Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_N16
(675 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q96AT9 Cluster: Ribulose-phosphate 3-epimerase; n=57; F... 174 1e-42
UniRef50_P46969 Cluster: Ribulose-phosphate 3-epimerase; n=19; F... 140 4e-32
UniRef50_Q9SE42 Cluster: Ribulose-phosphate 3-epimerase, cytopla... 139 5e-32
UniRef50_Q4Q431 Cluster: Ribulose-5-phosphate 3-epimerase, putat... 135 1e-30
UniRef50_O14105 Cluster: Ribulose-phosphate 3-epimerase; n=4; Eu... 133 3e-30
UniRef50_A6DM95 Cluster: Ribulose-phosphate 3-epimerase; n=1; Le... 119 6e-26
UniRef50_A0E8J5 Cluster: Chromosome undetermined scaffold_83, wh... 117 3e-25
UniRef50_Q5KNF9 Cluster: Ribulose-phosphate 3-epimerase, putativ... 117 3e-25
UniRef50_A5ZMI1 Cluster: Putative uncharacterized protein; n=2; ... 113 3e-24
UniRef50_Q6MJL8 Cluster: Probable ribulose-phosphate 3-epimerase... 112 6e-24
UniRef50_A7CQS7 Cluster: Ribulose-phosphate 3-epimerase precurso... 112 9e-24
UniRef50_Q1PZ79 Cluster: Strongly similar to D-ribulose-5-phosph... 111 1e-23
UniRef50_Q4XFJ9 Cluster: D-ribulose-5-phosphate 3-epimerase, put... 109 5e-23
UniRef50_Q4WZZ9 Cluster: Ribulose-phosphate 3-epimerase; n=16; P... 109 6e-23
UniRef50_Q4FWA2 Cluster: Ribulose-phosphate 3-epimerase, putativ... 108 1e-22
UniRef50_Q9RUI5 Cluster: Ribulose-phosphate 3-epimerase; n=35; B... 107 2e-22
UniRef50_Q7UX51 Cluster: Ribulose-phosphate 3-epimerase; n=2; Pl... 106 4e-22
UniRef50_Q2S6L6 Cluster: Ribulose-phosphate 3-epimerase; n=3; Ba... 106 4e-22
UniRef50_A6BJN0 Cluster: Putative uncharacterized protein; n=2; ... 106 4e-22
UniRef50_P65761 Cluster: Ribulose-phosphate 3-epimerase; n=50; B... 106 6e-22
UniRef50_Q60CZ3 Cluster: Ribulose-phosphate 3-epimerase, cytopla... 105 7e-22
UniRef50_Q67PQ3 Cluster: Ribulose-5-phosphate 3-epimerase; n=16;... 105 1e-21
UniRef50_Q8F3K8 Cluster: Ribulose-phosphate 3-epimerase; n=4; Le... 102 7e-21
UniRef50_A2U5A5 Cluster: Ribulose-phosphate 3-epimerase; n=1; Ba... 102 7e-21
UniRef50_A6LPY6 Cluster: Ribulose-phosphate 3-epimerase; n=1; Cl... 100 3e-20
UniRef50_A7DKK1 Cluster: Ribulose-phosphate 3-epimerase; n=3; Al... 100 4e-20
UniRef50_Q3W125 Cluster: Ribulose-phosphate 3-epimerase; n=2; Fr... 99 5e-20
UniRef50_Q6MD57 Cluster: Putative ribulose-phosphate 3-epimerase... 98 1e-19
UniRef50_Q83HT4 Cluster: D-ribulose-5-phosphate 3-epimerase; n=2... 98 2e-19
UniRef50_Q83AL2 Cluster: Ribulose-phosphate 3-epimerase; n=3; Co... 98 2e-19
UniRef50_Q8Y9M1 Cluster: Lmo0505 protein; n=13; Bacteria|Rep: Lm... 97 3e-19
UniRef50_Q8EW99 Cluster: D-ribulose-5-phosphate 3 epimerase; n=1... 97 3e-19
UniRef50_Q0LCN9 Cluster: Ribulose-phosphate 3-epimerase; n=1; He... 97 3e-19
UniRef50_Q97NN7 Cluster: Ribulose-phosphate 3-epimerase; n=35; L... 97 5e-19
UniRef50_Q30Y18 Cluster: Ribulose-phosphate 3-epimerase; n=2; De... 96 8e-19
UniRef50_A3EQR0 Cluster: Pentose-5-phosphate-3-epimerase; n=1; L... 95 1e-18
UniRef50_O67098 Cluster: Ribulose-phosphate 3-epimerase; n=3; Ba... 95 1e-18
UniRef50_Q8KBW2 Cluster: Ribulose-phosphate 3-epimerase; n=22; B... 95 2e-18
UniRef50_A4ECC8 Cluster: Putative uncharacterized protein; n=1; ... 95 2e-18
UniRef50_Q5P9J8 Cluster: Ribulose-phosphate 3-epimerase; n=9; Ri... 94 2e-18
UniRef50_Q5L0R7 Cluster: Ribulose-phosphate 3-epimerase; n=8; Ba... 94 3e-18
UniRef50_O34557 Cluster: Ribulose-phosphate 3-epimerase; n=28; B... 94 3e-18
UniRef50_Q1IVM1 Cluster: Ribulose-phosphate 3-epimerase; n=6; Ba... 93 7e-18
UniRef50_Q7QYY2 Cluster: GLP_164_20691_19966; n=2; Eukaryota|Rep... 93 7e-18
UniRef50_UPI000050F74E Cluster: COG0036: Pentose-5-phosphate-3-e... 92 1e-17
UniRef50_A6LQV5 Cluster: Ribulose-phosphate 3-epimerase; n=1; Cl... 92 1e-17
UniRef50_Q6L0S2 Cluster: Ribulose-phosphate 3-epimerase; n=4; Th... 92 1e-17
UniRef50_Q5FJI0 Cluster: Ribulose-phosphate 3-epimerase; n=5; La... 91 2e-17
UniRef50_A4M924 Cluster: Ribulose-phosphate 3-epimerase; n=2; Ba... 91 2e-17
UniRef50_Q43157 Cluster: Ribulose-phosphate 3-epimerase, chlorop... 91 2e-17
UniRef50_O84123 Cluster: Ribulose-phosphate 3-epimerase; n=13; C... 91 2e-17
UniRef50_O66107 Cluster: Ribulose-phosphate 3-epimerase; n=2; Tr... 91 3e-17
UniRef50_A6T960 Cluster: Putative ribulose-phosphate 3-epimerase... 89 7e-17
UniRef50_Q8A0S5 Cluster: Ribulose-phosphate 3-epimerase; n=5; Ba... 88 2e-16
UniRef50_A5IY03 Cluster: Ribulose-phosphate 3-epimerase; n=2; My... 87 4e-16
UniRef50_P32719 Cluster: D-allulose-6-phosphate 3-epimerase; n=1... 87 4e-16
UniRef50_Q746Z3 Cluster: Ribulose-phosphate 3-epimerase; n=13; B... 86 6e-16
UniRef50_A5FUG9 Cluster: Ribulose-phosphate 3-epimerase; n=2; Ba... 86 6e-16
UniRef50_A6D9N1 Cluster: Pentose-5-phosphate-3-epimerase; n=2; G... 86 8e-16
UniRef50_A6LN69 Cluster: Ribulose-phosphate 3-epimerase; n=1; Th... 85 1e-15
UniRef50_P51013 Cluster: Ribulose-phosphate 3-epimerase; n=4; Pr... 85 2e-15
UniRef50_Q4FNU8 Cluster: Ribulose-phosphate 3-epimerase; n=5; Ba... 84 3e-15
UniRef50_Q97PJ6 Cluster: Ribulose-phosphate 3-epimerase family p... 84 3e-15
UniRef50_Q04539 Cluster: Ribulose-phosphate 3-epimerase, plasmid... 84 3e-15
UniRef50_P74061 Cluster: Ribulose-phosphate 3-epimerase; n=102; ... 83 6e-15
UniRef50_P0AG10 Cluster: Ribulose-phosphate 3-epimerase; n=293; ... 83 6e-15
UniRef50_Q8Y907 Cluster: Lmo0735 protein; n=10; Firmicutes|Rep: ... 83 8e-15
UniRef50_A5FRH0 Cluster: Ribulose-phosphate 3-epimerase; n=3; De... 82 1e-14
UniRef50_Q8Y416 Cluster: Lmo2661 protein; n=26; Firmicutes|Rep: ... 81 2e-14
UniRef50_Q07U53 Cluster: Ribulose-phosphate 3-epimerase; n=1; Rh... 81 2e-14
UniRef50_Q58093 Cluster: Ribulose-phosphate 3-epimerase; n=6; Me... 80 6e-14
UniRef50_A6T9A4 Cluster: D-allulose-6-phosphate 3-epimerase; n=1... 79 1e-13
UniRef50_Q9X243 Cluster: Ribulose-phosphate 3-epimerase; n=3; Th... 78 2e-13
UniRef50_Q2GE71 Cluster: Ribulose-phosphate 3-epimerase; n=1; Ne... 78 2e-13
UniRef50_Q8SRP6 Cluster: Ribulose-phosphate 3-epimerase; n=1; En... 77 4e-13
UniRef50_Q6F0H7 Cluster: Pentose-5-phosphate-3-epimerase; n=1; M... 75 1e-12
UniRef50_Q7VCA2 Cluster: Pentose-5-phosphate-3-epimerase; n=10; ... 75 2e-12
UniRef50_Q6KH83 Cluster: Ribulose-5-phosphate 3-epimerase; n=2; ... 75 2e-12
UniRef50_Q2SSL7 Cluster: Ribulose-phosphate 3-epimerase; n=3; Mo... 72 1e-11
UniRef50_A6LBP4 Cluster: Ribulose-phosphate 3-epimerase; n=1; Pa... 72 1e-11
UniRef50_A6LQT7 Cluster: Ribulose-phosphate 3-epimerase; n=1; Cl... 72 1e-11
UniRef50_Q8RD62 Cluster: Pentose-5-phosphate-3-epimerase; n=1; T... 71 2e-11
UniRef50_Q67LX3 Cluster: Ribulose-5-phosphate 3-epimerase; n=3; ... 71 2e-11
UniRef50_A0RTR4 Cluster: Transketolase, N-terminal subunit; n=1;... 71 3e-11
UniRef50_Q4AAI3 Cluster: Ribulose-phosphate 3-epimerase; n=5; My... 70 5e-11
UniRef50_Q5EU44 Cluster: Ribulose-phosphate 3-epimerase; n=2; Bu... 70 6e-11
UniRef50_P39362 Cluster: Protein sgcE; n=6; Enterobacteriaceae|R... 69 8e-11
UniRef50_Q7NAL1 Cluster: Rpe; n=2; Mycoplasma gallisepticum|Rep:... 68 2e-10
UniRef50_Q24T41 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_A5KKQ4 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_Q8D1X6 Cluster: Rpe protein; n=1; Wigglesworthia glossi... 63 7e-09
UniRef50_Q6F1P3 Cluster: Pentose-5-phosphate-3-epimerase; n=1; M... 62 9e-09
UniRef50_Q6MTK7 Cluster: Ribulose-phosphate 3-epimerase; n=2; My... 62 1e-08
UniRef50_P56188 Cluster: Ribulose-phosphate 3-epimerase; n=24; E... 62 2e-08
UniRef50_A7DRC2 Cluster: Ribulose-phosphate 3-epimerase; n=1; Ca... 61 3e-08
UniRef50_Q3WJM9 Cluster: Ribulose-phosphate 3-epimerase; n=1; Fr... 58 2e-07
UniRef50_P75522 Cluster: Probable ribulose-phosphate 3-epimerase... 58 2e-07
UniRef50_Q9PQ34 Cluster: D-ribulose-5-phosphate 3 epimerase; n=1... 55 1e-06
UniRef50_A6CC62 Cluster: Ribulose-phosphate 3-epimerase; n=1; Pl... 55 2e-06
UniRef50_A5KTL0 Cluster: Ribulose-phosphate 3-epimerase; n=1; ca... 52 1e-05
UniRef50_Q14K80 Cluster: Ribulose-phosphate 3-epimerase; n=2; eu... 50 7e-05
UniRef50_Q9CLF5 Cluster: Dod; n=4; Pasteurellaceae|Rep: Dod - Pa... 46 0.001
UniRef50_A5Z893 Cluster: Putative uncharacterized protein; n=1; ... 41 0.024
UniRef50_Q986S1 Cluster: Ribulose-5-phosphate 3-epimerase; n=3; ... 39 0.13
UniRef50_UPI0000EBF232 Cluster: PREDICTED: similar to mucin 16; ... 38 0.22
UniRef50_O80585 Cluster: Methylenetetrahydrofolate reductase 2; ... 37 0.39
UniRef50_Q7UWN5 Cluster: Nitrite reductase [NAD(P)H] large subun... 36 1.2
UniRef50_A0LHX6 Cluster: Sensor protein; n=1; Syntrophobacter fu... 34 2.7
UniRef50_Q3ZWZ3 Cluster: Histone acetyltransferase, ELP3 family;... 34 3.6
UniRef50_Q2JC19 Cluster: Ribulose-phosphate 3-epimerase; n=1; Fr... 34 3.6
UniRef50_Q05FR4 Cluster: Ribulose-phosphate 3-epimerase; n=1; Ca... 33 6.3
UniRef50_UPI00015BAFD7 Cluster: Reverse gyrase; n=1; Ignicoccus ... 33 8.4
>UniRef50_Q96AT9 Cluster: Ribulose-phosphate 3-epimerase; n=57;
Fungi/Metazoa group|Rep: Ribulose-phosphate 3-epimerase
- Homo sapiens (Human)
Length = 228
Score = 174 bits (424), Expect = 1e-42
Identities = 78/129 (60%), Positives = 98/129 (75%)
Frame = +3
Query: 288 KDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPG 467
+D FF+ HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMKVG+AIKPG
Sbjct: 63 QDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG 122
Query: 468 TPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPST 647
T V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LDIEVDGGVGP T
Sbjct: 123 TSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDT 182
Query: 648 INCCANAGA 674
++ CA AGA
Sbjct: 183 VHKCAEAGA 191
Score = 80.2 bits (189), Expect = 4e-14
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSE 268
IGPSILN+DL+ L E ++LD+GADYLHLDVMDG FVPN+TFGHP E
Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVE 55
>UniRef50_P46969 Cluster: Ribulose-phosphate 3-epimerase; n=19;
Fungi/Metazoa group|Rep: Ribulose-phosphate 3-epimerase
- Saccharomyces cerevisiae (Baker's yeast)
Length = 238
Score = 140 bits (338), Expect = 4e-32
Identities = 64/127 (50%), Positives = 85/127 (66%)
Frame = +3
Query: 294 AFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTP 473
AFF+ HMMVE PE+W+ A G +Q+TFH E +D + + + ++ G+K AIKPGT
Sbjct: 75 AFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKAACAIKPGTS 134
Query: 474 VSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPSTIN 653
V + + DM L+MTVEPGFGGQKFME+ M KV+ LR +P L+I+VDGG+G TI
Sbjct: 135 VDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHLNIQVDGGLGKETIP 194
Query: 654 CCANAGA 674
A AGA
Sbjct: 195 KAAKAGA 201
Score = 62.9 bits (146), Expect = 7e-09
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +2
Query: 110 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
+K +I PSIL +D + L E K+++ GAD+LH+DVMDG FVPN+T G P
Sbjct: 2 VKPIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQP 51
>UniRef50_Q9SE42 Cluster: Ribulose-phosphate 3-epimerase,
cytoplasmic isoform; n=10; Eukaryota|Rep:
Ribulose-phosphate 3-epimerase, cytoplasmic isoform -
Oryza sativa subsp. japonica (Rice)
Length = 228
Score = 139 bits (337), Expect = 5e-32
Identities = 66/131 (50%), Positives = 92/131 (70%), Gaps = 4/131 (3%)
Frame = +3
Query: 294 AFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVI-EVCRKVREHGMKVGVAIKPGT 470
A+ + H+MV P ++ P+A AG + +TFHIE +D E+ + ++ GM+ GV+++PGT
Sbjct: 65 AYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGT 124
Query: 471 PVSEVEKYISIS---DMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGP 641
PV EV + ++VL+MTVEPGFGGQKFM M KV+ LR+ YP LDIEVDGG+GP
Sbjct: 125 PVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGP 184
Query: 642 STINCCANAGA 674
STI+ A+AGA
Sbjct: 185 STIDVAASAGA 195
Score = 60.1 bits (139), Expect = 5e-08
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +2
Query: 116 ALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
A I PS+L++D + L E+ +++ GAD+LH+D+MDG FVPNLT G P
Sbjct: 7 AKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAP 54
>UniRef50_Q4Q431 Cluster: Ribulose-5-phosphate 3-epimerase,
putative; n=6; Trypanosomatidae|Rep:
Ribulose-5-phosphate 3-epimerase, putative - Leishmania
major
Length = 262
Score = 135 bits (326), Expect = 1e-30
Identities = 66/137 (48%), Positives = 89/137 (64%), Gaps = 3/137 (2%)
Frame = +3
Query: 273 LRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGV 452
LR + + F + H MV P+QW+ +A AG + YTFHIE D V +R HGM+VGV
Sbjct: 83 LRARFPNVFLDVHCMVSDPKQWVPSIAKAGGSGYTFHIEATNDSKGVAEHIRAHGMQVGV 142
Query: 453 AIKPGTPVS-EVEKYIS--ISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEV 623
