Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_N23
(785 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54342-17|CAA91155.2| 365|Caenorhabditis elegans Hypothetical p... 29 3.8
Z49913-8|CAA90148.2| 365|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical ... 29 5.0
AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical ... 29 5.0
AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical ... 29 5.0
AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical ... 29 5.0
AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical ... 29 5.0
AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic AMP-re... 29 5.0
AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic AMP-re... 29 5.0
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 28 6.6
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 28 6.6
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 28 6.6
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 28 6.6
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 28 6.6
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 28 6.6
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 28 6.6
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 28 6.6
Z73899-8|CAA98079.2| 669|Caenorhabditis elegans Hypothetical pr... 28 8.7
U80445-3|AAK68258.1| 85|Caenorhabditis elegans Antibacterial f... 28 8.7
AB029810-1|BAA89490.1| 85|Caenorhabditis elegans ABF-2 protein. 28 8.7
>Z54342-17|CAA91155.2| 365|Caenorhabditis elegans Hypothetical
protein C08H9.8 protein.
Length = 365
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 403 GDLIHYFNIKCNQQLAEQMKLWPQEDLKGGLKVPAKFIENAIVTRLLMIKPYK 561
GDL++Y + A+Q +W ED G L +K IEN++ T L+ Y+
Sbjct: 152 GDLLNYLRQNRERFQAKQ-PIWSNEDNSGYLIPKSKPIENSLYTSGLLSFAYQ 203
>Z49913-8|CAA90148.2| 365|Caenorhabditis elegans Hypothetical
protein C08H9.8 protein.
Length = 365
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 403 GDLIHYFNIKCNQQLAEQMKLWPQEDLKGGLKVPAKFIENAIVTRLLMIKPYK 561
GDL++Y + A+Q +W ED G L +K IEN++ T L+ Y+
Sbjct: 152 GDLLNYLRQNRERFQAKQ-PIWSNEDNSGYLIPKSKPIENSLYTSGLLSFAYQ 203
>AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical
protein Y41C4A.4e protein.
Length = 306
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 316 TGWSVESLSAGAKSAGYPTITHGLFPNGGGDL 411
T W LS G S+ PT+T G GGG L
Sbjct: 207 TDWQSPMLSGGYSSSPSPTMTGGSMRMGGGPL 238
>AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical
protein Y41C4A.4d protein.
Length = 331
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 316 TGWSVESLSAGAKSAGYPTITHGLFPNGGGDL 411
T W LS G S+ PT+T G GGG L
Sbjct: 232 TDWQSPMLSGGYSSSPSPTMTGGSMRMGGGPL 263
>AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical
protein Y41C4A.4c protein.
Length = 314
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 316 TGWSVESLSAGAKSAGYPTITHGLFPNGGGDL 411
T W LS G S+ PT+T G GGG L
Sbjct: 215 TDWQSPMLSGGYSSSPSPTMTGGSMRMGGGPL 246
>AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical
protein Y41C4A.4b protein.
Length = 327
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 316 TGWSVESLSAGAKSAGYPTITHGLFPNGGGDL 411
T W LS G S+ PT+T G GGG L
Sbjct: 228 TDWQSPMLSGGYSSSPSPTMTGGSMRMGGGPL 259
>AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical
protein Y41C4A.4a protein.
Length = 325
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 316 TGWSVESLSAGAKSAGYPTITHGLFPNGGGDL 411
T W LS G S+ PT+T G GGG L
Sbjct: 226 TDWQSPMLSGGYSSSPSPTMTGGSMRMGGGPL 257
>AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 gamma 2 protein.
Length = 325
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 316 TGWSVESLSAGAKSAGYPTITHGLFPNGGGDL 411
T W LS G S+ PT+T G GGG L
Sbjct: 226 TDWQSPMLSGGYSSSPSPTMTGGSMRMGGGPL 257
>AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 beta protein.
