Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_O10
         (455 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468...    42   3e-04
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86...    37   0.009
08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369...    35   0.036
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847...    34   0.062

>04_04_1623 -
           34846056-34846223,34846547-34846644,34846738-34846829,
           34847096-34847202,34847385-34847490,34848108-34848547
          Length = 336

 Score = 41.5 bits (93), Expect = 3e-04
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = +2

Query: 11  ANXPGLLDLKGKAKFDAWHKLAGTSXEDAQKAYIEIVEGL 130
           A  P  L LK +AK++AWHKL     E+A + YI +V+ L
Sbjct: 133 APQPSALKLKARAKWNAWHKLGAMPTEEAMQKYITVVDEL 172


>06_01_0108 -
           860080-860162,860276-860338,860857-860974,861481-861492
          Length = 91

 Score = 36.7 bits (81), Expect = 0.009
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 20  PGLLDLKGKAKFDAWHKLAGTSXEDAQKAYIEIVEGLI 133
           PG+ +LK + K+DAW  + G S E+A   YI  V+ L+
Sbjct: 46  PGIFNLKDRYKWDAWKAVEGKSKEEAMADYITKVKQLL 83


>08_01_0417 -
           3692247-3692329,3692442-3692504,3693233-3693350,
           3694084-3694095
          Length = 91

 Score = 34.7 bits (76), Expect = 0.036
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +2

Query: 20  PGLLDLKGKAKFDAWHKLAGTSXEDAQKAYIEIVEGLI 133
           PG+   + +AK+DAW  + G S E+A   YI  V+ L+
Sbjct: 46  PGIFAQRDRAKWDAWKAVEGKSKEEAMSDYITKVKQLL 83


>03_05_0107 -
           20883353-20883627,20883739-20883801,20884608-20884725,
           20885012-20885023
          Length = 155

 Score = 33.9 bits (74), Expect = 0.062
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +2

Query: 20  PGLLDLKGKAKFDAWHKLAGTSXEDAQKAYIEIVEGL 130
           PG+   + +AK+DAW  + G S E+A   YI  V+ L
Sbjct: 46  PGIFAQRDRAKWDAWKAVEGKSKEEAMSDYITKVKQL 82


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,821,156
Number of Sequences: 37544
Number of extensions: 150899
Number of successful extensions: 299
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)