A+KP T ++ E+ I D VL+MTVEPGFGGQ F++ +++ + LR NYP L+I V
Sbjct: 143 AVKPATNLTQELRDLIEGHYVDQVLVMTVEPGFGGQSFIQERLSFISELRRNYPHLNIGV 202
Query: 624 DGGVGPSTINCCANAGA 674
DGG+GPST A+AGA
Sbjct: 203 DGGIGPSTAVQAADAGA 219
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +2
Query: 110 LKALIGPSILNADLSQLYEESQKLLD--NGA-DYLHLDVMDGQFVPNLTFG 253
L+A+I PSIL AD +L +E ++ GA +++H+DVMDG VPN++ G
Sbjct: 26 LEAIIDPSILAADFCKLGDEVASVVSPAGGAVEWIHVDVMDGHMVPNISIG 76
>UniRef50_O14105 Cluster: Ribulose-phosphate 3-epimerase; n=4;
Eukaryota|Rep: Ribulose-phosphate 3-epimerase -
Schizosaccharomyces pombe (Fission yeast)
Length = 228
Score = 133 bits (322), Expect = 3e-30
Identities = 60/129 (46%), Positives = 88/129 (68%)
Frame = +3
Query: 288 KDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPG 467
++AFF+ H+MV +PE++I +ADAG + + FH E + E+ + E GM VG A+KP
Sbjct: 63 EEAFFDCHLMVIEPERYIDQLADAGASLFCFHYEATEKHEEIISRAHEKGMLVGCALKPK 122
Query: 468 TPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPST 647
TPV + ++ DMVL+MTVEPG GGQ FM + KV++LR+ YP L++EVDGG+ T
Sbjct: 123 TPVEVILPFVEKLDMVLVMTVEPGKGGQSFMPECLPKVEFLRKKYPTLNVEVDGGLSLKT 182
Query: 648 INCCANAGA 674
++ A+AGA
Sbjct: 183 VDAAADAGA 191
Score = 56.8 bits (131), Expect = 4e-07
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +2
Query: 110 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
++A I PS+L D + L +E ++L G+D+LH+DVMD QFVPNLT G
Sbjct: 2 VQAKIAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIG 49
>UniRef50_A6DM95 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Ribulose-phosphate
3-epimerase - Lentisphaera araneosa HTCC2155
Length = 220
Score = 119 bits (287), Expect = 6e-26
Identities = 54/128 (42%), Positives = 79/128 (61%)
Frame = +3
Query: 291 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGT 470
+A F+ H+M+ P+++I A AG + TFHIE D EV ++ +GM G+ +KPGT
Sbjct: 68 EALFDAHLMISHPQKYIEEFAQAGCDHVTFHIESDCDTQEVIDQIHSYGMSAGLTLKPGT 127
Query: 471 PVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPSTI 650
+ + ++ +MVLIMTVEPGFGGQ FM + + ++ +RE P L I+VDGGV T
Sbjct: 128 DIETLLPFVDKIEMVLIMTVEPGFGGQSFMHDMVERITIIREANPKLHIQVDGGVNKETS 187
Query: 651 NCCANAGA 674
+AGA
Sbjct: 188 KIVRDAGA 195
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
++ PSIL AD + L E + GA ++HLDVMDG FVPN++FG
Sbjct: 12 IVSPSILAADFANLAPEVSGAHEAGAQFIHLDVMDGHFVPNISFG 56
>UniRef50_A0E8J5 Cluster: Chromosome undetermined scaffold_83, whole
genome shotgun sequence; n=2; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_83, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 199
Score = 117 bits (281), Expect = 3e-25
Identities = 57/141 (40%), Positives = 89/141 (63%), Gaps = 5/141 (3%)
Frame = +3
Query: 267 KCLRGKIKD-AFFETHMMVEKPEQWITPMADAGVNQYTFHIEP-VKDVIEVCRKVREHGM 440
KCL ++++ F + H M+++P +WI +++AG +Q T H E + ++ E+ + +R GM
Sbjct: 27 KCLTQRLQNRTFIDLHCMIQEPRKWIKDLSNAGGHQMTVHYESDIGNIEELSQMIRNAGM 86
Query: 441 KVGVAIKPGTPVSEVEKYI---SISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLL 611
+ +A+KP T + I + DM+LIMTVEPGFGGQKFM + + KV LR+ YP +
Sbjct: 87 RPALALKPKTLIDHTLIEIFDKQLFDMILIMTVEPGFGGQKFMADMLPKVTQLRQRYPKI 146
Query: 612 DIEVDGGVGPSTINCCANAGA 674
DI++DGGV + C AGA
Sbjct: 147 DIQLDGGVNCDNVISCYEAGA 167
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +2
Query: 191 GADYLHLDVMDGQFVPNLTFGHPXSEVPSRKNKRCLF*NSH 313
G D+LHLDVMDG FVPNLTFG P + +++ + F + H
Sbjct: 2 GVDWLHLDVMDGHFVPNLTFGPPIIKCLTQRLQNRTFIDLH 42
>UniRef50_Q5KNF9 Cluster: Ribulose-phosphate 3-epimerase, putative;
n=3; Basidiomycota|Rep: Ribulose-phosphate 3-epimerase,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 224
Score = 117 bits (281), Expect = 3e-25
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Frame = +3
Query: 285 IKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKP 464
+ + F + HMMV P QW+ +A AG YTFH E ++ +V V H M G+AI P
Sbjct: 60 VPNIFMDCHMMVSNPSQWVPEVAKAGGKLYTFHYEATEEPEKVIELVHSHNMLAGLAISP 119
Query: 465 GTPVSEVEKYIS-ISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGP 641
TP S + + +D++L+MTV PG GGQ+FM + KV+ LRE +P +I+VDGGVG
Sbjct: 120 ETPASAITDSLGKAADLLLVMTVRPGRGGQRFMPECLEKVKELRERFPGKNIQVDGGVGS 179
Query: 642 STINCCANAGA 674
CA AG+
Sbjct: 180 GNACQCAQAGS 190
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/52 (55%), Positives = 39/52 (75%)
Frame = +2
Query: 113 KALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSE 268
KA+I PS+L +DLS L E ++++ NG D+LH+DVMDG FVPN+T G P E
Sbjct: 3 KAIISPSVLASDLSDLSNECRRMMANGCDWLHMDVMDGHFVPNITMGAPILE 54
>UniRef50_A5ZMI1 Cluster: Putative uncharacterized protein; n=2;
Ruminococcus|Rep: Putative uncharacterized protein -
Ruminococcus obeum ATCC 29174
Length = 224
Score = 113 bits (273), Expect = 3e-24
Identities = 54/130 (41%), Positives = 79/130 (60%), Gaps = 4/130 (3%)
Frame = +3
Query: 297 FFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPV 476
FF+ H+MV PE++I D G + T H E +D+ +R+ G+KVGV+IKP TPV
Sbjct: 62 FFDVHLMVSAPERYIQDFVDCGADSITVHAEACEDLERAIELIRDAGVKVGVSIKPATPV 121
Query: 477 SEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPL----LDIEVDGGVGPS 644
+++ + DMVLIMTV+PGFGGQK++ K++ L+E +DI+VDGG+
Sbjct: 122 NDISHLLEDVDMVLIMTVQPGFGGQKYLPECTEKIEELKELIDREELDVDIQVDGGINDE 181
Query: 645 TINCCANAGA 674
T+ AGA
Sbjct: 182 TMETVMKAGA 191
Score = 57.6 bits (133), Expect = 3e-07
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Frame = +2
Query: 128 PSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSEVPSRKNKRCLF*N 307
PSIL+AD ++L E+ Q L G ++LH+DVMDG FVP+++FG P + S + + +F +
Sbjct: 7 PSILSADFNRLGEQIQTLEKAGVEWLHIDVMDGDFVPSISFGMPV--IRSIRKESKMFFD 64
Query: 308 SH---DG*ETRAMDNTNG*CWSQSIHISYRTCQRCNRSVQ 418
H E D + C + SI + C+ R+++
Sbjct: 65 VHLMVSAPERYIQDFVD--CGADSITVHAEACEDLERAIE 102
>UniRef50_Q6MJL8 Cluster: Probable ribulose-phosphate 3-epimerase;
n=1; Bdellovibrio bacteriovorus|Rep: Probable
ribulose-phosphate 3-epimerase - Bdellovibrio
bacteriovorus
Length = 210
Score = 112 bits (270), Expect = 6e-24
Identities = 55/134 (41%), Positives = 79/134 (58%), Gaps = 5/134 (3%)
Frame = +3
Query: 282 KIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIK 461
K+ + H+M+E+PE+++ AG + T H+E KD +++RE G K G+ ++
Sbjct: 54 KVSPLPLDVHLMIEEPERYVEEFVKAGSDYLTIHVESTKDAAGTLKRIRELGAKPGITLR 113
Query: 462 PGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR-----ENYPLLDIEVD 626
P T V EV + + D+VL+MTVEPGFGGQ FM +Q+AK+ LR EN L IEVD
Sbjct: 114 PRTAVEEVLPLLPLCDLVLVMTVEPGFGGQSFMNDQVAKITRLRQEISSENLSCL-IEVD 172
Query: 627 GGVGPSTINCCANA 668
GG+ T C A
Sbjct: 173 GGINAETAKICHEA 186
Score = 59.3 bits (137), Expect = 8e-08
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
++ PSIL+AD + L +E + + GAD++H+DVMDG+FVPN+T G P
Sbjct: 1 MVAPSILSADFANLEKEIKAVAQAGADWIHVDVMDGRFVPNITIGIP 47
>UniRef50_A7CQS7 Cluster: Ribulose-phosphate 3-epimerase precursor;
n=1; Opitutaceae bacterium TAV2|Rep: Ribulose-phosphate
3-epimerase precursor - Opitutaceae bacterium TAV2
Length = 220
Score = 112 bits (269), Expect = 9e-24
Identities = 53/137 (38%), Positives = 82/137 (59%), Gaps = 4/137 (2%)
Frame = +3
Query: 273 LRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGV 452
LR + FF+TH+M+++P ++I P A AG N + HIEP D R++RE G + G+
Sbjct: 58 LRPTLPGLFFDTHLMLDEPHRYIEPFAKAGANLISIHIEPAYDHAATLRRIRELGCQNGI 117
Query: 453 AIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKV----QYLRENYPLLDIE 620
+ PGTP +E +++ D+VL+MTV+PGFGGQ F + + K+ ++ E +E
Sbjct: 118 VLNPGTPADAIEPHLAHVDLVLVMTVQPGFGGQSFRRDMLPKIAQIDRWRAERGLRFRLE 177
Query: 621 VDGGVGPSTINCCANAG 671
VDGG+ +T CA G
Sbjct: 178 VDGGIDLATGAECAAVG 194
Score = 53.2 bits (122), Expect = 6e-06
Identities = 26/70 (37%), Positives = 43/70 (61%)
Frame = +2
Query: 104 RHLKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSEVPSRK 283
+H +L+ PS+L + ++L + +Q + + +LHLD+MDG FVPNL+FG P + R
Sbjct: 2 KHHASLLAPSLLAGNHARLADSAQIVASHAIPWLHLDIMDGHFVPNLSFG-PQTVADLRP 60
Query: 284 NKRCLF*NSH 313
LF ++H
Sbjct: 61 TLPGLFFDTH 70
>UniRef50_Q1PZ79 Cluster: Strongly similar to D-ribulose-5-phosphate
3-epimerase; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Strongly similar to
D-ribulose-5-phosphate 3-epimerase - Candidatus Kuenenia
stuttgartiensis
Length = 232
Score = 111 bits (267), Expect = 1e-23
Identities = 54/134 (40%), Positives = 82/134 (61%), Gaps = 3/134 (2%)
Frame = +3
Query: 282 KIKDAFFETHMMVEKPEQWITPMADA--GVNQYTFHIEPVKDVIEVCRKVREHGMKVGVA 455
+I + + H+M+E PE+++ A A G TFHIE VK+ E+ ++ GMKVG++
Sbjct: 59 RITNIPLDIHLMIEHPERYVEAFAGAAEGNGIITFHIETVKNPKEIISLIKSTGMKVGIS 118
Query: 456 IKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYP-LLDIEVDGG 632
+ PGTPV +E ++ DM L+M+V PGF GQKF+ + K+ LR+ P +DI+VDGG
Sbjct: 119 LNPGTPVEMIENFLDQVDMALVMSVNPGFAGQKFIPIALPKIARLRDKAPDKMDIQVDGG 178
Query: 633 VGPSTINCCANAGA 674
+ P I+ GA
Sbjct: 179 ITPDNISQVVKQGA 192
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +2
Query: 113 KALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
K I SIL A+ + EE +++ G D +H+DVMDG FVPN+T G
Sbjct: 4 KIKISASILAANPMRFEEEIKRIEAAGIDLIHIDVMDGHFVPNITIG 50
>UniRef50_Q4XFJ9 Cluster: D-ribulose-5-phosphate 3-epimerase,
putative; n=7; Plasmodium|Rep: D-ribulose-5-phosphate
3-epimerase, putative - Plasmodium chabaudi
Length = 227
Score = 109 bits (263), Expect = 5e-23
Identities = 56/140 (40%), Positives = 88/140 (62%), Gaps = 6/140 (4%)
Frame = +3
Query: 273 LRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVC----RKVREHGM 440
L+ + FF+ H+MVE PE++++ + + NQ TFH E + + +E C + ++ + M
Sbjct: 58 LKKYTNNIFFDVHLMVENPEKYVSLLKTS--NQLTFHFEALNEDVEKCIELAKVIKSNNM 115
Query: 441 KVGVAIKPGTPVSEVEKYI--SISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD 614
G++IKP T V ++ I ++ D VL+MTVEPGFGGQ FM + M+KV +LR+ Y L+
Sbjct: 116 WCGISIKPKTSVEKLVPIIDTNLIDTVLVMTVEPGFGGQSFMHDMMSKVSFLRKKYKNLN 175
Query: 615 IEVDGGVGPSTINCCANAGA 674
I+VDGG+ T A+ GA
Sbjct: 176 IQVDGGLNIETTEISASHGA 195
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/54 (51%), Positives = 45/54 (83%)
Frame = +2
Query: 98 MTRHLKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
MT+ ++A+I PS+L +++S+L EE++++ D GA+++HLDVMD FVPNL+FG P
Sbjct: 1 MTK-IEAIIAPSVLASNISKLAEETKRMEDLGAEWIHLDVMDMHFVPNLSFGPP 53
>UniRef50_Q4WZZ9 Cluster: Ribulose-phosphate 3-epimerase; n=16;
Pezizomycotina|Rep: Ribulose-phosphate 3-epimerase -
Aspergillus fumigatus (Sartorya fumigata)
Length = 313
Score = 109 bits (262), Expect = 6e-23
Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 23/148 (15%)
Frame = +3
Query: 300 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVI-----------------EVCRKVR 428
F+ HMM+ +P +W+ AG + Y FH E + E+ R +
Sbjct: 134 FDCHMMIMEPHKWVKEFKSAGCDLYCFHYEAAISSVAAMTPEDKETSRLTSPKELIRYIH 193
Query: 429 EHGMKVGVAIKPGTPVSEVEKYISISD------MVLIMTVEPGFGGQKFMENQMAKVQYL 590
+ GM+ G+AIKP TPV + + D MVL+MTV PGFGGQKFM +++ KV+ L
Sbjct: 194 DEGMQAGIAIKPDTPVDVLWDILENKDEKERPDMVLVMTVHPGFGGQKFMASELPKVKAL 253
Query: 591 RENYPLLDIEVDGGVGPSTINCCANAGA 674
RE YP L+IEVDGG+G TI+ A+AGA
Sbjct: 254 RERYPDLNIEVDGGLGLGTIDQAADAGA 281
Score = 63.3 bits (147), Expect = 5e-09
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = +2
Query: 86 SKTKMTRHLKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
S T T A+I PSIL+AD + L E + GAD+LH+D+MDG FVPN+TFG P
Sbjct: 56 SFTHPTMSPPAIIAPSILSADFAVLGNECSTKIAQGADWLHVDIMDGHFVPNMTFGAP 113
>UniRef50_Q4FWA2 Cluster: Ribulose-phosphate 3-epimerase, putative;
n=6; Trypanosomatidae|Rep: Ribulose-phosphate
3-epimerase, putative - Leishmania major strain Friedlin
Length = 253
Score = 108 bits (260), Expect = 1e-22
Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Frame = +3
Query: 273 LRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGV 452
LR + + F + H++V P +W+ A AG + + FH E ++ + VCRKVRE GM G+
Sbjct: 80 LRKHLPNTFLDCHLVVCNPIRWVDSFAKAGASTFVFHYEATENPVAVCRKVREAGMVAGI 139
Query: 453 AIKPGTPVSEVEKYISIS--DMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVD 626
A+ P TP + I DM L+M V GF GQ+F + KV+ +R+ YP L I+VD
Sbjct: 140 ALAPNTPAEVLFPIIDAGEVDMALVMCVPIGFAGQQFQMETVEKVRRMRQRYPHLLIQVD 199
Query: 627 GGVGPSTINCCANAGA 674
G + TI+ A AGA
Sbjct: 200 GSITLDTIDLVAAAGA 215
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLL-DNG--ADYLHLDVMDGQFVPNLTF 250
+I PS++ AD ++L +ES +L D G AD+LH+D++DG PN +F
Sbjct: 26 IISPSLMVADQTKLLQESLDVLSDKGGSADWLHVDIVDGHLAPNFSF 72
>UniRef50_Q9RUI5 Cluster: Ribulose-phosphate 3-epimerase; n=35;
Bacteria|Rep: Ribulose-phosphate 3-epimerase -
Deinococcus radiodurans
Length = 299
Score = 107 bits (258), Expect = 2e-22
Identities = 49/128 (38%), Positives = 79/128 (61%), Gaps = 4/128 (3%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+M+E+PE+++ A+AG + T H+E + + ++++E G K GV + PGTP+
