Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_O01
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical ... 36 0.023
U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical pr... 32 0.38
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 32 0.38
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 32 0.38
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 32 0.38
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 32 0.50
AC006617-1|AAF39770.2| 397|Caenorhabditis elegans Hypothetical ... 32 0.50
U29378-4|AAA68727.2| 667|Caenorhabditis elegans Temporarily ass... 30 1.5
Z78417-10|CAB01688.2| 745|Caenorhabditis elegans Hypothetical p... 30 2.0
Z81583-2|CAB04670.1| 314|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81483-3|CAB03961.1| 152|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical ... 29 4.7
Z74032-8|CAA98462.3| 325|Caenorhabditis elegans Hypothetical pr... 28 8.1
>AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical
protein Y22D7AL.9 protein.
Length = 836
Score = 36.3 bits (80), Expect = 0.023
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 369 TKIHMLDNPKKKSKMWISIAE-ELKSLNVEVTADQVRWKINALTKKYKDCIDNGQGAVSF 545
T + N +KK +M I +A EL+ N E+ V IN +DC +N + A+S
Sbjct: 640 TIFKLASNNEKKVEMLILLARAELERNNTEIALSAVEKSINLA----EDCENNEKLAISC 695
Query: 546 KYFNEMHQILGRYND 590
+ E++Q +G +ND
Sbjct: 696 RLIAEIYQKIGGFND 710
>U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical
protein F48C1.1 protein.
Length = 1064
Score = 32.3 bits (70), Expect = 0.38
Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Frame = +3
Query: 243 PVPTYNHNQNISQQEESDVNEMNKQNIIWTKNSTIMLLNLYETKIHMLDNPKKKSKMWIS 422
P P N N++ + E VN++ K + ++ K I++++ + + M++ ++ +I
Sbjct: 353 PKPEKITNANVAAKAEKLVNQLEKMSEMY-KAPVILMMHGDDFRFDMIEEWNQQHDNFIP 411
Query: 423 IAEEL-KSLNVEVTADQVRWKINALTKKYKDCIDNGQGAVSFKYFNEM 563
+ +E+ K VE+ N L K Y + D+ VS +F M
Sbjct: 412 VFDEINKGSRVEIRFGTFTDYFNDLEKWYSNNKDSEPPTVSGDFFPYM 459
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 336 NSTIMLLNLYETKIHMLDNPKKKSKMWISIAEELKSLNVEVTADQVRWKINALTKKYKDC 515
N +ML NL K+ N +K + E+ +L ++V DQV WK LTK D
Sbjct: 740 NGNLMLFNLMLDKVANKRNLFEKWANHQNFLHEILALPMKVYGDQVLWKGETLTKPAYDV 799
Query: 516 I 518
+
Sbjct: 800 L 800
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 336 NSTIMLLNLYETKIHMLDNPKKKSKMWISIAEELKSLNVEVTADQVRWKINALTKKYKDC 515
N +ML NL K+ N +K + E+ +L ++V DQV WK LTK D
Sbjct: 740 NGNLMLFNLMLDKVANKRNLFEKWANHQNFLHEILALPMKVYGDQVLWKGETLTKPAYDV 799
Query: 516 I 518
+
Sbjct: 800 L 800
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 336 NSTIMLLNLYETKIHMLDNPKKKSKMWISIAEELKSLNVEVTADQVRWKINALTKKYKDC 515
N +ML NL K+ N +K + E+ +L ++V DQV WK LTK D
Sbjct: 740 NGNLMLFNLMLDKVANKRNLFEKWANHQNFLHEILALPMKVYGDQVLWKGETLTKPAYDV 799
Query: 516 I 518
+
Sbjct: 800 L 800
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 31.9 bits (69), Expect = 0.50
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 525 GQGAVSFKYFNEMHQILG---RYNDNGGNYRLASGVIQEDAEKSKDRKNLMKTTTPFRKL 695
GQ SF ++ +++ R+N+NG +YR + E E+++ K + K +++
Sbjct: 549 GQDLESFMNYSNDEEMINWCKRFNENGPDYRAKKALAWEKREETRLMKTISKVKYEYKRG 608
Query: 696 RAERRAKVELDK 731
E+ A ELD+
Sbjct: 609 STEQLAS-ELDQ 619
>AC006617-1|AAF39770.2| 397|Caenorhabditis elegans Hypothetical
protein C39B5.6 protein.
Length = 397
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 508 KTALTMDKEQYLLSILMRCTKY*AATTIMVEIIDWLLVLYKKTQR 642
++A+ + +E LLS + RC +Y A T V+I+ W+ L QR
Sbjct: 230 RSAVHIAEEPELLSFVKRCIRYKAPTVTPVDILYWMKELKTVMQR 274
>U29378-4|AAA68727.2| 667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 197 protein.