Length = 306
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 316 TGWSVESLSAGAKSAGYPTITHGLFPNGGGDL 411
T W LS G S+ PT+T G GGG L
Sbjct: 207 TDWQSPMLSGGYSSSPSPTMTGGSMRMGGGPL 238
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 79 WNMSNLQKILRLFRTQHRFILPLSSVNIRNIQGTVKDYNHSEVR 210
WN + QK++ F T + S N++ I + + H EVR
Sbjct: 35 WNKGDSQKLMTNFGTPRNTNTRVKSENLQEIPEDIANRTHGEVR 78
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 79 WNMSNLQKILRLFRTQHRFILPLSSVNIRNIQGTVKDYNHSEVR 210
WN + QK++ F T + S N++ I + + H EVR
Sbjct: 243 WNKGDSQKLMTNFGTPRNTNTRVKSENLQEIPEDIANRTHGEVR 286
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 79 WNMSNLQKILRLFRTQHRFILPLSSVNIRNIQGTVKDYNHSEVR 210
WN + QK++ F T + S N++ I + + H EVR
Sbjct: 52 WNKGDSQKLMTNFGTPRNTNTRVKSENLQEIPEDIANRTHGEVR 95
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 79 WNMSNLQKILRLFRTQHRFILPLSSVNIRNIQGTVKDYNHSEVR 210
WN + QK++ F T + S N++ I + + H EVR
Sbjct: 35 WNKGDSQKLMTNFGTPRNTNTRVKSENLQEIPEDIANRTHGEVR 78
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 79 WNMSNLQKILRLFRTQHRFILPLSSVNIRNIQGTVKDYNHSEVR 210
WN + QK++ F T + S N++ I + + H EVR
Sbjct: 52 WNKGDSQKLMTNFGTPRNTNTRVKSENLQEIPEDIANRTHGEVR 95
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 79 WNMSNLQKILRLFRTQHRFILPLSSVNIRNIQGTVKDYNHSEVR 210
WN + QK++ F T + S N++ I + + H EVR
Sbjct: 222 WNKGDSQKLMTNFGTPRNTNTRVKSENLQEIPEDIANRTHGEVR 265
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 79 WNMSNLQKILRLFRTQHRFILPLSSVNIRNIQGTVKDYNHSEVR 210
WN + QK++ F T + S N++ I + + H EVR
Sbjct: 243 WNKGDSQKLMTNFGTPRNTNTRVKSENLQEIPEDIANRTHGEVR 286
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 79 WNMSNLQKILRLFRTQHRFILPLSSVNIRNIQGTVKDYNHSEVR 210
WN + QK++ F T + S N++ I + + H EVR
Sbjct: 52 WNKGDSQKLMTNFGTPRNTNTRVKSENLQEIPEDIANRTHGEVR 95
>Z73899-8|CAA98079.2| 669|Caenorhabditis elegans Hypothetical
protein ZK829.10 protein.
Length = 669
Score = 27.9 bits (59), Expect = 8.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 366 SHHYSWPLSKWRW 404
S Y+WP+ KWRW
Sbjct: 481 SRAYTWPIWKWRW 493
>U80445-3|AAK68258.1| 85|Caenorhabditis elegans Antibacterial
factor related protein2 protein.
Length = 85
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 223 IASVVTENEDHQYEQNVKDVILERALEFVSQTGWSVESLSAGA--KSAGYPTITHGLFPN 396
+A++V + D + IL++A + + T S+++ G+ K +G PT N
Sbjct: 12 LATIVAADIDFSTCARMDVPILKKAAQGLCITSCSMQNCGTGSCKKRSGRPTCVCYRCAN 71
Query: 397 GGGDL 411
GGGD+
Sbjct: 72 GGGDI 76
>AB029810-1|BAA89490.1| 85|Caenorhabditis elegans ABF-2 protein.
Length = 85
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 223 IASVVTENEDHQYEQNVKDVILERALEFVSQTGWSVESLSAGA--KSAGYPTITHGLFPN 396
+A++V + D + IL++A + + T S+++ G+ K +G PT N
Sbjct: 12 LATIVAADIDFSTCARMDVPILKKAAQGLCITSCSMQNCGTGSCKKRSGRPTCVCYRCAN 71
Query: 397 GGGDL 411
GGGD+
Sbjct: 72 GGGDI 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,372,888
Number of Sequences: 27780
Number of extensions: 334807
Number of successful extensions: 791
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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