Sbjct: 145 DVHLMIERPERYLRDFAEAGADSITVHVEATQHIHRAVQQIKELGKKAGVTLNPGTPLEA 204
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR----ENYPLLDIEVDGGVGPSTI 650
V ++ D+VL+M+V PGFGGQKF+ +V+ LR E P +++VDGGV P+
Sbjct: 205 VRPLLADVDLVLVMSVNPGFGGQKFIPASTERVRTLRGWLDEVNPQAELQVDGGVTPANA 264
Query: 651 NCCANAGA 674
A AGA
Sbjct: 265 RLLAEAGA 272
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
+ PSIL+ D S+L EE Q + GAD+ H+DVMDG FVPN++FG P
Sbjct: 88 LAPSILSCDFSRLGEELQAIA--GADWAHVDVMDGAFVPNISFGLP 131
>UniRef50_Q7UX51 Cluster: Ribulose-phosphate 3-epimerase; n=2;
Planctomycetaceae|Rep: Ribulose-phosphate 3-epimerase -
Rhodopirellula baltica
Length = 235
Score = 106 bits (255), Expect = 4e-22
Identities = 51/127 (40%), Positives = 77/127 (60%)
Frame = +3
Query: 291 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGT 470
D + H+M+ P + PM DAG + TFH+E V D +EV K+R+ G+ VGVAI P T
Sbjct: 71 DMPLDVHLMISDPIAYAQPMVDAGADLLTFHVEAVDDCVEVAGKIRDMGVGVGVAINPDT 130
Query: 471 PVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPSTI 650
++++ + DMVL+M+V GFGGQ+F + +++ L+E P L +E+DGG+ TI
Sbjct: 131 DFAKLDCCLDSVDMVLVMSVNAGFGGQQFNPVALDRLRSLKERKPDLLLEIDGGIKAETI 190
Query: 651 NCCANAG 671
AG
Sbjct: 191 GDARAAG 197
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/47 (55%), Positives = 29/47 (61%)
Frame = +2
Query: 128 PSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSE 268
PS+L D L E +KL G LHLDVMDG FVPNLT+G P E
Sbjct: 18 PSLLQCDFGDLRTEIEKLTVAGTRVLHLDVMDGHFVPNLTYGMPIVE 64
>UniRef50_Q2S6L6 Cluster: Ribulose-phosphate 3-epimerase; n=3;
Bacteria|Rep: Ribulose-phosphate 3-epimerase -
Salinibacter ruber (strain DSM 13855)
Length = 244
Score = 106 bits (255), Expect = 4e-22
Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 4/132 (3%)
Frame = +3
Query: 291 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGT 470
DA + H+M+E+P+Q++ ADAG + T H+E + V + +R G +VGVA+ P T
Sbjct: 82 DAQLDVHLMIEEPQQYVDTFADAGADMLTVHVEACPHLHRVAQTIRAAGCEVGVALNPAT 141
Query: 471 PVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD----IEVDGGVG 638
P+ +E + D+VL+M+V PGF GQ F+ AKVQ +R L +EVDGGV
Sbjct: 142 PLGHLEGILPFVDLVLVMSVNPGFSGQSFIPESTAKVQRVRRQLNALGSSAYVEVDGGVT 201
Query: 639 PSTINCCANAGA 674
P+ AGA
Sbjct: 202 PNNAMELVRAGA 213
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
+ PSI+ +D + + ++L G D+LH+DVMDG FVPN+T G
Sbjct: 24 LAPSIIASDSGRFAACADEVLGAGPDWLHVDVMDGHFVPNITIG 67
>UniRef50_A6BJN0 Cluster: Putative uncharacterized protein; n=2;
Clostridiales|Rep: Putative uncharacterized protein -
Dorea longicatena DSM 13814
Length = 221
Score = 106 bits (255), Expect = 4e-22
Identities = 53/132 (40%), Positives = 78/132 (59%), Gaps = 4/132 (3%)
Frame = +3
Query: 291 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGT 470
+ F + H+MV++P +++ AG + T H+E +DV K+RE GMKVG++I P T
Sbjct: 61 EQFMDAHLMVQEPIRYVEAFQKAGADSVTVHVEACEDVKATLNKIRECGMKVGLSINPET 120
Query: 471 PVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR----ENYPLLDIEVDGGVG 638
V EV Y+ DM+L+M V PGFGGQKF+ + K++ +R E DI+VDGGV
Sbjct: 121 DVKEVVPYLEEVDMILVMCVHPGFGGQKFIPESLDKIRAIRAMLNEKNLETDIQVDGGVY 180
Query: 639 PSTINCCANAGA 674
+ +AGA
Sbjct: 181 VENVREVLDAGA 192
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
++ PSIL AD L +E +K DNGA+Y+H DVMDG FVP+++FG P
Sbjct: 5 VLAPSILAADFKVLGQEMKKTEDNGAEYIHFDVMDGMFVPSISFGMP 51
>UniRef50_P65761 Cluster: Ribulose-phosphate 3-epimerase; n=50;
Bacteria|Rep: Ribulose-phosphate 3-epimerase -
Mycobacterium bovis
Length = 229
Score = 106 bits (254), Expect = 6e-22
Identities = 48/133 (36%), Positives = 78/133 (58%), Gaps = 4/133 (3%)
Frame = +3
Query: 285 IKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKP 464
+ D + H+M++ P++W P A+AG TFH E + + V R +R G K G+++KP
Sbjct: 61 VTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKP 120
Query: 465 GTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYP----LLDIEVDGG 632
GTP+ + D +L+M+VEPGFGGQ+F+ ++KV+ +R+ + +E+DGG
Sbjct: 121 GTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGG 180
Query: 633 VGPSTINCCANAG 671
+ TI A AG
Sbjct: 181 INDDTIEQAAEAG 193
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSE 268
LI PSIL AD ++L +E+ + NGAD+LH+DVMDG FVPNLT G P E
Sbjct: 9 LIAPSILAADFARLADEAAAV--NGADWLHVDVMDGHFVPNLTIGLPVVE 56
>UniRef50_Q60CZ3 Cluster: Ribulose-phosphate 3-epimerase,
cytoplasmic isoform, putative; n=3; Magnoliophyta|Rep:
Ribulose-phosphate 3-epimerase, cytoplasmic isoform,
putative - Solanum demissum (Wild potato)
Length = 273
Score = 105 bits (253), Expect = 7e-22
Identities = 56/131 (42%), Positives = 80/131 (61%), Gaps = 4/131 (3%)
Frame = +3
Query: 294 AFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVI-EVCRKVREHGMKVGVAIKPGT 470
A+ + H+MV P ++ P+ AG + +TFH+E +D E+ +K++ GMK GV++KPGT
Sbjct: 124 AYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEASRDNWQELVQKIKSKGMKPGVSLKPGT 183
Query: 471 PVSEVEKYI---SISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGP 641
P+ EV + + ++VL+MTVEPGFGGQKFM M K VDGG+GP
Sbjct: 184 PIEEVYPLLDGENSVELVLVMTVEPGFGGQKFMPEMMDK--------------VDGGLGP 229
Query: 642 STINCCANAGA 674
STI +AGA
Sbjct: 230 STIEAATSAGA 240
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/37 (45%), Positives = 31/37 (83%)
Frame = +2
Query: 110 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVM 220
+KA+I PS+L++D + L E++++L+ GAD+LH+D+M
Sbjct: 2 VKAIIAPSMLSSDFANLASEAERMLNCGADWLHMDIM 38
>UniRef50_Q67PQ3 Cluster: Ribulose-5-phosphate 3-epimerase; n=16;
Bacteria|Rep: Ribulose-5-phosphate 3-epimerase -
Symbiobacterium thermophilum
Length = 220
Score = 105 bits (251), Expect = 1e-21
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 6/132 (4%)
Frame = +3
Query: 297 FFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPV 476
FF+ H+M+ PE++I AG + T H E + V ++RE G+K GVA+ P TPV
Sbjct: 60 FFDAHLMIRHPERYIGDFVKAGADLITVHAEACDHLHRVLGQIREAGVKAGVALNPHTPV 119
Query: 477 SEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENY------PLLDIEVDGGVG 638
S + + + D+VLIMTV PGFGGQ+F++ + KV+ R ++I+VDGGV
Sbjct: 120 SVLAHVLDMVDLVLIMTVNPGFGGQRFIDACLPKVRQARAMLAEAGLADRVEIQVDGGVD 179
Query: 639 PSTINCCANAGA 674
P T C AGA
Sbjct: 180 PHTAPRCVEAGA 191
Score = 56.4 bits (130), Expect = 6e-07
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
+ PS+L+AD + L E + GAD+ HLDVMDG FVPN+TFG P
Sbjct: 3 VAPSLLSADFAALGAELAAIEAAGADWAHLDVMDGHFVPNITFGPP 48
>UniRef50_Q8F3K8 Cluster: Ribulose-phosphate 3-epimerase; n=4;
Leptospira|Rep: Ribulose-phosphate 3-epimerase -
Leptospira interrogans
Length = 215
Score = 102 bits (245), Expect = 7e-21
Identities = 50/118 (42%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+MV KPE + + TFHIE I + ++++ HG KVGV++ PGTPVS
Sbjct: 62 DVHLMVAKPENHVFKYYEFNPYCITFHIETTDFPIRLAQEIKSHGTKVGVSLNPGTPVSS 121
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRE--NYPLLDIEVDGGVGPSTI 650
+E + D++L+MTVEPGF GQKF+ N M K++ ++E ++IEVDGGV + I
Sbjct: 122 LENVLPYVDLILLMTVEPGFYGQKFIINGMDKIRKVKELIGSRPIEIEVDGGVNDTNI 179
Score = 39.5 bits (88), Expect = 0.073
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
I SIL L++L + D +H+DVMDG FVP ++FG
Sbjct: 3 ISASILATKLTELVKTVPNYDPTAIDLMHMDVMDGNFVPQISFG 46
>UniRef50_A2U5A5 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Bacillus coagulans 36D1|Rep: Ribulose-phosphate
3-epimerase - Bacillus coagulans 36D1
Length = 239
Score = 102 bits (245), Expect = 7e-21
Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 4/135 (2%)
Frame = +3
Query: 282 KIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIK 461
K+ D +TH+M+++PE++I AD G + + H E ++ +++ G+K GVAI
Sbjct: 56 KLTDKPLDTHLMIKQPERFIDLFADCGSDMISIHAEATDNLQGALARIKNKGLKAGVAIN 115
Query: 462 PGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRE----NYPLLDIEVDG 629
P TP+ ++ ++D V++MTV PGF GQKF+ K+ L E N ++IEVDG
Sbjct: 116 PATPLDVLDYVYDVTDYVVVMTVNPGFAGQKFIPAVYDKIARLHETITRNKFNIEIEVDG 175
Query: 630 GVGPSTINCCANAGA 674
+G STI C GA
Sbjct: 176 NIGASTIPACKENGA 190
Score = 55.2 bits (127), Expect = 1e-06
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
IGPS++ ADL +L E +++ + G D+ HLDVMDG FVPN T G
Sbjct: 4 IGPSLMCADLGRLAENIKEMDEAGVDFYHLDVMDGLFVPNFTLG 47
>UniRef50_A6LPY6 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Clostridium beijerinckii NCIMB 8052|Rep:
Ribulose-phosphate 3-epimerase - Clostridium
beijerinckii NCIMB 8052
Length = 223
Score = 100 bits (240), Expect = 3e-20
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Frame = +3
Query: 282 KIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIK 461
K+ DA F+ H+MV P++++ + +AG N T H E + + ++ G+K GVA+
Sbjct: 57 KLTDAEFDVHLMVTNPDEFVEALVEAGANSITIHSEVATHLYKSIHYLKSFGIKAGVALN 116
Query: 462 PGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR----ENYPLLDIEVDG 629
P TP+S +E S+ D VL+M+VEPGFGGQ F+ + K++ L EN ++VDG
Sbjct: 117 PATPISCLEHVYSLLDRVLVMSVEPGFGGQTFIPFSLEKIRKLNDIKSENNYGFTVQVDG 176
Query: 630 GVGPSTINCCANAGA 674
G+ I +GA
Sbjct: 177 GINLDNIEDVIKSGA 191
Score = 41.9 bits (94), Expect = 0.014
Identities = 14/48 (29%), Positives = 31/48 (64%)
Frame = +2
Query: 110 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
++ +I PS+L+A++ ++ + + +H+D+MDG +VPN++ G
Sbjct: 1 METIISPSLLSANVCNYSDDFKVFNEKNIQVIHIDIMDGHYVPNISIG 48
>UniRef50_A7DKK1 Cluster: Ribulose-phosphate 3-epimerase; n=3;
Alphaproteobacteria|Rep: Ribulose-phosphate 3-epimerase
- Methylobacterium extorquens PA1
Length = 280
Score = 100 bits (239), Expect = 4e-20
Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
Frame = +3
Query: 291 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGT 470
D F+ H+M+ + ++ A+AG + T H+E + + +R G + GVA+ PGT
Sbjct: 112 DKVFDVHLMIAPADPYLAAFAEAGADAITVHVEAGPHIHRSLQTIRGLGKRAGVALNPGT 171
Query: 471 PVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYP--LLDIEVDGGVGPS 644
P S +E + + D+VL+MTV PGFGGQ F+ + + V ++ +DI VDGG+ P
Sbjct: 172 PASAIEPLLDMVDLVLVMTVNPGFGGQSFIHSSLETVARVKAMTAGRSIDISVDGGITPE 231
Query: 645 TINCCANAGA 674
T A AGA
Sbjct: 232 TAGPAAQAGA 241
Score = 62.9 bits (146), Expect = 7e-09
Identities = 27/45 (60%), Positives = 36/45 (80%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
L+ PSIL AD S+L EE++ + GAD++HLDVMDG FVPN++FG
Sbjct: 56 LLAPSILAADFSRLGEETRAIAQAGADWIHLDVMDGHFVPNISFG 100
>UniRef50_Q3W125 Cluster: Ribulose-phosphate 3-epimerase; n=2;
Frankia|Rep: Ribulose-phosphate 3-epimerase - Frankia
sp. EAN1pec
Length = 254
Score = 99 bits (238), Expect = 5e-20
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
Frame = +3
Query: 282 KIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIK 461
++ D + H+M+E P++W A+ G T H E V D+ +R G + G+A+K
Sbjct: 48 RVTDTPLDCHLMIENPDRWAPGFAERGAANVTIHAEAVGDIARTTDAIRAAGARTGLAVK 107
Query: 462 PGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR----ENYPLLDIEVDG 629
P TPV + D++L+MT+EPGFGGQKFM+ + K+ R E L +++DG
Sbjct: 108 PATPVEHYLDDLHRFDLLLLMTIEPGFGGQKFMDEVLPKIAAARRLIDERGLDLWLQIDG 167
Query: 630 GVGPSTINCCANAG 671
GV TI A AG
Sbjct: 168 GVNRETIERSAEAG 181
Score = 36.7 bits (81), Expect = 0.51
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 134 ILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTF 250
+L AD ++ + ++ + + AD+LH+DVMD FVPNL F
Sbjct: 1 MLAADFGRIADAARAVAGH-ADWLHVDVMDYHFVPNLAF 38
>UniRef50_Q6MD57 Cluster: Putative ribulose-phosphate 3-epimerase;
n=1; Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ribulose-phosphate 3-epimerase - Protochlamydia
amoebophila (strain UWE25)
Length = 243
Score = 98.3 bits (234), Expect = 1e-19
Identities = 45/111 (40%), Positives = 66/111 (59%)
Frame = +3
Query: 297 FFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPV 476
F + H+M+ P +I AG + TFH+E +DV E +R+ ++ G+A P T V
Sbjct: 67 FLDVHLMIYNPFDYIERFVQAGADSITFHMEATEDVEETLAYIRKCNIRAGLAFNPETSV 126
Query: 477 SEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDG 629
S + KY+ DM+L+MTV PGFGGQKF+E + KVQ+ R+ L+I G
Sbjct: 127 SMIPKYLDKCDMILLMTVNPGFGGQKFIEKVLDKVQFTRDLCNQLNIRAGG 177
Score = 57.2 bits (132), Expect = 3e-07
Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 MTRHLKAL-IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
M R +A+ I PSIL D L +E++K GAD LHLD+MDG FVPNLT G
Sbjct: 1 MKREPQAVKIAPSILAGDFGHLADEAKKAEQAGADSLHLDIMDGHFVPNLTMG 53
>UniRef50_Q83HT4 Cluster: D-ribulose-5-phosphate 3-epimerase; n=2;
Tropheryma whipplei|Rep: D-ribulose-5-phosphate
3-epimerase - Tropheryma whipplei (strain TW08/27)
(Whipple's bacillus)
Length = 219
Score = 97.9 bits (233), Expect = 2e-19
Identities = 49/124 (39%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+MVE P+ W AD GV TFH E KD I R +R + KVG+A+ P T + E
