Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_O04
         (338 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54327-12|CAD56557.1|  543|Caenorhabditis elegans Hypothetical p...    29   1.1  
Z54327-11|CAD56556.1|  589|Caenorhabditis elegans Hypothetical p...    29   1.1  
Z54307-8|CAD56577.1|  543|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z54307-7|CAD56576.1|  589|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z54307-5|CAD56575.1|  513|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z54307-4|CAD56574.1|  510|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z54307-3|CAD56573.1|  516|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z54307-2|CAD56572.1|  503|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z54307-1|CAA91092.2|  493|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z78198-2|CAB01567.1|  296|Caenorhabditis elegans Hypothetical pr...    27   4.5  
AL023856-1|CAA19566.1|  327|Caenorhabditis elegans Hypothetical ...    27   4.5  
AF022975-3|AAB70674.1|  548|Caenorhabditis elegans Hypothetical ...    26   6.0  

>Z54327-12|CAD56557.1|  543|Caenorhabditis elegans Hypothetical
           protein F14F11.1c protein.
          Length = 543

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +2

Query: 8   PIAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 166
           P  ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 306 PSFHKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 365


>Z54327-11|CAD56556.1|  589|Caenorhabditis elegans Hypothetical
           protein F14F11.1b protein.
          Length = 589

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +2

Query: 8   PIAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 166
           P  ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 352 PSFHKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 411


>Z54307-8|CAD56577.1|  543|Caenorhabditis elegans Hypothetical
           protein F14F11.1c protein.
          Length = 543

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +2

Query: 8   PIAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 166
           P  ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 306 PSFHKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 365


>Z54307-7|CAD56576.1|  589|Caenorhabditis elegans Hypothetical
           protein F14F11.1b protein.
          Length = 589

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +2

Query: 8   PIAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 166
           P  ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 352 PSFHKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 411


>Z54307-5|CAD56575.1|  513|Caenorhabditis elegans Hypothetical
           protein F14F11.1g protein.
          Length = 513

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +2

Query: 8   PIAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 166
           P  ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 276 PSFHKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 335


>Z54307-4|CAD56574.1|  510|Caenorhabditis elegans Hypothetical
           protein F14F11.1f protein.
          Length = 510

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +2

Query: 8   PIAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 166
           P  ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 273 PSFHKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 332


>Z54307-3|CAD56573.1|  516|Caenorhabditis elegans Hypothetical
           protein F14F11.1e protein.
          Length = 516

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +2

Query: 8   PIAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 166
           P  ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 279 PSFHKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 338


>Z54307-2|CAD56572.1|  503|Caenorhabditis elegans Hypothetical
           protein F14F11.1d protein.
          Length = 503

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +2

Query: 8   PIAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 166
           P  ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 266 PSFHKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 325


>Z54307-1|CAA91092.2|  493|Caenorhabditis elegans Hypothetical
           protein F14F11.1a protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +2

Query: 8   PIAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 166
           P  ++++ +  TI D I    FF  +  H I +  G+L    FL +IC +R   L  HFS
Sbjct: 256 PSFHKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 315


>Z78198-2|CAB01567.1|  296|Caenorhabditis elegans Hypothetical
           protein F55C5.2 protein.
          Length = 296

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 78  MKKVDP*ILSAIVKEASIYSYA 13
           +KK+DP I++ I  + S YSY+
Sbjct: 173 LKKIDPKIITGITVDRSYYSYS 194


>AL023856-1|CAA19566.1|  327|Caenorhabditis elegans Hypothetical
           protein Y94A7B.4 protein.
          Length = 327

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 8   PIAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICY 139
           P A   + +  T  +++  + F I T FHG+   I  ++L  CY
Sbjct: 254 PAATGILTSQQTSNEQLEHNLFVITTSFHGVLSTILMIYLQKCY 297


>AF022975-3|AAB70674.1|  548|Caenorhabditis elegans Hypothetical
           protein K09C6.8 protein.
          Length = 548

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 107 IIGTLFLLICYIRHLNNHFSKNHHFGFEAA 196
           +IG + +++C    LN +    +HF F AA
Sbjct: 79  VIGNMGMVVCRYLALNQYHQTIYHFHFRAA 108


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,963,266
Number of Sequences: 27780
Number of extensions: 72618
Number of successful extensions: 333
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 333
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)