Length = 667
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +3
Query: 333 KNSTIMLLNLYETKIHMLDNPKKKSKMWISIAEELKSLNV-EVTADQVRWKINALTKKYK 509
KN + L+N Y+ + ++DN + K +I EL+ ++ + + + I + K
Sbjct: 502 KNKHVFLINNYDLILSIIDNEESKHTKIYAIVHELEQKSIDDFVEEMLEPHIGYMIKFVN 561
Query: 510 DC---IDNGQGAVSFKYFNEMHQILGRYN 587
+C I G + +Y +++ ++ +N
Sbjct: 562 ECESLIVQGHTQLLVRYNDKVGTVVANFN 590
>Z78417-10|CAB01688.2| 745|Caenorhabditis elegans Hypothetical
protein C35C5.2 protein.
Length = 745
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +3
Query: 306 MNKQNIIWTKNSTIMLLNLYETKIHMLDNPKKKSKMWISIAEELKSLNVEVTADQVRWKI 485
M ++ ST+ L + IH K +SIA +K L + D +R +
Sbjct: 1 MKASGVVLVAVSTVALTIILSNAIHQSYKSNSKPLPKLSIATNIKQL---INVDNIRSNL 57
Query: 486 NALTKK 503
++LTKK
Sbjct: 58 HSLTKK 63
>Z81583-2|CAB04670.1| 314|Caenorhabditis elegans Hypothetical
protein T02G6.2 protein.
Length = 314
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 276 SQQEESDVNEMN---KQNIIWTKNSTIMLLNLYETKIHMLDNPKKK 404
S QE++DVNE+ + I + K + + + NLY ++ PKKK
Sbjct: 268 SLQEQADVNEVLEIIRNQIFYLKYNFLKISNLYSQQMRSNAEPKKK 313
>Z81483-3|CAB03961.1| 152|Caenorhabditis elegans Hypothetical
protein C43D7.5 protein.
Length = 152
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +3
Query: 171 ENIHNNVAVLAILDSQPNLYKPNMPVPTYNHNQNISQQEESDVNEMNKQN 320
+N N +D + N T N N N + QEE DVN M ++N
Sbjct: 17 DNCDNTNTYSHTVDRKDNFDNTTTNTKTVNRNDNCNNQEEGDVN-MYRRN 65
>Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical protein
F36G3.1 protein.
Length = 964
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 QPNLYK-PNMPVPTY-NHNQNISQQEESDVNEMNKQNIIWTKNSTIMLLNLYETKIHMLD 389
+ LYK NM + + +S + E E+NKQ +I + S L + ++ K+ L+
Sbjct: 794 EATLYKMKNMERDRFLSREAQMSMEIEDLQRELNKQKLILNQTSMAKLADTFDRKVLHLE 853
Query: 390 NPKKKSKMWI 419
N ++ M I
Sbjct: 854 NELRERDMLI 863
>AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical
protein Y45F10D.7 protein.
Length = 893
Score = 28.7 bits (61), Expect = 4.7
Identities = 28/137 (20%), Positives = 61/137 (44%), Gaps = 2/137 (1%)
Frame = +3
Query: 267 QNISQQEESDVNEM-NKQNIIWTKNSTIMLLNLYETKIHMLDNPKKKSKMWISIAE-ELK 440
+NI + + D + +K+N++ ++S LL +T+ H+LD K M +S + +++
Sbjct: 742 ENIGDEMDGDSRYITSKRNLLELESSFTTLLRNAKTRDHLLDAFKTLQNMSLSAIDFQIR 801
Query: 441 SLNVEVTADQVRWKINALTKKYKDCIDNGQGAVSFKYFNEMHQILGRYNDNGGNYRLASG 620
+LN + R + L K + A + K I+ ++ + +
Sbjct: 802 TLNPKTIPIFFRMLLEVLKTKTNFELVQAYAATATKIH---RTIMWNASEGASEHEELTE 858
Query: 621 VIQEDAEKSKDRKNLMK 671
V++E A+ + N M+
Sbjct: 859 VLEEMAQVQMESWNEME 875
>Z74032-8|CAA98462.3| 325|Caenorhabditis elegans Hypothetical
protein F35B12.1 protein.
Length = 325
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -3
Query: 412 IFDFFLGLSNICILVSYKFSNIIVEFFVQMIFCLFISFTSDSSCW 278
IFDF + ++ Y+F II+EFF + ++ +TS W
Sbjct: 126 IFDFKITFLITLLMFIYRFVKIILEFFHYIPLECWMVYTSYDLAW 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,100,964
Number of Sequences: 27780
Number of extensions: 342582
Number of successful extensions: 1071
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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