Sbjct: 62 DVHLMVENPDYWALQYADLGVYSVTFHFEAAKDPIATARNIRSNKSKVGLAVSPDTDIGE 121
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYL-RENYPLLDIEVDGGVGPSTINCC 659
+ DM+ +MTV PGFGGQK + + K + R + L VDGGV I+
Sbjct: 122 CVHVLPEVDMLQVMTVYPGFGGQKLIRRVLDKFSRITRSEFENLSFSVDGGVTLGNISEI 181
Query: 660 ANAG 671
A+ G
Sbjct: 182 ASVG 185
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +2
Query: 110 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
+K I PSIL+AD L + Q L + AD +H+DVMDG FVPN+TFG P
Sbjct: 1 MKIRISPSILSADFCNLERDLQ--LISSADMVHVDVMDGHFVPNITFGLP 48
>UniRef50_Q83AL2 Cluster: Ribulose-phosphate 3-epimerase; n=3;
Coxiella burnetii|Rep: Ribulose-phosphate 3-epimerase -
Coxiella burnetii
Length = 222
Score = 97.9 bits (233), Expect = 2e-19
Identities = 51/140 (36%), Positives = 79/140 (56%), Gaps = 4/140 (2%)
Frame = +3
Query: 267 KCLRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKV 446
K LR A + H+MV+ P ++I P A+AG N TFH E VKDV + ++++ GM+V
Sbjct: 54 KALRDAKITAPIDVHLMVKNPNEFIKPFAEAGANLITFHPETVKDVEDTIARIKKAGMQV 113
Query: 447 GVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD---- 614
G+A P +S +++ D+VL+M+V PGF GQ FM + K+ R+ L
Sbjct: 114 GMAFNPEKSLSLFTSFLTKIDLVLLMSVNPGFAGQSFMAESLKKIAATRQLLDTLQSKAF 173
Query: 615 IEVDGGVGPSTINCCANAGA 674
+ +DGG+ + I + AGA
Sbjct: 174 LGIDGGIKINNIADVSRAGA 193
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +2
Query: 113 KALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
K +I SIL+AD S+L EE + ++ GAD +H DVMD FVPNL+FG
Sbjct: 3 KKIISASILSADFSRLGEEVKSVIQAGADNIHFDVMDHHFVPNLSFG 49
>UniRef50_Q8Y9M1 Cluster: Lmo0505 protein; n=13; Bacteria|Rep:
Lmo0505 protein - Listeria monocytogenes
Length = 216
Score = 97.5 bits (232), Expect = 3e-19
Identities = 47/128 (36%), Positives = 74/128 (57%), Gaps = 3/128 (2%)
Frame = +3
Query: 300 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVS 479
F+ HMMV +P+++I + +AG + T H E + + ++ +G++ GV + PGTP S
Sbjct: 62 FDVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPS 121
Query: 480 EVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRE---NYPLLDIEVDGGVGPSTI 650
+E + D +L+MTV PG GGQKF ++ + K++ + N P + IEVDGGV
Sbjct: 122 TLEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRP-IQIEVDGGVNDELA 180
Query: 651 NCCANAGA 674
C AGA
Sbjct: 181 KECTLAGA 188
Score = 52.8 bits (121), Expect = 7e-06
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = +2
Query: 116 ALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
A I PS+ AD+ ++ E+ Q L N D LH+D+MDG FVPN+ FG
Sbjct: 2 AKIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFG 47
>UniRef50_Q8EW99 Cluster: D-ribulose-5-phosphate 3 epimerase; n=1;
Mycoplasma penetrans|Rep: D-ribulose-5-phosphate 3
epimerase - Mycoplasma penetrans
Length = 216
Score = 97.5 bits (232), Expect = 3e-19
Identities = 43/120 (35%), Positives = 74/120 (61%), Gaps = 3/120 (2%)
Frame = +3
Query: 309 HMMVEKPEQWITPMADAGVNQYTFHIEP--VKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
H+MVE ++ + V TFH E +++ I + +++H +K G+AIKP + + E
Sbjct: 69 HLMVENVAHYVDKLITKKVKYITFHCEAQTIEESISIINTIKKHNIKAGIAIKPNSSLKE 128
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRE-NYPLLDIEVDGGVGPSTINCC 659
E I ISD + +M+VEPGFGGQK++EN +++ +++ ++ L +E+DGG+ TI C
Sbjct: 129 YESLIKISDKITVMSVEPGFGGQKYIENSEIRIREIKKLSHKNLIVEIDGGINDQTILLC 188
Score = 33.5 bits (73), Expect = 4.8
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 146 DLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGH 256
D ++ E+ + L N +H D+MD +FVPN +F +
Sbjct: 16 DENKFKEQLESCLKNNIKDIHYDIMDNKFVPNTSFNN 52
>UniRef50_Q0LCN9 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep:
Ribulose-phosphate 3-epimerase - Herpetosiphon
aurantiacus ATCC 23779
Length = 227
Score = 97.5 bits (232), Expect = 3e-19
Identities = 51/128 (39%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+MV P+ + A AG N T H E + +++ E G GVA+ P TPVS
Sbjct: 72 DVHLMVSNPDALLEAYAKAGANHITVHQEASVHLHRTIQRIHELGCTAGVALNPATPVSS 131
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR----ENYPLLDIEVDGGVGPSTI 650
++ I D+VLIM+V PGFGGQ F+E +AK+ +R + + I+VDGGV PS I
Sbjct: 132 LDDIIEDLDLVLIMSVNPGFGGQSFIERSLAKIAAVRSLLDQRHHEAVIQVDGGVKPSNI 191
Query: 651 NCCANAGA 674
AGA
Sbjct: 192 ASVVQAGA 199
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +2
Query: 128 PSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
PSIL+A+ + L + Q + G ++ +DVMDG FVPNLTFG P
Sbjct: 15 PSILSANFANLGADVQAADEVGCSWIQVDVMDGHFVPNLTFGPP 58
>UniRef50_Q97NN7 Cluster: Ribulose-phosphate 3-epimerase; n=35;
Lactobacillales|Rep: Ribulose-phosphate 3-epimerase -
Streptococcus pneumoniae
Length = 218
Score = 96.7 bits (230), Expect = 5e-19
Identities = 52/129 (40%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Frame = +3
Query: 300 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVS 479
F+ H+MV PE + A AG + + H+E + +K+R G+K V I PGT V
Sbjct: 64 FDCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTSVE 123
Query: 480 EVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQ---YLRENYPL-LDIEVDGGVGPST 647
++ + + D VL+MTV PGFGGQ F+ M KV+ LRE L +IEVDGG+ T
Sbjct: 124 AIKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQT 183
Query: 648 INCCANAGA 674
I AGA
Sbjct: 184 IAQAKEAGA 192
Score = 50.0 bits (114), Expect = 5e-05
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
I PSIL AD + E ++L GA+Y H+D+MD FVP ++FG
Sbjct: 6 IAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFG 49
>UniRef50_Q30Y18 Cluster: Ribulose-phosphate 3-epimerase; n=2;
Desulfovibrionaceae|Rep: Ribulose-phosphate 3-epimerase
- Desulfovibrio desulfuricans (strain G20)
Length = 217
Score = 95.9 bits (228), Expect = 8e-19
Identities = 51/135 (37%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Frame = +3
Query: 282 KIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIK 461
K FF+ H+MV+ PE++I ADAG + H E + ++R G++ GVA+
Sbjct: 55 KASGLFFDVHLMVQAPERYIADFADAGADMLVVHAEATNHLERTLSEIRRMGVQCGVALN 114
Query: 462 PGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD----IEVDG 629
P TP+ +E + DMVLIM+V PGFGGQKF+ M K++ L I+VDG
Sbjct: 115 PHTPLCVLEYVLDQLDMVLIMSVNPGFGGQKFIPFTMRKIEELSAMITARGLKTLIQVDG 174
Query: 630 GVGPSTINCCANAGA 674
GV P GA
Sbjct: 175 GVDPENTPELVRRGA 189
Score = 52.8 bits (121), Expect = 7e-06
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
++ PS+L++D +L +E L D G ++H DVMDG FVPN+T G P
Sbjct: 2 ILSPSLLSSDYGRLADELAALEDAGLSWVHWDVMDGMFVPNITLGAP 48
>UniRef50_A3EQR0 Cluster: Pentose-5-phosphate-3-epimerase; n=1;
Leptospirillum sp. Group II UBA|Rep:
Pentose-5-phosphate-3-epimerase - Leptospirillum sp.
Group II UBA
Length = 231
Score = 95.5 bits (227), Expect = 1e-18
Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 5/129 (3%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
E H+MV P+ ++ + AGV++ H E + + ++R+ G GVA+ P +P +
Sbjct: 71 EAHLMVWHPDTYLEELKQAGVDRVIVHQESDVHLNRLLHQIRQMGFSPGVALNPSSPANL 130
Query: 483 VEKYISISDMVLIMTVEPGFGGQKF---MENQMAKVQYLRENYPLLD--IEVDGGVGPST 647
+E + + D+VL+MTV PGFGGQ F M ++AKV +REN L IEVDGG+ P+T
Sbjct: 131 LEDVLDLVDLVLVMTVNPGFGGQAFLSSMREKIAKVAKMRENRSGLSFRIEVDGGISPAT 190
Query: 648 INCCANAGA 674
+AGA
Sbjct: 191 AEEVVDAGA 199
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
LI PS+L D ++L EE +++ +GAD +HLDVMDG FVPNLTFG
Sbjct: 11 LIAPSLLAGDFARLGEEVKQISHSGADLIHLDVMDGDFVPNLTFG 55
>UniRef50_O67098 Cluster: Ribulose-phosphate 3-epimerase; n=3;
Bacteria|Rep: Ribulose-phosphate 3-epimerase - Aquifex
aeolicus
Length = 222
Score = 95.1 bits (226), Expect = 1e-18
Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+M+E P+++I +AG N + HIE + + ++E G K GV + PGT +S
Sbjct: 63 DAHLMIENPDKYIPKFVEAGANWISVHIENNYHIHRTLQLIKELGAKAGVVVNPGTSLSA 122
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLREN----YPLLDIEVDGGVGPSTI 650
+E+ + +D VL+M+V PGF GQKF+E + +++ L+E P IE+DGG+ + I
Sbjct: 123 IEEALYYADYVLLMSVNPGFSGQKFIERSIERLRILKEMRDRINPSCLIEIDGGIKENNI 182
Query: 651 NCCANAGA 674
AGA
Sbjct: 183 AEVVRAGA 190
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/58 (48%), Positives = 35/58 (60%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSEVPSRKNKR 292
L+ PSIL D + E+ Q + GAD LH DVMDG FVPN+T G+ E+ S KR
Sbjct: 3 LLAPSILAGDWWCIGEQIQATIRGGADILHYDVMDGHFVPNITAGY---EILSHIRKR 57
>UniRef50_Q8KBW2 Cluster: Ribulose-phosphate 3-epimerase; n=22;
Bacteria|Rep: Ribulose-phosphate 3-epimerase -
Chlorobium tepidum
Length = 220
Score = 94.7 bits (225), Expect = 2e-18
Identities = 49/128 (38%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+TH+M+ P+++I A AG +Q T H+E + + ++ G+K GV+I P TPVS
Sbjct: 67 DTHLMIVDPDKYIEDFAKAGSDQITVHLEACPHLHRTIQLIKSLGVKAGVSINPATPVSL 126
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYL----RENYPLLDIEVDGGVGPSTI 650
+E ++ D+VL+M+V PGFGGQKF+ + K+ L E P + I VDGGV
Sbjct: 127 LEPVLADLDLVLLMSVNPGFGGQKFIPGAIKKIMQLDAMRMEMNPEMVIAVDGGVTEENA 186
Query: 651 NCCANAGA 674
+AGA
Sbjct: 187 AMIVDAGA 194
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
L+ PSIL+AD + L + GAD++H DVMDG FVPN+TFG
Sbjct: 7 LLAPSILSADFTNLKASVELAEKAGADWMHCDVMDGIFVPNITFG 51
>UniRef50_A4ECC8 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 223
Score = 94.7 bits (225), Expect = 2e-18
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Frame = +3
Query: 291 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGT 470
D + H+MV P++ + ADAG + T H E + +++ G+K GV + P T
Sbjct: 59 DVPVDAHLMVSNPDETVDWYADAGADMITVHYEASTHLHRTLTHLQQRGVKAGVVLNPAT 118
Query: 471 PVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR---ENYPLLD-IEVDGGVG 638
PV +E I + DMVL+M+V PGFGGQ F+ +AK+Q L+ E + + IEVDGG+
Sbjct: 119 PVCVLESIIDVVDMVLLMSVNPGFGGQSFIPGTIAKLQELKAMCERHGVSPLIEVDGGIS 178
Query: 639 PSTINCCANAGA 674
I AGA
Sbjct: 179 SKNIAEVVKAGA 190
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
I PS+L+AD++ L E K+ GADY+H DVMDG F NLTFG
Sbjct: 6 IAPSVLSADMANLKGELDKIA--GADYVHFDVMDGHFTGNLTFG 47
>UniRef50_Q5P9J8 Cluster: Ribulose-phosphate 3-epimerase; n=9;
Rickettsiales|Rep: Ribulose-phosphate 3-epimerase -
Anaplasma marginale (strain St. Maries)
Length = 260
Score = 94.3 bits (224), Expect = 2e-18
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+MV+ P + + DAG + T H E + R+V+ HG KVGV++ P T S
Sbjct: 108 DVHLMVQTPALHLRSVIDAGADIITVHAESDVHLYRFVREVKSHGKKVGVSLVPKTHHSA 167
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR---ENYPL-LDIEVDGGVGPSTI 650
+E I D+VL+M+V+PGF GQ+F+ +Q+ K++ +R E Y L I VDGGV +
Sbjct: 168 LEYVIHELDLVLVMSVDPGFAGQEFLTSQLRKIEKIRTMVEKYSLPTKISVDGGVTTENV 227
Query: 651 NCCANAGA 674
NAGA
Sbjct: 228 GSIVNAGA 235
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
++ SIL+AD + L + G D+LH+DVMDG FVPNLT G
Sbjct: 48 VVSASILSADFANLSASVAAVEAAGVDWLHVDVMDGCFVPNLTVG 92
>UniRef50_Q5L0R7 Cluster: Ribulose-phosphate 3-epimerase; n=8;
Bacteria|Rep: Ribulose-phosphate 3-epimerase -
Geobacillus kaustophilus
Length = 220
Score = 93.9 bits (223), Expect = 3e-18
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+M+ P+++I A AG + + H+E + ++E G+K GV + P TPV
Sbjct: 65 DVHLMIADPDRYIPAFAKAGADVISVHVEACVHLHRTIHFIKEQGVKAGVVLNPHTPVEM 124
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYL----RENYPLLDIEVDGGVGPSTI 650
+ I D+VL+MTV PGFGGQ F+ + K++ + E +DIEVDGG+ T
Sbjct: 125 IRHVIGDVDLVLLMTVNPGFGGQAFIPAVVPKIREVARMASEQNKEVDIEVDGGINAETA 184
Query: 651 NCCANAGA 674
C AGA
Sbjct: 185 PLCVEAGA 192
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/46 (58%), Positives = 37/46 (80%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
I PSIL+AD ++L EE + + + GAD++H+D+MDG FVPNLTFG P
Sbjct: 6 IAPSILSADFARLAEEIRSVEEGGADWIHVDIMDGHFVPNLTFGPP 51
>UniRef50_O34557 Cluster: Ribulose-phosphate 3-epimerase; n=28;
Bacteria|Rep: Ribulose-phosphate 3-epimerase - Bacillus
subtilis
Length = 217
Score = 93.9 bits (223), Expect = 3e-18
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Frame = +3
Query: 285 IKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKP 464
+ D + H+M+E+P+++I A AG + + H E + + ++E G+K GV + P
Sbjct: 57 VTDLPLDVHLMIEEPDRYIPAFAKAGADILSVHAEACPHLHRTIQLIKEQGVKAGVVLNP 116
Query: 465 GTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR-----ENYPLLDIEVDG 629
TPV +E D+VL+MTV PGFGGQKF+ + + K++ ++ + L IEVDG
Sbjct: 117 HTPVQVIEHVFDDLDLVLLMTVNPGFGGQKFIHSVLPKIKEVKRMADEKGKKDLLIEVDG 176
Query: 630 GVGPSTINCCANAGA 674
GV T AGA
Sbjct: 177 GVNKETAPLVIEAGA 191
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
+ PSIL+AD + L E + + GAD +H+DVMDG FVPN+T G
Sbjct: 4 VAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHFVPNITIG 47
>UniRef50_Q1IVM1 Cluster: Ribulose-phosphate 3-epimerase; n=6;
Bacteria|Rep: Ribulose-phosphate 3-epimerase -
