Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_O10
         (455 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...    56   1e-08
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    45   2e-05
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    35   0.032
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    33   0.075
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    32   0.23 
Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical p...    27   6.5  
Z70718-4|CAA94672.1|  225|Caenorhabditis elegans Hypothetical pr...    27   6.5  
AF067216-9|AAC17520.2|  646|Caenorhabditis elegans Hypothetical ...    27   8.6  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 56.0 bits (129), Expect = 1e-08
 Identities = 24/42 (57%), Positives = 31/42 (73%)
 Frame = +2

Query: 20  PGLLDLKGKAKFDAWHKLAGTSXEDAQKAYIEIVEGLIASIG 145
           PG+ DLKGKAK+ AW +  G + +DAQKAY+ +VE LIA  G
Sbjct: 44  PGMFDLKGKAKWSAWDEKKGLAKDDAQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 45.2 bits (102), Expect = 2e-05
 Identities = 17/39 (43%), Positives = 29/39 (74%)
 Frame = +2

Query: 20  PGLLDLKGKAKFDAWHKLAGTSXEDAQKAYIEIVEGLIA 136
           PG++D  G+AK+DAW+ L G + ++A+  Y ++V GLI+
Sbjct: 68  PGMMDFVGRAKYDAWNTLKGQTQDEARANYAKLVGGLIS 106


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 34.7 bits (76), Expect = 0.032
 Identities = 16/48 (33%), Positives = 30/48 (62%)
 Frame = +2

Query: 20  PGLLDLKGKAKFDAWHKLAGTSXEDAQKAYIEIVEGLIASIGLKE*KT 163
           P   D++G  K++AW+KL   + ++A++AY++ +   I  +  KE KT
Sbjct: 47  PSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSIVQKIREV-QKEYKT 93


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 33.5 bits (73), Expect = 0.075
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = +2

Query: 20  PGLLDLKGKAKFDAWHKLAGTSXEDAQKAYIEIVEGLIASI 142
           PG+  +  + K+D+W +L G S ++A++ YI+ +  +   I
Sbjct: 50  PGIFSIIERKKWDSWKELEGVSQDEAKERYIKALNDMFDKI 90


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 31.9 bits (69), Expect = 0.23
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 35  LKGKAKFDAWHKLAGTSXEDAQKAYIEIVEGL 130
           + G  K+ AW+K  G + E+A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188


>Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical
           protein Y41E3.7a protein.
          Length = 435

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +2

Query: 2   ADPANXPGLLDLKGKAKFDAWHKLAGTSXEDAQKAYIEIVE 124
           +D  +  G LD+ G     AW +L   S ++A  +++ +V+
Sbjct: 66  SDEFDNAGWLDITGNDVNKAWRELGSLSRDEAMASFVFLVD 106


>Z70718-4|CAA94672.1|  225|Caenorhabditis elegans Hypothetical
           protein C04G2.5 protein.
          Length = 225

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 14/66 (21%), Positives = 26/66 (39%)
 Frame = +2

Query: 143 GLKE*KT*FSMMQEHDNFHYRVYYINTRDFSHHHRASDFFDAIFILHFCLKCFFFKNTNS 322
           GLK  K   + +      +   Y  + + +    +A + F   F+  FC +    KN   
Sbjct: 82  GLKIHKMVHNFIPSRKQGYLGYYNFDVKSYEESEKARNLFPTDFVDAFCCQHLLGKNEQE 141

Query: 323 Y*FHKI 340
           + FH +
Sbjct: 142 FVFHAV 147


>AF067216-9|AAC17520.2|  646|Caenorhabditis elegans Hypothetical
           protein C35E7.4 protein.
          Length = 646

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/54 (25%), Positives = 21/54 (38%)
 Frame = +2

Query: 185 HDNFHYRVYYINTRDFSHHHRASDFFDAIFILHFCLKCFFFKNTNSY*FHKIIM 346
           H N  +   Y N      H+  +  F  +   H+C KC  F   N     ++IM
Sbjct: 239 HTNHFFITAYNNVSKRIGHYVFNQKFGQLHKQHYCPKCTLFDKGNRVNAEQVIM 292


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,872,820
Number of Sequences: 27780
Number of extensions: 146895
Number of successful extensions: 294
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)