Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_O07
         (824 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    25   0.55 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    25   0.55 
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    25   0.55 
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    25   0.55 
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    25   0.55 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   2.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.0  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   9.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.0  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.4 bits (53), Expect = 0.55
 Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
 Frame = +1

Query: 265 IPGLSSIY-WILCNNQRSPHACACIRKVKKPVGTRR----KSLRCWFGIWLPHCLY 417
           +P L  +  W    N R  +    I   + PVG  R    K +  W G+W P   Y
Sbjct: 21  LPNLGKVEGWQTTMNGRRVYRFEGIPYAQPPVGENRFEAPKPVEPWHGVWKPDASY 76


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.4 bits (53), Expect = 0.55
 Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
 Frame = +1

Query: 265 IPGLSSIY-WILCNNQRSPHACACIRKVKKPVGTRR----KSLRCWFGIWLPHCLY 417
           +P L  +  W    N R  +    I   + PVG  R    K +  W G+W P   Y
Sbjct: 21  LPNLGKVEGWQTTMNGRRVYRFEGIPYAQPPVGENRFEAPKPVEPWHGVWKPDASY 76


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.4 bits (53), Expect = 0.55
 Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
 Frame = +1

Query: 265 IPGLSSIY-WILCNNQRSPHACACIRKVKKPVGTRR----KSLRCWFGIWLPHCLY 417
           +P L  +  W    N R  +    I   + PVG  R    K +  W G+W P   Y
Sbjct: 21  LPNLGKVEGWQTTMNGRRVYRFEGIPYAQPPVGENRFEAPKPVEPWHGVWKPDASY 76


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.4 bits (53), Expect = 0.55
 Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
 Frame = +1

Query: 265 IPGLSSIY-WILCNNQRSPHACACIRKVKKPVGTRR----KSLRCWFGIWLPHCLY 417
           +P L  +  W    N R  +    I   + PVG  R    K +  W G+W P   Y
Sbjct: 21  LPNLGKVEGWQTTMNGRRVYRFEGIPYAQPPVGENRFEAPKPVEPWHGVWKPDASY 76


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.4 bits (53), Expect = 0.55
 Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
 Frame = +1

Query: 265 IPGLSSIY-WILCNNQRSPHACACIRKVKKPVGTRR----KSLRCWFGIWLPHCLY 417
           +P L  +  W    N R  +    I   + PVG  R    K +  W G+W P   Y
Sbjct: 21  LPNLGKVEGWQTTMNGRRVYRFEGIPYAQPPVGENRFEAPKPVEPWHGVWKPDASY 76


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 257 SSPYQDSPQSIGFSATISAPHMHAH 331
           ++ Y+  P S+G S   S+ H H H
Sbjct: 33  AAAYRSFPLSLGMSPYASSQHHHHH 57


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = -1

Query: 557 HHQLQV*SSQMRVSLGCHFGCFWLPNSQVLIY 462
           HH L     Q+ V  G H G    P +  + Y
Sbjct: 128 HHFLHENKYQLEVDSGYHLGASSTPTNSCMEY 159


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = -1

Query: 557 HHQLQV*SSQMRVSLGCHFGCFWLPNSQVLIY 462
           HH L     Q+ V  G H G    P +  + Y
Sbjct: 128 HHFLHENKYQLEVDSGYHLGASSTPTNSCMEY 159


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = -1

Query: 557 HHQLQV*SSQMRVSLGCHFGCFWLPNSQVLIY 462
           HH L     Q+ V  G H G    P +  + Y
Sbjct: 128 HHFLHENKYQLEVDSGYHLGASSTPTNSCMEY 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,483
Number of Sequences: 336
Number of extensions: 4880
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)