Acidobacteria bacterium (strain Ellin345)
Length = 224
Score = 92.7 bits (220), Expect = 7e-18
Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Frame = +3
Query: 267 KCLRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKV 446
K LR +K A + H+M+E P+ +I ADAG N + H E + +R+HG +
Sbjct: 52 KSLRKAVK-APIDCHLMIENPDAYIPAFADAGANWISVHQEACLHLDRTLHLIRDHGCRA 110
Query: 447 GVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYL----RENYPLLD 614
GV I P TPV + + + I D VL+M+V PGFG Q F+ + KV+ L +
Sbjct: 111 GVVINPATPVETLSEVLDIVDYVLVMSVNPGFGAQPFIPATLHKVRKLVALRNQGGTNFR 170
Query: 615 IEVDGGVGPSTINCCANAG 671
IE+DGG+ TI AG
Sbjct: 171 IEIDGGMALDTIGEAIRAG 189
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
+ PSIL+AD ++L E+ + + G +H DVMDG FVPN+T G P
Sbjct: 4 LAPSILSADFARLAEQVEAAIQGGGTVVHFDVMDGHFVPNITIGPP 49
>UniRef50_Q7QYY2 Cluster: GLP_164_20691_19966; n=2; Eukaryota|Rep:
GLP_164_20691_19966 - Giardia lamblia ATCC 50803
Length = 241
Score = 92.7 bits (220), Expect = 7e-18
Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 22/155 (14%)
Frame = +3
Query: 273 LRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIE--------------PVKDVIE 410
L + +AF + H M P WI+ A AG + +TFHIE P +D+
Sbjct: 54 LHAAVPNAFLDCHFMTNDPGFWISSTAKAGASTFTFHIEAPSVRSGRNSPYIDPDEDLEA 113
Query: 411 V---CRK----VREHGMKVGVAIKPGTPVSEV-EKYISISDMVLIMTVEPGFGGQKFMEN 566
+ C + ++ HG+K G++IKP TP S + + + D+VL+MTVEPGFGGQK++
Sbjct: 114 INTACARLVEEIKAHGLKAGLSIKPKTPASVIGDDLLKALDLVLLMTVEPGFGGQKYIPE 173
Query: 567 QMAKVQYLRENYPLLDIEVDGGVGPSTINCCANAG 671
K L++ L IEVDGG+ +TI+ + G
Sbjct: 174 AAEKAIQLKKRRSDLLIEVDGGISDATIDHACSCG 208
Score = 69.3 bits (162), Expect = 8e-11
Identities = 31/47 (65%), Positives = 40/47 (85%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
LI PSIL+AD S+L +E+Q++L+ GAD+LH+DVMDG FVPNLT G P
Sbjct: 3 LIAPSILSADFSKLGQEAQEVLNCGADWLHVDVMDGNFVPNLTIGPP 49
>UniRef50_UPI000050F74E Cluster: COG0036:
Pentose-5-phosphate-3-epimerase; n=1; Brevibacterium
linens BL2|Rep: COG0036: Pentose-5-phosphate-3-epimerase
- Brevibacterium linens BL2
Length = 220
Score = 91.9 bits (218), Expect = 1e-17
Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+M+ + ++ A+ G TFH E + + R++R+ G K +A+KP TP+
Sbjct: 62 DAHLMIAEADRHAPVYAELGCASVTFHAEAAAAPVRLAREIRKLGAKASLALKPATPIEP 121
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPL----LDIEVDGGVGPSTI 650
+ D +LIMTVEPGFGGQKF++ + K++ RE + ++VDGGV ST+
Sbjct: 122 FIDLLGEFDQILIMTVEPGFGGQKFLDVCLPKIRRTREAISASGLEIKLQVDGGVSTSTV 181
Query: 651 NCCANAGA 674
+AGA
Sbjct: 182 ERVVDAGA 189
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/49 (55%), Positives = 32/49 (65%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSE 268
I PSIL++D S L E K+ + AD H+DVMD FVPNLTFG P E
Sbjct: 5 INPSILSSDFSDLRGELAKI--STADMAHIDVMDNHFVPNLTFGPPVVE 51
>UniRef50_A6LQV5 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Clostridium beijerinckii NCIMB 8052|Rep:
Ribulose-phosphate 3-epimerase - Clostridium
beijerinckii NCIMB 8052
Length = 219
Score = 91.9 bits (218), Expect = 1e-17
Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Frame = +3
Query: 291 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGT 470
D + H+MV PE +I + +AG N T H E + + ++ G+KVGVA+ P T
Sbjct: 61 DIELDVHLMVTNPEIFIDALVEAGANTITIHQESSPHIYNLMYIIKSFGIKVGVALNPAT 120
Query: 471 PVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKV----QYLRENYPLLDIEVDGGVG 638
P++ ++ + + +LIMTVEPGFGGQ F+E M K+ +++ +++VDGG+
Sbjct: 121 PINTLKHISHMVNKILIMTVEPGFGGQSFIEPMMEKINEVSNFIKSENIECELQVDGGIN 180
Query: 639 PSTINCCANAGA 674
I GA
Sbjct: 181 LENIGKVVENGA 192
Score = 49.6 bits (113), Expect = 7e-05
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +2
Query: 110 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
++ + PSIL A+ +L E KL G LH+D+MDG FVPN+ FG
Sbjct: 1 MEVKLSPSILGANFLKLEETIVKLKKQGIKELHIDIMDGHFVPNIAFG 48
>UniRef50_Q6L0S2 Cluster: Ribulose-phosphate 3-epimerase; n=4;
Thermoplasmatales|Rep: Ribulose-phosphate 3-epimerase -
Picrophilus torridus
Length = 214
Score = 91.9 bits (218), Expect = 1e-17
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+M+E+P+++ DAG + H E + +E+ +K ++ G+ I P T
Sbjct: 63 DAHLMIERPDKYYKSFLDAGADVLLIHYESPVNTMELLKKFHRENIRYGIVINPETNFER 122
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKV----QYLRENYPLLDIEVDGGVGPSTI 650
V+ I ++++LIM+V PGF GQKF+++ + KV +++R N IE+DGG+ T
Sbjct: 123 VKPLIENAEILLIMSVNPGFSGQKFIDDSLIKVSQAKEFIRANNLKTRIEIDGGINDETG 182
Query: 651 NCCANAGA 674
ANAGA
Sbjct: 183 RLAANAGA 190
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
+ PSI+++DLS LY+E ++ D GA HLDVMDG FV N+T G
Sbjct: 4 VSPSIISSDLSHLYDEIKRCEDAGAGSFHLDVMDGHFVNNITMG 47
>UniRef50_Q5FJI0 Cluster: Ribulose-phosphate 3-epimerase; n=5;
Lactobacillus|Rep: Ribulose-phosphate 3-epimerase -
Lactobacillus acidophilus
Length = 216
Score = 91.5 bits (217), Expect = 2e-17
Identities = 48/127 (37%), Positives = 74/127 (58%), Gaps = 3/127 (2%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPV-KDVIEVCRK-VREHGMKVGVAIKPGTPV 476
E H+M + P+ + +AG + H E + +D ++ + +G+ G+A+ P TP
Sbjct: 63 EIHLMSDSPDDLVPAFVNAGADLIELHYEAMDEDKLDYWLDYLISNGVNTGLALNPDTPS 122
Query: 477 SEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENY-PLLDIEVDGGVGPSTIN 653
V KY+S + VL+MTV PGFGGQ+F+ N K++ +RE P +DIEVDGG+ TI
Sbjct: 123 DVVTKYVSKLNQVLVMTVYPGFGGQEFIANSAQKIKEVRELVGPDIDIEVDGGINNQTIK 182
Query: 654 CCANAGA 674
+AGA
Sbjct: 183 IAKDAGA 189
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
+I PSILNAD L + ++ + G + H+D+MDG FVPNL+FG
Sbjct: 2 IIAPSILNADNLNLETDIKEAIAAGINRFHIDIMDGHFVPNLSFG 46
>UniRef50_A4M924 Cluster: Ribulose-phosphate 3-epimerase; n=2;
Bacteria|Rep: Ribulose-phosphate 3-epimerase - Petrotoga
mobilis SJ95
Length = 219
Score = 91.1 bits (216), Expect = 2e-17
Identities = 50/137 (36%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Frame = +3
Query: 273 LRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGV 452
+R K KD + + H+M+ +P++++ + + VN T H E V + K++E G + GV
Sbjct: 53 IRKKFKDIYLDAHLMIVEPDKYLENFSKS-VNSITVHYEAVTHLHRTVLKIKELGCEAGV 111
Query: 453 AIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR----ENYPLLDIE 620
+ P TPVS +E+ + D VLIM+V PGF GQ F+E KV+ LR E ++I
Sbjct: 112 TLNPHTPVSLLEEILPYVDKVLIMSVNPGFTGQHFIETTYEKVRKLRRLSDEKGLNVEIM 171
Query: 621 VDGGVGPSTINCCANAG 671
VDGGV I +G
Sbjct: 172 VDGGVNKQNIGLLHQSG 188
Score = 55.2 bits (127), Expect = 1e-06
Identities = 29/56 (51%), Positives = 36/56 (64%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSEVPSRKNK 289
I PSIL AD L +E +K+ AD +HLD+MDG FVPN+TFG P E +K K
Sbjct: 4 IYPSILAADFLNLAQEVEKV-SKDADGIHLDIMDGVFVPNITFGFPIVESIRKKFK 58
>UniRef50_Q43157 Cluster: Ribulose-phosphate 3-epimerase,
chloroplast precursor; n=77; cellular organisms|Rep:
Ribulose-phosphate 3-epimerase, chloroplast precursor -
Spinacia oleracea (Spinach)
Length = 285
Score = 91.1 bits (216), Expect = 2e-17
Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 6/136 (4%)
Frame = +3
Query: 285 IKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVI--EVCRKVREHGMKVGVAI 458
+ D + H+M+ +PEQ + AG + + H E + +++ G K GV +
Sbjct: 117 VTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLGAKAGVVL 176
Query: 459 KPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR----ENYPLLDIEVD 626
PGTP+S +E + + D+VLIM+V PGFGGQ F+E+Q+ K+ LR E IEVD
Sbjct: 177 NPGTPLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCVEKGVNPWIEVD 236
Query: 627 GGVGPSTINCCANAGA 674
GGV P+ AGA
Sbjct: 237 GGVTPANAYKVIEAGA 252
Score = 52.8 bits (121), Expect = 7e-06
Identities = 27/74 (36%), Positives = 44/74 (59%)
Frame = +2
Query: 32 SRTFGNSKX*NSSVXKIXSKTKMTRHLKALIGPSILNADLSQLYEESQKLLDNGADYLHL 211
S TF K ++ K S+ ++ PSIL+A+ ++L E+ + + G D++H+
Sbjct: 36 SLTFTRRKV--QTLVKATSRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHV 93
Query: 212 DVMDGQFVPNLTFG 253
DVMDG+FVPN+T G
Sbjct: 94 DVMDGRFVPNITIG 107
>UniRef50_O84123 Cluster: Ribulose-phosphate 3-epimerase; n=13;
Chlamydiaceae|Rep: Ribulose-phosphate 3-epimerase -
Chlamydia trachomatis
Length = 233
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/134 (30%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Frame = +3
Query: 291 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGT 470
+ F E H M+ P +++ AG ++ H E +++ E+ +++ G++ GVA P T
Sbjct: 68 ELFLEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENIKEIISYIQKCGVQAGVAFSPET 127
Query: 471 PVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD------IEVDGG 632
+ V +I + D++L+M+V PGF GQKF+ + + ++Q++++ +L IEVDGG
Sbjct: 128 SIEFVTSFIPLCDVILLMSVHPGFCGQKFIPDTIERIQFVKQAIQVLGREGSCLIEVDGG 187
Query: 633 VGPSTINCCANAGA 674
+ + C AGA
Sbjct: 188 IDKESARACREAGA 201
Score = 60.5 bits (140), Expect = 4e-08
Identities = 24/45 (53%), Positives = 36/45 (80%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
L+ PSI+ ADL+ + E++ + ++GAD +H+DVMDG FVPN+TFG
Sbjct: 12 LVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFG 56
>UniRef50_O66107 Cluster: Ribulose-phosphate 3-epimerase; n=2;
Treponema|Rep: Ribulose-phosphate 3-epimerase -
Treponema pallidum
Length = 218
Score = 90.6 bits (215), Expect = 3e-17
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Frame = +3
Query: 267 KCLRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKV 446
+CLR K F + H+MV +P I AG + TFHIE + +R G+KV
Sbjct: 55 RCLRSKTHLPF-DVHLMVSRPADLIEDFVQAGADFLTFHIEAEVHAHRLIHAIRGRGVKV 113
Query: 447 GVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYL-----RENYPLL 611
G+++ P TPV+ + + + D+VL+MTV PGF GQ+ + + ++KV L Y +
Sbjct: 114 GISLVPSTPVAALSEVLPFVDLVLVMTVNPGFSGQQMIAHCLSKVSALVQMRTERGYSYM 173
Query: 612 DIEVDGGVGPSTINCCANAGA 674
I VDGG+ T+ +AGA
Sbjct: 174 -ISVDGGIDCRTLPQALDAGA 193
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
+ PS+L+AD S L L +GA ++HLDVMDG FVPNLTFG P
Sbjct: 7 LAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHFVPNLTFGAP 52
>UniRef50_A6T960 Cluster: Putative ribulose-phosphate 3-epimerase;
n=1; Klebsiella pneumoniae subsp. pneumoniae MGH
78578|Rep: Putative ribulose-phosphate 3-epimerase -
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Length = 218
Score = 89.4 bits (212), Expect = 7e-17
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPV-KDVIEVCRKVREHGMKVGVAIKPGTPVS 479
+ H+MVE P +I + DAG + ++ H E + ++ V +R+ G +VG+ + P TPV
Sbjct: 52 DVHLMVEAPASFIPALLDAGADAFSLHPETICREAFRVINMLRQAGKEVGMVLNPATPVE 111
Query: 480 EVEKYISISDMVLIMTVEPGFGGQKFMENQMAKV---QYLRENYPL-LDIEVDGGVGPST 647
++ Y+ + D V +MTV+PG+ GQ F+ +AK+ L+E L +EVDG +T
Sbjct: 112 SIQHYLHLLDKVTVMTVDPGYAGQPFIPEMLAKITQLHQLKETGSLRFLLEVDGSCNRNT 171
Query: 648 INCCANAGA 674
AGA
Sbjct: 172 YRALLGAGA 180
Score = 33.5 bits (73), Expect = 4.8
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +2
Query: 146 DLSQLYEESQKLLDNGADYLHLDVMDGQFVPNL 244
D+ +L E+ + L++ AD LH+D+MDG +V NL
Sbjct: 2 DMMKLTEQL-RFLNSKADRLHVDIMDGHYVKNL 33
>UniRef50_Q8A0S5 Cluster: Ribulose-phosphate 3-epimerase; n=5;
Bacteroidetes|Rep: Ribulose-phosphate 3-epimerase -
Bacteroides thetaiotaomicron
Length = 216
Score = 88.2 bits (209), Expect = 2e-16
Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Frame = +3
Query: 282 KIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIK 461
K+ D + H+M+ PE++I + G + H E + V ++++E GM+ V I
Sbjct: 57 KLTDKPLDVHLMIVNPEKFIPEVKALGAHTMNVHYEACTHLHRVIQQIKEAGMQPAVTIN 116
Query: 462 PGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD----IEVDG 629
P TPV+ ++ I MVLIM+V PGFGGQKF+E+ + KV+ LR IEVDG
Sbjct: 117 PATPVALLQDIIQDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRALIERAGSKALIEVDG 176
Query: 630 GVGPSTINCCANAGA 674
GV T AGA
Sbjct: 177 GVNLETGARLVEAGA 191
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/50 (44%), Positives = 36/50 (72%)
Frame = +2
Query: 110 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
+K +I PSIL+AD L + + + + A+++H+D+MDG FVPN++FG P
Sbjct: 1 MKPIISPSILSADFGYLARDIEMINRSEAEWVHIDIMDGVFVPNISFGFP 50
>UniRef50_A5IY03 Cluster: Ribulose-phosphate 3-epimerase; n=2;
Mycoplasma|Rep: Ribulose-phosphate 3-epimerase -
Mycoplasma agalactiae
Length = 220
Score = 87.0 bits (206), Expect = 4e-16
Identities = 51/132 (38%), Positives = 78/132 (59%), Gaps = 6/132 (4%)
Frame = +3
Query: 297 FFETHMMVEKPEQWITPMADAGVNQYTFHIEPVK-DVIEVCRKVREHGMKVGVAIKPGTP 473
F + H+MVE P +I D V+ TFH E V+ + + K + H ++G+AIKP T
Sbjct: 66 FKDAHLMVENPLDYIDLYKDV-VDIVTFHYEAVESEKLLKFLKQKHHDYRLGIAIKPSTE 124
Query: 474 VSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRE-----NYPLLDIEVDGGVG 638
V E++K++ +VL+M+VEPG GGQKF+ + + K++ L++ Y L I+VDGG+
Sbjct: 125 VEEIKKFLPYIQLVLVMSVEPGKGGQKFIPSAIDKIKLLKQLRIKHAYDYL-IQVDGGIN 183
Query: 639 PSTINCCANAGA 674
