAKDTRSISNLTFTKMNQELEILKPNVT 64
Query: 311 LPDSREVILM*QLV 270
+ ++ I + ++V
Sbjct: 65 IENNGTFIALDKIV 78
>Z48006-6|CAA88051.1| 515|Caenorhabditis elegans Hypothetical
protein F19C6.4a protein.
Length = 515
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = -2
Query: 491 FFFLVGFSLESANFGTFFDITKSACGSS*KLSCSRASTAFLARRFLATSSKTFLLSASLT 312
F F++ + S +F DI+KS C C++ + + F + + +L ++T
Sbjct: 5 FIFIIVLTTVSQSFHKSIDISKSPCNDFYDYVCAKDTRSISNLTFTKMNQELEILKPNVT 64
Query: 311 LPDSREVILM*QLV 270
+ ++ I + ++V
Sbjct: 65 IENNGTFIALDKIV 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,486,036
Number of Sequences: 27780
Number of extensions: 397344
Number of successful extensions: 1167
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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