Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_O03
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    26   0.28 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   3.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.0  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   6.0  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 281 YFLKHLCY*FNKNILKNIMILLFISFEI 364
           Y+L H+C   +  ++ NI+ L+   FEI
Sbjct: 266 YYLSHVCQNVSTEVIGNILRLMHRRFEI 293


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 287 LKHLCY*FNKNILKNIMILLFISFEILI 370
           LKH+     KN+  N ++ +F S  I+I
Sbjct: 72  LKHIFNILMKNVTLNDVVFIFCSAPIII 99


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 476 RGTNHESVFLFDIFFILSL 532
           R  ++ SVFLFDI  I++L
Sbjct: 68  RSYSNFSVFLFDIITIVTL 86


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +1

Query: 403 NAFVFECFFFSCQLPFCECLQIRFKRY 483
           N + + C   S    +C  L+I  +RY
Sbjct: 283 NVYRYSCRDCSYATKYCHSLKIHLRRY 309


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +1

Query: 403 NAFVFECFFFSCQLPFCECLQIRFKRY 483
           N + + C   S    +C  L+I  +RY
Sbjct: 41  NVYRYSCRDCSYATKYCHSLKIHLRRY 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,385
Number of Sequences: 336
Number of extensions: 1869
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)