T C AGA
Sbjct: 184 DVTGPECFKAGA 195
Score = 41.1 bits (92), Expect = 0.024
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNL 244
+ PS+LN + + L++ G ++H DVMDG+FVPNL
Sbjct: 8 VTPSLLNVEPENRLNMANILVNEGIKWIHYDVMDGKFVPNL 48
>UniRef50_P32719 Cluster: D-allulose-6-phosphate 3-epimerase; n=15;
Bacteria|Rep: D-allulose-6-phosphate 3-epimerase -
Escherichia coli (strain K12)
Length = 231
Score = 87.0 bits (206), Expect = 4e-16
Identities = 47/129 (36%), Positives = 74/129 (57%), Gaps = 5/129 (3%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVK-DVIEVCRKVREHGMKVGVAIKPGTPVS 479
+ H+MV +P+ +I +A AG + T H E + + ++R H MKVG+ + P TPV
Sbjct: 61 DCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVE 120
Query: 480 EVEKYISISDMVLIMTVEPGFGGQKF---MENQMAKVQYLRENYPL-LDIEVDGGVGPST 647
++ YI +D + +MTV+PGF GQ F M +++A+++ RE L +IEVDG +T
Sbjct: 121 AMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQAT 180
Query: 648 INCCANAGA 674
AGA
Sbjct: 181 YEKLMAAGA 189
Score = 49.2 bits (112), Expect = 9e-05
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLT 247
I PS++ DL + ++E + +D+ ADY H+D+MDG FVPNLT
Sbjct: 3 ISPSLMCMDLLK-FKEQIEFIDSHADYFHIDIMDGHFVPNLT 43
>UniRef50_Q746Z3 Cluster: Ribulose-phosphate 3-epimerase; n=13;
Bacteria|Rep: Ribulose-phosphate 3-epimerase - Geobacter
sulfurreducens
Length = 221
Score = 86.2 bits (204), Expect = 6e-16
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Frame = +3
Query: 282 KIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIK 461
++ + + H+M+E P+++I A AG + H E + + ++ G K GV++
Sbjct: 56 RVTELPLDVHLMIEHPDRYIPDFAAAGSDIIVVHAEASTHLHRTIQLIKSLGKKAGVSLN 115
Query: 462 PGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPL----LDIEVDG 629
P TP++ ++ + D+VL+MTV PGFGGQ F+E + K+Q LR ++EVDG
Sbjct: 116 PATPLNCLDYVLEDLDLVLLMTVNPGFGGQSFIEACIPKIQSLRAMLDRRGCEAELEVDG 175
Query: 630 GVGPSTINCCANAGA 674
GV I A+AGA
Sbjct: 176 GVKIDNIARIAHAGA 190
Score = 59.7 bits (138), Expect = 6e-08
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
I PSIL+AD S+L +E + + GADY+H+DVMDG FVPN+T G
Sbjct: 4 IAPSILSADFSRLGDEVRAVAAAGADYIHVDVMDGHFVPNITIG 47
>UniRef50_A5FUG9 Cluster: Ribulose-phosphate 3-epimerase; n=2;
Bacteria|Rep: Ribulose-phosphate 3-epimerase -
Acidiphilium cryptum (strain JF-5)
Length = 223
Score = 86.2 bits (204), Expect = 6e-16
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Frame = +3
Query: 300 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVS 479
F+ H+M+ + ++ A AG + T H E + + +R G+K GVAI P TP
Sbjct: 69 FDVHLMIAPADPYLADFAKAGADHITVHAEAGPHLHRSLQTIRALGLKAGVAINPATPAE 128
Query: 480 EVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR----ENYPLLDIEVDGGVGPST 647
V + + D+V +MTV PGFGGQ F+ Q+ K+ LR E + IE DGG+ ++
Sbjct: 129 AVRHVLDLVDIVNVMTVNPGFGGQSFLAGQLPKIAELRRMVTEAGRDIRIETDGGIDAAS 188
Query: 648 INCCANAGA 674
AGA
Sbjct: 189 APRALEAGA 197
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
+I PS+L AD +L EE + GA +LHLDVMDG FVPN++FG
Sbjct: 10 IIAPSLLAADFGRLREEVAAVERAGAHWLHLDVMDGHFVPNISFG 54
>UniRef50_A6D9N1 Cluster: Pentose-5-phosphate-3-epimerase; n=2;
Gammaproteobacteria|Rep: Pentose-5-phosphate-3-epimerase
- Vibrio shilonii AK1
Length = 225
Score = 85.8 bits (203), Expect = 8e-16
Identities = 40/125 (32%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Frame = +3
Query: 291 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGT 470
D ++ H+M+ P+Q+I AD G + H E + ++ G+K G+AI PGT
Sbjct: 59 DIEYDVHLMLSNPDQYIDMFADLGASLMYVHAEAPPHLHRTLGNIQAKGIKSGLAINPGT 118
Query: 471 PVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRE--NYPLLD--IEVDGGVG 638
P+S +E + ++D++L+M+V PGF GQKF+ N ++ + + N D + +DG +
Sbjct: 119 PLSVIEDVLDVTDVILVMSVNPGFAGQKFIANAFNRIDRIIDMINKQGTDTKLAIDGAIS 178
Query: 639 PSTIN 653
P I+
Sbjct: 179 PEVID 183
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +2
Query: 128 PSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
PS++ D S+L +E +L D LH+DVMDG FVPN G
Sbjct: 6 PSMMCVDFSKLPQELAELEKAKVDMLHIDVMDGHFVPNFALG 47
>UniRef50_A6LN69 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Thermosipho melanesiensis BI429|Rep: Ribulose-phosphate
3-epimerase - Thermosipho melanesiensis BI429
Length = 214
Score = 85.0 bits (201), Expect = 1e-15
Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+MV PE I + D + + T HIE + K++E+ ++ V + PGTP+
Sbjct: 62 DVHLMVTNPEFHIEKLLDYDIQRITVHIESTHHIHRAITKIKENNIEAFVTLNPGTPLVF 121
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYL---RENYPL-LDIEVDGGVGPSTI 650
+E+ I D VL+M+V PGF GQKF+ + K++ L ++ + + I VDGGV S
Sbjct: 122 IEEVIPYIDGVLVMSVNPGFSGQKFIAKSIEKIKTLNNWKQKHGMNYSIAVDGGVNDSNA 181
Query: 651 NCCANAGA 674
+ +AGA
Sbjct: 182 DVIISAGA 189
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +2
Query: 131 SILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
SIL A+L L EE +++ +N D +H+DVMDG FVPNLTFG P
Sbjct: 7 SILAANLLNLKEELKRV-ENLIDEIHIDVMDGHFVPNLTFGFP 48
>UniRef50_P51013 Cluster: Ribulose-phosphate 3-epimerase; n=4;
Proteobacteria|Rep: Ribulose-phosphate 3-epimerase -
Rhodospirillum rubrum
Length = 225
Score = 84.6 bits (200), Expect = 2e-15
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+M + I A+AG + TFH E V + +R+ G+K GVA+ P +P+S
Sbjct: 66 DVHLMTRPVDPLIDSFAEAGADMITFHPEASDHVHRSVQMIRKRGLKAGVALNPASPLSL 125
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR--ENYPLLDIEVDGGVGPSTINC 656
++ + D+VLIM+V PGFGGQ F+ + + K+ L VDGGV P+
Sbjct: 126 LDHILEDLDLVLIMSVNPGFGGQSFIPSALPKIAALANGRRRACRGDRVDGGVNPADARA 185
Query: 657 CANAGA 674
A GA
Sbjct: 186 LARPGA 191
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +2
Query: 98 MTRHLKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
MTR ++ I PS+L+AD + GAD LH DVMD +VPNLT G
Sbjct: 1 MTRAIR--IAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVG 50
>UniRef50_Q4FNU8 Cluster: Ribulose-phosphate 3-epimerase; n=5;
Bacteria|Rep: Ribulose-phosphate 3-epimerase -
Pelagibacter ubique
Length = 219
Score = 84.2 bits (199), Expect = 3e-15
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Frame = +3
Query: 300 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVS 479
F+ H+M+ ++I ADAG + T H E +++ ++ G KVGV++ P + ++
Sbjct: 64 FDVHLMISPVHKYIKDYADAGADIITIHPEATENLAVSIDHIKSLGKKVGVSLNPESKIN 123
Query: 480 EVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYL---RENYPL-LDIEVDGGVGPST 647
+ ++ D+VLIM+V PGFGGQKFM + K++ L R+ + DIE+DGG+
Sbjct: 124 LITDLLNQIDLVLIMSVNPGFGGQKFMPEVLEKIKELKKIRDQKNIDFDIEIDGGINFDN 183
Query: 648 INCCANAGA 674
AGA
Sbjct: 184 NKLAIEAGA 192
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = +2
Query: 113 KALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHP 259
K I PSIL+AD SQL E ++L + GAD +H+DVMDG FVPNLT G P
Sbjct: 3 KIQISPSILSADFSQLRNEIKRLEEGGADMIHVDVMDGHFVPNLTMGPP 51
>UniRef50_Q97PJ6 Cluster: Ribulose-phosphate 3-epimerase family
protein; n=3; Streptococcus pneumoniae|Rep:
Ribulose-phosphate 3-epimerase family protein -
Streptococcus pneumoniae
Length = 231
Score = 83.8 bits (198), Expect = 3e-15
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = +3
Query: 282 KIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDV-IEVCRKVREHGMKVGVAI 458
KI D H+MV P W+ + D H E + + + K+ + G+K GV +
Sbjct: 57 KISDTPLSVHLMVTDPTFWVDQVLDLQCEYICIHAEVLNGLAFRLIDKIHDAGLKAGVVL 116
Query: 459 KPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRE 596
P TPVS + YI + D IMTV+PGF GQ+F+E+ + K+Q LR+
Sbjct: 117 NPETPVSTIFPYIDLLDKATIMTVDPGFAGQRFLESTLYKIQELRQ 162
Score = 41.9 bits (94), Expect = 0.014
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 128 PSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLT 247
PS++ DL + E+ L D A Y H+D+MDG FVPN+T
Sbjct: 8 PSLMTMDLDKFKEQITFLNDKVASY-HIDIMDGHFVPNIT 46
>UniRef50_Q04539 Cluster: Ribulose-phosphate 3-epimerase, plasmid;
n=11; cellular organisms|Rep: Ribulose-phosphate
3-epimerase, plasmid - Ralstonia eutropha (strain ATCC
17699 / H16 / DSM 428 / Stanier 337)(Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier337))
Length = 241
Score = 83.8 bits (198), Expect = 3e-15
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 8/132 (6%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+MVE + I A AG N +FH E + V +R+HG K G+ + P TP+S
Sbjct: 77 DVHLMVEPVDALIPMFAKAGANLISFHPEASRHVDRTIGLIRDHGCKAGLVLNPATPLSW 136
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPL--------LDIEVDGGVG 638
++ + D+VL+M+V PGFGGQ F+ + KV+ R + +E+DGGV
Sbjct: 137 LDHTLDKLDLVLLMSVNPGFGGQAFIPGVLDKVRQARARIDRQVAAGGRPVWLEIDGGVK 196
Query: 639 PSTINCCANAGA 674
I A AGA
Sbjct: 197 ADNITEIARAGA 208
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
+ PSIL+AD ++L EE + GAD +H DVMD +V NLT G
Sbjct: 18 LAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVSNLTIG 61
>UniRef50_P74061 Cluster: Ribulose-phosphate 3-epimerase; n=102;
cellular organisms|Rep: Ribulose-phosphate 3-epimerase -
Synechocystis sp. (strain PCC 6803)
Length = 230
Score = 83.0 bits (196), Expect = 6e-15
Identities = 45/130 (34%), Positives = 74/130 (56%), Gaps = 6/130 (4%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIE--PVKDVIEVCRKVREHGMKVGVAIKPGTPV 476
+ H+M+ +PE+++ A AG + + H+E + ++RE G K G + P TP+
Sbjct: 66 DVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPL 125
Query: 477 SEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRE--NYPLLD--IEVDGGVGPS 644
+E + + D++LIM+V PGFGGQ F+ + K++ LR+ + LD IEVDGG+ P+
Sbjct: 126 DFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPN 185
Query: 645 TINCCANAGA 674
AGA
Sbjct: 186 NTWQVLEAGA 195
Score = 59.7 bits (138), Expect = 6e-08
Identities = 25/45 (55%), Positives = 37/45 (82%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
++ PSIL+AD S+L EE + + + GAD++H+DVMDG+FVPN+T G
Sbjct: 6 VVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIG 50
>UniRef50_P0AG10 Cluster: Ribulose-phosphate 3-epimerase; n=293;
cellular organisms|Rep: Ribulose-phosphate 3-epimerase -
Shigella flexneri
Length = 225
Score = 83.0 bits (196), Expect = 6e-15
Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Frame = +3
Query: 267 KCLRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKV 446
K LR A + H+MV+ ++ + A AG + TFH E + V + ++E+G K
Sbjct: 54 KSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKA 113
Query: 447 GVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR----ENYPLLD 614
G+ P TP+S ++ + D++L+M+V PGFGGQ F+ + K++ +R E+ +
Sbjct: 114 GLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIR 173
Query: 615 IEVDGGVGPSTINCCANAGA 674
+EVDGGV + I A AGA
Sbjct: 174 LEVDGGVKVNNIGEIAAAGA 193
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
LI PSIL+AD ++L E++ K L GAD +H DVMD +VPNLT G
Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIG 49
>UniRef50_Q8Y907 Cluster: Lmo0735 protein; n=10; Firmicutes|Rep:
Lmo0735 protein - Listeria monocytogenes
Length = 223
Score = 82.6 bits (195), Expect = 8e-15
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+M+ P ++ AD G + H E K+R G KVG+AI PGT ++
Sbjct: 65 DVHLMIMNPGDYVEMFADKGADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIAT 124
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMEN---QMAKVQYLRENYPLLDIEVDGGVGPSTIN 653
+++ + + D V++MTV PGF GQK+++ ++A++ L+++Y +I VDG + P I+
Sbjct: 125 IKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVELKKDY-TFEIMVDGAISPEKIS 183
Query: 654 CCANAG 671
+ G
Sbjct: 184 KLSQLG 189
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +2
Query: 113 KALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSEVPSRKNKR 292
K LI PS++ AD S L E ++L G+D H+D+MDG FVP+ G E +K ++
Sbjct: 3 KKLICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQK 62
>UniRef50_A5FRH0 Cluster: Ribulose-phosphate 3-epimerase; n=3;
Dehalococcoides|Rep: Ribulose-phosphate 3-epimerase -
Dehalococcoides sp. BAV1
Length = 220
Score = 82.2 bits (194), Expect = 1e-14
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Frame = +3
Query: 279 GKIKDAFF-ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVA 455
G+ K F E H+M PE+++T G + FH E V +++E G KVG+A
Sbjct: 53 GRYKPCFASEIHLMTLNPEEYLTYCKQHGARRVIFHFEATPRPEYVISRIKEMGFKVGLA 112
Query: 456 IKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGV 635
+ P T V+E + DMVL M+V PGF G F+ + KV+ + +P +I +DGG
Sbjct: 113 VNPETSVAEFAYLVPQVDMVLFMSVIPGFYGAPFIPEVLLKVKEFKRRFPETEIGLDGGA 172
Query: 636 GPSTINCCANAG 671
+ I AG
Sbjct: 173 KQANIPEIVAAG 184
>UniRef50_Q8Y416 Cluster: Lmo2661 protein; n=26; Firmicutes|Rep:
Lmo2661 protein - Listeria monocytogenes
Length = 224
Score = 81.0 bits (191), Expect = 2e-14
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+ P ++I +FH+E +DV E+ RK+R + +K +AI P TP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEIIRKIRSYNVKPSIAINPETPIEA 122
