Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_O02
         (883 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.8  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    23   2.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   4.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   7.3  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.7  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   9.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   9.7  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +2

Query: 200 GKLL-FLGLDNAGKTTLLHML 259
           G+LL  LG   AGKTTLL+ L
Sbjct: 104 GELLAILGSSGAGKTTLLNTL 124


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +2

Query: 200 GKLL-FLGLDNAGKTTLLHML 259
           G+LL  LG   AGKTTLL+ L
Sbjct: 104 GELLAILGSSGAGKTTLLNTL 124


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 276 ASLSSFNICKSVVFPALSSPRNKSLPDFFHRPRNPNT 166
           A+ SSF IC   V+P +     + L D F     P T
Sbjct: 2   AAASSFFICILGVYPEIQEKVYQELRDIFQDSDRPIT 38


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 15/49 (30%), Positives = 18/49 (36%)
 Frame = -3

Query: 521 RESAQGSY*ASRQ*ATSLVQPWTPADVAGHTRRPGTLSRPPRGSSRATH 375
           R S      +SR   TS     T A        PG  S+PP  +S   H
Sbjct: 88  RTSTSNPTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQPPTDNSHVHH 136


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +2

Query: 212  FLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFD 349
            F G   +GK  L++ ++ +     V   +    E SI S ++TT D
Sbjct: 864  FRGSCGSGKYPLINAMRQELEGYKVKLEYDGPYETSISSGQYTTKD 909


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = -3

Query: 611 LFPFQWSADTD*KSDVVRLHWQHRVYQSCCRESAQGSY*ASR 486
           +F  +W    D + D +R +W  +  +    + A G Y  +R
Sbjct: 198 IFQKKWRGYEDFRRDFLRTYWSAKRQRDIRFQIATGRYDETR 239


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 623 ELPGRPLELFMC 658
           ELPG  L LF C
Sbjct: 495 ELPGETLRLFTC 506


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 623 ELPGRPLELFMC 658
           ELPG  L LF C
Sbjct: 502 ELPGETLRLFTC 513


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 767 ICSYVDEA**RGCNA 723
           ICS+ DEA  +GC++
Sbjct: 150 ICSWPDEAKKKGCSS 164


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 360 CPPRSNVVKRILP 322
           CPP+   +KR+LP
Sbjct: 53  CPPQGVDLKRVLP 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,949
Number of Sequences: 336
Number of extensions: 4003
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)