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRE------NYPLLDIEVDGGVGPS 644
+ Y+ +MVL+MTV PGF GQKF + + K+ L+ + PL IEVDG +
Sbjct: 123 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLAGKIHAPL--IEVDGNINKE 180
Query: 645 TI 650
T+
Sbjct: 181 TV 182
Score = 41.9 bits (94), Expect = 0.014
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSEV 271
I SI+ AD L +E Q+L G + LH DVMDG +V NL G E+
Sbjct: 4 IAASIMCADQLHLGDELQRLESAGVELLHCDVMDGVYVNNLALGPEYLEI 53
>UniRef50_Q07U53 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Rhodopseudomonas palustris BisA53|Rep:
Ribulose-phosphate 3-epimerase - Rhodopseudomonas
palustris (strain BisA53)
Length = 228
Score = 81.0 bits (191), Expect = 2e-14
Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Frame = +3
Query: 294 AFFETHMMVEKPEQWITPMADAGVNQYTFHIEPV-KDVIEVCRKVREHGMKVGVAIKPGT 470
A + H+MVE PE ++ + AG + TFH+E V + V + ++R+HG+ VG+A+ P T
Sbjct: 67 AKIDVHLMVENPEMYVDQLVLAGASSITFHVEAVPRSVNRLIARIRQHGVGVGLALCPST 126
Query: 471 PVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRE----NYPLLDIEVDGGV 635
+ ++ + D + I+ V+PGF GQ+ ++QY E ++ +D+ VDGGV
Sbjct: 127 SLQVLDDLLPKVDRITILGVDPGFVGQEISSGTTKRIQYASELRRVHHAHVDLCVDGGV 185
>UniRef50_Q58093 Cluster: Ribulose-phosphate 3-epimerase; n=6;
Methanococcales|Rep: Ribulose-phosphate 3-epimerase -
Methanococcus jannaschii
Length = 234
Score = 79.8 bits (188), Expect = 6e-14
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Frame = +3
Query: 282 KIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIK 461
K+ + E H+MVE + ++ + ++ TFHIE VK + +++ G K VA+
Sbjct: 56 KLTELPVEVHLMVENVDLFVNEFEE--MDYITFHIEAVKFPFRIINRIKSIGAKPIVALN 113
Query: 462 PGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR----ENYPLLDIEVDG 629
P TP+ +E + VL+MTVEPGF GQKF+ K++ L+ EN I VDG
Sbjct: 114 PATPLDAIEYILGDVYAVLVMTVEPGFSGQKFIPVMTKKIRKLKSMIVENGYDTKIFVDG 173
Query: 630 GVGPSTINCCANAGA 674
G+ T AGA
Sbjct: 174 GINVETAPLAVKAGA 188
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
IG SIL+AD L EE +K + G D+ H+D+MDG FVPN++ G
Sbjct: 4 IGASILSADFGHLREEIKKAEEAGVDFFHVDMMDGHFVPNISMG 47
>UniRef50_A6T9A4 Cluster: D-allulose-6-phosphate 3-epimerase; n=1;
Klebsiella pneumoniae subsp. pneumoniae MGH 78578|Rep:
D-allulose-6-phosphate 3-epimerase - Klebsiella
pneumoniae subsp. pneumoniae MGH 78578
Length = 215
Score = 78.6 bits (185), Expect = 1e-13
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Frame = +3
Query: 282 KIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKD-VIEVCRKVREHGMKVGVAI 458
KI + H+MV PE I +AG + +FH E + + + ++++ G K GV +
Sbjct: 45 KITTVPIDVHLMVNHPEDIIPMCLEAGADIISFHPETANNKIFRLLNQIKDAGKKCGVVL 104
Query: 459 KPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYL---REN--YPLLDIEV 623
P TP + +Y + D V +M+V+PG+ GQKF+ + K++ L R+N Y L E+
Sbjct: 105 NPATPAESIAEYAHLLDKVTVMSVDPGYAGQKFIPESLNKIRKLINMRKNNGYHYL-TEI 163
Query: 624 DGGVGPSTINCCANAG 671
DG T A +G
Sbjct: 164 DGSCNEKTFGQIAESG 179
Score = 34.3 bits (75), Expect = 2.7
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 146 DLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLT 247
DL+Q ++E ++ AD+ H+D+MDG +V N+T
Sbjct: 2 DLTQ-FKEQITAMNKKADFYHVDIMDGNYVRNIT 34
>UniRef50_Q9X243 Cluster: Ribulose-phosphate 3-epimerase; n=3;
Thermotogaceae|Rep: Ribulose-phosphate 3-epimerase -
Thermotoga maritima
Length = 220
Score = 77.8 bits (183), Expect = 2e-13
Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Frame = +3
Query: 267 KCLRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKV 446
K LR + K H+M+ PE +I + G + H E + + +V++ G +
Sbjct: 51 KALRKETKLPI-SVHLMITNPEDYIDRFIEEGADMVAIHYESTFHLHRLVHRVKDLGARA 109
Query: 447 GVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIE-- 620
VAI P TP++ + + I+ D VL+M+V PGF GQ+F+ + K++ LR+ L +E
Sbjct: 110 FVAINPHTPINLLSEIITDVDGVLVMSVNPGFSGQRFIARSLEKIRNLRKMVKELGLETE 169
Query: 621 --VDGGVGPSTINCCANAGA 674
VDGGV + GA
Sbjct: 170 IMVDGGVNEENASILVKNGA 189
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/56 (41%), Positives = 37/56 (66%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSEVPSRKNK 289
I SIL DL++L +E +++ ++ D +H DVMDG FVPN++FG P + ++ K
Sbjct: 4 IAASILACDLARLADEVKRVEEH-VDMIHFDVMDGHFVPNISFGLPVLKALRKETK 58
>UniRef50_Q2GE71 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Neorickettsia sennetsu str. Miyayama|Rep:
Ribulose-phosphate 3-epimerase - Neorickettsia sennetsu
(strain Miyayama)
Length = 220
Score = 77.8 bits (183), Expect = 2e-13
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
E H+M+ EQ +AG + H E + + ++ +KVGVA+ P T
Sbjct: 66 EVHLMILNAEQTFQDYINAGADTIFVHSEACFHLDRMVNAIKSQSVKVGVALNPATSEEA 125
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIE----VDGGVGPSTI 650
+ + D VLIMTV PGF Q F+ +Q+AKV +R L ++ VDGG+ T
Sbjct: 126 LRYLYNSIDAVLIMTVNPGFASQVFLTSQLAKVSLVRRRIVELGVDVTLAVDGGINAETA 185
Query: 651 NCCANAGA 674
N +AGA
Sbjct: 186 NLVVSAGA 193
Score = 59.7 bits (138), Expect = 6e-08
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +2
Query: 107 HLKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
H I PS+L+AD L+ + + L ++GAD +H+DVMDG FVPNLTFG
Sbjct: 2 HRMIKISPSLLSADFLNLHSDVKLLEESGADSIHIDVMDGHFVPNLTFG 50
>UniRef50_Q8SRP6 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Encephalitozoon cuniculi|Rep: Ribulose-phosphate
3-epimerase - Encephalitozoon cuniculi
Length = 217
Score = 77.0 bits (181), Expect = 4e-13
Identities = 47/120 (39%), Positives = 67/120 (55%)
Frame = +3
Query: 291 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGT 470
D F+ HMMVE P I + V+ T H E V D V +R+ + G+A+ P T
Sbjct: 64 DFVFDVHMMVESPLDIIMQIDLERVSLVTIHSE-VCDKAGVAEYLRKRNVLFGIALNPET 122
Query: 471 PVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPSTI 650
V + E + +D VLIM+V+PGFGGQKF E +AKV+ +R + + +DGG+ S I
Sbjct: 123 QVDDAE--MRSADFVLIMSVKPGFGGQKFQEECLAKVEEVRRYGKM--VGIDGGIEMSNI 178
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +2
Query: 110 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
LK IG SIL+ + L EE +L NG +HLDVMD FV N+TFG
Sbjct: 6 LKKRIGISILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFG 53
>UniRef50_Q6F0H7 Cluster: Pentose-5-phosphate-3-epimerase; n=1;
Mesoplasma florum|Rep: Pentose-5-phosphate-3-epimerase -
Mesoplasma florum (Acholeplasma florum)
Length = 227
Score = 75.4 bits (177), Expect = 1e-12
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 9/145 (6%)
Frame = +3
Query: 267 KCLRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKD-----VIEVCRKVRE 431
K ++ K + HMM E++I A+AG + + FH E + D V + K++
Sbjct: 54 KDIKDKYPKIKVDAHMMCSNSEKYIESFAEAGCDYFIFHYETLTDKNPITVNNIINKIKS 113
Query: 432 HGMKVGVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKV----QYLREN 599
+ MK +A+ P T ++ Y V+ M + PGF GQK +E+ +K+ +Y +EN
Sbjct: 114 YNMKPIIALNPETSFEHIKTYCDDLYAVMCMNILPGFNGQKIIESSYSKINIINKYRKEN 173
Query: 600 YPLLDIEVDGGVGPSTINCCANAGA 674
+ I DGG+ T +AGA
Sbjct: 174 NKVFKIMTDGGLREDTYKEILDAGA 198
>UniRef50_Q7VCA2 Cluster: Pentose-5-phosphate-3-epimerase; n=10;
Cyanobacteria|Rep: Pentose-5-phosphate-3-epimerase -
Prochlorococcus marinus
Length = 247
Score = 74.9 bits (176), Expect = 2e-12
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 6/104 (5%)
Frame = +3
Query: 381 HIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFM 560
H+E + + K+R+ G VA+ P TP+ V+ + + D VL+MTV PGFGGQ ++
Sbjct: 107 HVEANVHLHRILGKIRQLGGSPSVALNPHTPMEMVKDVLDMVDHVLVMTVNPGFGGQAYI 166
Query: 561 ENQMAKVQYLRE-----NYPLLDIEVDGGVGPS-TINCCANAGA 674
+ K++ LRE NY +DIEVDGG+ TI+ C AGA
Sbjct: 167 PTMLNKIKSLREVIVENNYD-IDIEVDGGIKADWTISQCCAAGA 209
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +2
Query: 128 PSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
PS+L AD + + + + L + G D + DVMDG FVPNLTFG
Sbjct: 16 PSVLPADWANMGQCVKDLEEAGVDRIQFDVMDGNFVPNLTFG 57
>UniRef50_Q6KH83 Cluster: Ribulose-5-phosphate 3-epimerase; n=2;
Mycoplasma|Rep: Ribulose-5-phosphate 3-epimerase -
Mycoplasma mobile
Length = 218
Score = 74.9 bits (176), Expect = 2e-12
Identities = 41/118 (34%), Positives = 71/118 (60%), Gaps = 7/118 (5%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVK--DVIEVCRKVREHGM-KVGVAIKPGTP 473
+ H+MV+ ++ + TFH E + ++ ++ +K HG+ K G+A+KP T
Sbjct: 64 DIHLMVQDVSFYVEKFLNKA-EYITFHFEALNYNEIKKILKKY--HGLQKFGIALKPKTN 120
Query: 474 VSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKV----QYLRENYPLLDIEVDGGV 635
+ ++ +Y+ D+VLIM+VEPG+GGQKF+ N + K+ +YL E + I+VDGG+
Sbjct: 121 IEQIYEYLPYVDLVLIMSVEPGYGGQKFIPNSLEKITKLKKYLLERSLDIVIQVDGGI 178
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVP 238
LI PS+LN + S+ E + K+++ G ++H D MDG+FVP
Sbjct: 3 LISPSLLNVEESKRAEIATKMIELGIKWIHYDFMDGKFVP 42
>UniRef50_Q2SSL7 Cluster: Ribulose-phosphate 3-epimerase; n=3;
Mollicutes|Rep: Ribulose-phosphate 3-epimerase -
Mycoplasma capricolum subsp. capricolum (strain
California kid / ATCC27343 / NCTC 10154)
Length = 225
Score = 72.1 bits (169), Expect = 1e-11
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Frame = +3
Query: 291 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKV---REHGMKVGVAIK 461
D F ++ ++ E + A T HIE +KD + + + +++ + +AI
Sbjct: 65 DVHFMVNVKTKQFEDFFLDYIKAKPEMMTMHIESLKDNSTINKFINLCKQNNILASLAIS 124
Query: 462 PGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYL----RENYPLLDIEVDG 629
P T VS V Y+ D VL+M+VEPGFGGQKF+ + + K++ L +E IEVDG
Sbjct: 125 PNTDVSLVYPYLDKLDNVLVMSVEPGFGGQKFITSSLKKIEILDQLRKEKKYKYTIEVDG 184
Query: 630 GVGPSTINCCANAG 671
G+ T AG
Sbjct: 185 GINEQTSVLVKQAG 198
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +2
Query: 113 KALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
K +I PS+L+A+ L E + N +++H DVMD FVPNLTFG
Sbjct: 3 KYIIAPSVLSANFMDLKNELELCKKNNINWIHYDVMDFDFVPNLTFG 49
>UniRef50_A6LBP4 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Parabacteroides distasonis ATCC 8503|Rep:
Ribulose-phosphate 3-epimerase - Parabacteroides
distasonis (strain ATCC 8503 / DSM 20701 / NCTC11152)
Length = 223
Score = 72.1 bits (169), Expect = 1e-11
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Frame = +3
Query: 282 KIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIK 461
KI + H+++E P I M + + H E + V+E +++ G K G+A+
Sbjct: 59 KITGLPVDIHLLMEHPRTIIRSMDIRDGDIVSIHSECKESVLENAAFIKQRGAKFGLALN 118
Query: 462 PGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKV----QYL-RENYPLLDIEVD 626
P T + EV KY+ D++L+M + PGF G + M KV QYL + NY ++I VD
Sbjct: 119 PDTSIDEVRKYLPYVDVILLMLIVPGFAGTMMIHGMMEKVGETRQYLDQHNYGNVEICVD 178
Query: 627 GGVGPSTINCCANAGA 674
G V GA
Sbjct: 179 GSVSTERAKYMRQLGA 194
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +2
Query: 131 SILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
S++ ADL L + L +NG DYLH+D+MD FVPNLTFG
Sbjct: 10 SLMCADLVNLERDIHILEENGVDYLHVDIMDAAFVPNLTFG 50
>UniRef50_A6LQT7 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Clostridium beijerinckii NCIMB 8052|Rep:
Ribulose-phosphate 3-epimerase - Clostridium
beijerinckii NCIMB 8052
Length = 235
Score = 71.7 bits (168), Expect = 1e-11
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Frame = +3
Query: 267 KCLRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKV 446
K LR KI D F+ H+M E +I M GV+Q +FH E + ++++G+K
Sbjct: 56 KSLR-KITDMNFDVHIMSNNNEFFIQEMIKIGVSQISFHYESSTHIDRYINLIKKNGIKA 114
Query: 447 GVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLL----- 611
G+A+ P T +S +E + D +++M + PGF K + + + +++ Y L+
Sbjct: 115 GLALNPSTSLSVLEYCLPQCDTIMLMLINPGFATDKNEKQVIYAEKKVKDLYKLIKGNGL 174
Query: 612 --DIEVDGGVGPSTINCCANAGA 674
IEVDG V TI AGA
Sbjct: 175 NTKIEVDGRVSLDTIPGLVKAGA 197
Score = 41.1 bits (92), Expect = 0.024
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
+I PS++ ADL L + +++ G D +H+D++DG F P++ G
Sbjct: 7 IISPSVMCADLCNLEKSIREIEKEGIDTIHIDLIDGYFSPSMPLG 51
>UniRef50_Q8RD62 Cluster: Pentose-5-phosphate-3-epimerase; n=1;
Thermoanaerobacter tengcongensis|Rep:
Pentose-5-phosphate-3-epimerase - Thermoanaerobacter
tengcongensis
Length = 214
Score = 71.3 bits (167), Expect = 2e-11
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Frame = +3
Query: 282 KIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIK 461
+I D E H+ + PE ++ ++AG + + + + RK++ G K GVA+
Sbjct: 55 RITDLPIEVHLEILNPENYVEIFSEAGADIIIVQFDTCSHPLRILRKIKALGKKAGVALS 114
Query: 462 PGTPVSEVEKYISISDMVLIMTVEPGFGGQKFM-----ENQMAKVQYLRENYPLLDIEVD 626
P + ++ D +L M+VEPGFGGQ F + ++AKVQ L+E + I VD
Sbjct: 115 PCVSFESLRWCLNDVDYLLFMSVEPGFGGQNFETFTIDKIKLAKVQ-LKEMGFSIPIGVD 173
Query: 627 GGVGPSTINCCANAG 671
GGV IN G
Sbjct: 174 GGVNLGNINLLREVG 188
Score = 36.3 bits (80), Expect = 0.68
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTF 250
I SIL AD + L +E +L G D++H+DV+DG + N F
Sbjct: 3 ISASILAADTAFLGKEVLELEKLGIDFIHVDVIDGHYANNFGF 45
>UniRef50_Q67LX3 Cluster: Ribulose-5-phosphate 3-epimerase; n=3;
Firmicutes|Rep: Ribulose-5-phosphate 3-epimerase -
Symbiobacterium thermophilum
Length = 213
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+M+E P ++ A G+ H E K+ + G G+AI PGTPV
Sbjct: 55 DVHLMIEDPGNYVEKFAKLGIKVIYTHPEADYHPARTLLKIADAGAAPGIAINPGTPVEA 114
Query: 483 VEKYISISDMVLIMTVEPGFGGQ---KFMENQMAKVQYLRENYPLLDIEVDGGVGPSTIN 653
+E + ++ VL+MTV PGF GQ F++ ++ ++ L+E Y I +DG + +
Sbjct: 115 IEPLLHLAQYVLVMTVNPGFAGQPYLSFVDEKVDRLAELKERYG-YRIVIDGACTAAVVE 173
Query: 654 CCANAG 671
A G
Sbjct: 174 RLAPRG 179
Score = 37.1 bits (82), Expect = 0.39
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +2
Query: 143 ADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
A L E +L G D HLDVMDG+FVPN G
Sbjct: 3 AHFGNLAHEVAELEAAGIDMFHLDVMDGRFVPNFGMG 39
>UniRef50_A0RTR4 Cluster: Transketolase, N-terminal subunit; n=1;
Cenarchaeum symbiosum|Rep: Transketolase, N-terminal
subunit - Cenarchaeum symbiosum
Length = 504
Score = 70.9 bits (166), Expect = 3e-11
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Frame = +3
Query: 300 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVI--EVCRKVREHGMKVGVAIKPGTP 473
F+TH+M+++P + I A+AG + T H E E+ +R++ + VG+A+ PGT
Sbjct: 301 FDTHLMIDEPGRHIREYAEAGSDIITVHAEACDSSTFGEIHDYLRDNLVGVGLAVNPGTE 360
Query: 474 VSE-VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD----IEVDGGVG 638
+ K+ D V+IM+V PG GQK++E+ AK + E IE DGGV
Sbjct: 361 LPPWAAKFAPTIDQVIIMSVVPGKSGQKYIEDTHAKASRMAEQLAGHGFEGVIEADGGVT 420
Query: 639 PSTINCCANAGA 674
I C GA
Sbjct: 421 EQNIGSCFTDGA 432
Score = 59.7 bits (138), Expect = 6e-08
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGH 256
I PSI+ D++ L E ++ + GADY+HLDVMDG+FVPN TF H
Sbjct: 243 IAPSIIAGDMTDLSGEVRRCAEGGADYIHLDVMDGRFVPNKTFDH 287
>UniRef50_Q4AAI3 Cluster: Ribulose-phosphate 3-epimerase; n=5;
Mycoplasma hyopneumoniae|Rep: Ribulose-phosphate
3-epimerase - Mycoplasma hyopneumoniae (strain J / ATCC
25934 / NCTC 10110)
Length = 216
Score = 70.1 bits (164), Expect = 5e-11
Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Frame = +3
Query: 282 KIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEP--VKDVIEVCRKVREHGMKVGVA 455
K K+ + H+M PE+ I + VN T H E + E+ K +K+G+A
Sbjct: 59 KSKEFISDVHLMSVNPEEQIKQLLGY-VNFATIHFESRNYAQIKEIISKYSRK-IKIGIA 116
Query: 456 IKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYL----RENYPLLDIEV 623
IKP T + ++ + +VLIM+VEPG GGQ F+EN K++ L +EN + I+V
Sbjct: 117 IKPETKIEQIYDLLPEIQLVLIMSVEPGKGGQAFIENTYKKIEELSKIIQENNYKIIIQV 176
Query: 624 DGGV 635
DGG+
Sbjct: 177 DGGI 180
Score = 38.3 bits (85), Expect = 0.17
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 113 KALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSEVPSRKNK 289
+ +I PS+LN S + ++ L+ G + H D MDG FV N+ P + +K+K
Sbjct: 3 RKIISPSLLNIKKSSRLKSTRIFLNLGIKWFHFDFMDGIFVKNVAISIPEIKNIIKKSK 61
>UniRef50_Q5EU44 Cluster: Ribulose-phosphate 3-epimerase; n=2;
Buchnera aphidicola (Cinara cedri)|Rep:
Ribulose-phosphate 3-epimerase - Buchnera aphidicola
(Cinara cedri)
Length = 220
Score = 69.7 bits (163), Expect = 6e-11
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Frame = +3
Query: 297 FFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPV 476
FF+ +M + I AD V + H E +++ G VG+A+ P T +
Sbjct: 64 FFDVPLMASSGDSLIPLFADLNVKFISIHPETTNPFPRTIPLIKKIGCNVGLALNPSTSL 123
Query: 477 SEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR----ENYPLLDIEVDGGVGPS 644
+ ++ I+ D++L+M V PGFGGQ F++N K++ +R + + + VDGGV S
Sbjct: 124 NCLDYIINELDLILVMAVNPGFGGQVFLKNSFKKIKPIRYLINKKKSNILLSVDGGVNQS 183
Query: 645 TINCCANAGA 674
I ++GA
Sbjct: 184 NILKIIDSGA 193
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +2
Query: 113 KALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
K LI PSIL+AD L E KLL G +H D+MD +VPN T G
Sbjct: 3 KFLIIPSILSADFCYLGNELHKLLRAGCQLIHFDLMDNHYVPNFTIG 49
>UniRef50_P39362 Cluster: Protein sgcE; n=6; Enterobacteriaceae|Rep:
Protein sgcE - Escherichia coli (strain K12)
Length = 210
Score = 69.3 bits (162), Expect = 8e-11
Identities = 35/122 (28%), Positives = 58/122 (47%)
Frame = +3
Query: 309 HMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSEVE 488
H M+ +P++W +A+ H E + E ++R G + G+ P TP+
Sbjct: 64 HFMLARPQRWFNALAEIRPAWIFVHAETLDYPSETLTEIRHTGARAGLVFNPATPIDAWR 123
Query: 489 KYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPSTINCCANA 668
S D V++MT EP GQ+F+ + K+Q +R +P + DGG+ + A A
Sbjct: 124 YLASELDGVMVMTSEPDGQGQRFIPSMCEKIQKVRTAFPQTECWADGGITLAAAQQLAAA 183
Query: 669 GA 674
GA
Sbjct: 184 GA 185
>UniRef50_Q7NAL1 Cluster: Rpe; n=2; Mycoplasma gallisepticum|Rep:
Rpe - Mycoplasma gallisepticum
Length = 216
Score = 67.7 bits (158), Expect = 2e-10
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Frame = +3
Query: 309 HMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRK----VREHGMKVGVAIKPGTPV 476
H+MV K I A +Q +FH+EP+ + ++ K ++ + K G+A K T V
Sbjct: 64 HLMVNKVANHILVYAKTRCDQISFHVEPLANNKQLINKYLAYIKTNNKKAGLAFKFNTDV 123
Query: 477 SEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGV 635
++ I + D V +M+VEPG GGQ F + L + P L+IE+DGG+
Sbjct: 124 NDYLDQIKLVDYVTLMSVEPGAGGQAFNPLVYRNIAKLIKFNPKLEIEIDGGI 176
>UniRef50_Q24T41 Cluster: Putative uncharacterized protein; n=1;
Desulfitobacterium hafniense Y51|Rep: Putative
uncharacterized protein - Desulfitobacterium hafniense
(strain Y51)
Length = 218
Score = 63.7 bits (148), Expect = 4e-09
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
E H+M+ P +I ADAGV+ H E K++ GM G+AI PGT V
Sbjct: 65 ECHLMITDPYNYIDTFADAGVDVVYIHPESEYQPSATIEKIQNAGMIPGIAINPGTSVET 124
Query: 483 VEKYISISDMVLIMTVEPGFGGQ---KFMENQMAKVQYLRENY 602
+ + + I VL+M V PG GQ F+ +++ K+ +++ Y
Sbjct: 125 ITELLKIVGRVLVMCVNPGNAGQIYLPFVHDKICKLLDMQKEY 167
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
L S++ A+ L E + L G D H+D+MDG FV N G
Sbjct: 5 LFSASMMCANYGHLETEIRSLETAGIDSFHVDIMDGHFVHNFAMG 49
>UniRef50_A5KKQ4 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 234
Score = 63.7 bits (148), Expect = 4e-09
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVK-DVIEVCRKVREHGMKVGVAIKPGTPVS 479
+ H+MV+ P+ +I A AG T H + ++ D K+ G K G+A+ P P+
Sbjct: 71 DAHLMVKHPQDYIEACAAAGAAYITPHTDCIESDAFVTINKIISLGCKAGIAMNPAAPLE 130
Query: 480 EVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYL---RENYPL-LDIEVDGGVGPST 647
+ Y+ + V IM V+ G+ GQK + K++ L RE L IE DG +
Sbjct: 131 AIRYYLPLLSKVTIMIVDAGYAGQKVITQMYDKIRTLAKWREEMKLDFLIEADGSMNAGV 190
Query: 648 INCCANAGA 674
AGA
Sbjct: 191 YAPLYEAGA 199
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 113 KALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
K ++ PS+ DL + K +D AD+LH+D+ DG +V TFG
Sbjct: 10 KLMLAPSMGCCDLYD-FGHQVKFIDEHADFLHIDIKDGNYVK--TFG 53
>UniRef50_Q8D1X6 Cluster: Rpe protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
Rpe protein - Wigglesworthia glossinidia brevipalpis
Length = 233
Score = 62.9 bits (146), Expect = 7e-09
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
E H+M + ++ + N FH E K+V + + +R++ K G+A T ++
Sbjct: 67 EVHLMAKPIDELVVSFIKTKANCIIFHPESTKNVNFLLKLIRKNNCKAGLAFTLTTSLNY 126
Query: 483 VEK--YISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRE-----NYPLLDIEVDGGVGP 641
++ + D+VLIM+V PGF GQKF ++ + +++ R+ Y +L I +DGGV
Sbjct: 127 LKNKNIVKNLDIVLIMSVSPGFSGQKFQKSAIKRLKIARKLIDDSGYNIL-IGIDGGVND 185
Query: 642 STINCCANAGA 674
I A AGA
Sbjct: 186 DNIYDVAYAGA 196
Score = 53.2 bits (122), Expect = 6e-06
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
I PSIL A+ + L EE +K++D GAD +H D MD +VPNL+ G
Sbjct: 7 ISPSILAANFANLGEEIRKVIDAGADIIHFDAMDNHYVPNLSIG 50
>UniRef50_Q6F1P3 Cluster: Pentose-5-phosphate-3-epimerase; n=1;
Mesoplasma florum|Rep: Pentose-5-phosphate-3-epimerase -
Mesoplasma florum (Acholeplasma florum)
Length = 223
Score = 62.5 bits (145), Expect = 9e-09
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Frame = +3
Query: 291 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPV--KDVIEVCRKVREHGMKVGVAIKP 464
D F + ++ E + + T H+E + K++ + + + +A+ P
Sbjct: 65 DIHFMVKVKTKRFEDFFSEYIKCKPTMMTMHVESMSKKEINMFYNICKTNNIMFSLAVSP 124
Query: 465 GTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRE----NYPLLDIEVDGG 632
T + + K+I + +LIM+VEPGFGGQ F+ + KV++L E N IE+DGG
Sbjct: 125 KTNIKVLNKWIDKLENILIMSVEPGFGGQSFIPEVLEKVKHLAELKKTNGYTYSIEIDGG 184
Query: 633 VGPSTINCCANAG 671
+ T +AG
Sbjct: 185 INDETSKKAIDAG 197
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 113 KALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
K I PS L+A+ + L E ++ + +++H DVMD FVPNLTFG
Sbjct: 3 KITIAPSFLSANFADLKNEIKRCKEANIEWIHYDVMDYDFVPNLTFG 49
>UniRef50_Q6MTK7 Cluster: Ribulose-phosphate 3-epimerase; n=2;
Mycoplasma|Rep: Ribulose-phosphate 3-epimerase -
Mycoplasma mycoides subsp. mycoides SC
Length = 218
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/93 (29%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
Frame = +3
Query: 375 TFHIEPVKDVIEV---CRKVREHGMKVGVAIKPGTPVSEVEKYISISDMVLIMTVEPGFG 545
TFH + D+ + +++++ +K G+A+ +++++K ++ ++V M+++PGF
Sbjct: 85 TFHYNAINDLNQAKLWINEIKKYNLKPGIALDLNNEINDIKKILNEIEVVTFMSIKPGFT 144
Query: 546 GQKFMENQMAKVQYLRE---NYPLLDIEVDGGV 635
GQKF E+ K+ ++E YP L ++DGGV
Sbjct: 145 GQKFEESSWTKLNLIKELKLKYPHLKFQIDGGV 177
>UniRef50_P56188 Cluster: Ribulose-phosphate 3-epimerase; n=24;
Epsilonproteobacteria|Rep: Ribulose-phosphate
3-epimerase - Helicobacter pylori (Campylobacter pylori)
Length = 217
Score = 61.7 bits (143), Expect = 2e-08
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+MVE + A + H E K V + ++ G+ G+ + P T
Sbjct: 60 DVHLMVENASFFAELFAPLKPQIISIHAENEKHPHRVLQLIKNLGITPGIVLNPHTHEES 119
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFME---NQMAKVQYLRENY-PLLDIEVDGGVGPSTI 650
++ + +VL+M+V PGFGGQKF++ + KV+ L + Y P +EVDGGV I
Sbjct: 120 IKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKNI 179
Query: 651 NCCANAG 671
AG
Sbjct: 180 FELQQAG 186
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFG 253
+ PS+L+AD L +E + + + AD+LH+DVMDG +VPNLT G
Sbjct: 3 VAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMG 44
>UniRef50_A7DRC2 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
Ribulose-phosphate 3-epimerase - Candidatus
Nitrosopumilus maritimus SCM1
Length = 555
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGH 256
+I PSI+ D+S L E ++ + ADY+HLDVMDGQFVPN TF H
Sbjct: 292 MIAPSIIAGDMSNLENEVKRCVSGRADYIHLDVMDGQFVPNKTFDH 337
Score = 60.5 bits (140), Expect = 4e-08
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Frame = +3
Query: 300 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVI--EVCRKVREHGMKVGVAIKPGTP 473
F++H+M+ +P + + DAG + T H E + E+ ++++ + +G AI P T
Sbjct: 351 FDSHLMINEPVKHVRDYIDAGSDIITVHAEVTDESSFGEIHDVLKQNQVGIGFAINPDTE 410
Query: 474 VSEVE-KYISISDMVLIMTVEPGFGGQKFMENQMAKV----QYLRENYPLLDIEVDGGVG 638
+ E K+I D +++M+V PG GQK++E AK+ L E+ IE DGGV
Sbjct: 411 LPEWSYKFIPSLDQLIVMSVVPGKSGQKYIEETHAKMARLNTILNEHNFSGYIEADGGVN 470
Query: 639 PSTINCCANAGA 674
I GA
Sbjct: 471 LENIGSVFADGA 482
>UniRef50_Q3WJM9 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Frankia sp. EAN1pec|Rep: Ribulose-phosphate 3-epimerase
- Frankia sp. EAN1pec
Length = 246
Score = 58.0 bits (134), Expect = 2e-07
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Frame = +3
Query: 300 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVS 479
F H+MV +P A AG + T H E DV +R+HG G+A+ TPV
Sbjct: 80 FHAHLMVRRPAPLAALFAQAGADLITVHAETGDDVHPALDTIRQHGKAAGLALTLDTPVM 139
Query: 480 EVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR------ENYPLLDIEVDGGVGP 641
V Y+ D+++++ G G +++ LR + I DGG+
Sbjct: 140 AVRPYLDAVDVIVLVGTPIGTRGTGLAPAAFDRLRTLRGLLHETGRDQAVKILADGGIHQ 199
Query: 642 STINCCANAGA 674
T+ A+AGA
Sbjct: 200 PTVGPLADAGA 210
Score = 34.7 bits (76), Expect = 2.1
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 113 KALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTF 250
+ L+ S+ +ADL+ L E ++ AD H DV D QFVP+L F
Sbjct: 20 RLLVDVSVWSADLACLRAEIERA-SPVADLFHFDVGDSQFVPDLLF 64
>UniRef50_P75522 Cluster: Probable ribulose-phosphate 3-epimerase;
n=2; Mycoplasma|Rep: Probable ribulose-phosphate
3-epimerase - Mycoplasma pneumoniae
Length = 215
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Frame = +3
Query: 309 HMMVEKPEQWITP--MADAGVNQYTFHIEP--VKDVIEVCRKVREHGMKVGVAIKPGTPV 476
H+MV+ EQ I P + V + +FH+EP + + ++++ G +VG+A K TP+
Sbjct: 69 HLMVQALEQ-ILPVYLHHQAVKRISFHVEPFDIPTIKHFIAQIKQAGKQVGLAFKFTTPL 127
Query: 477 SEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGV 635
E+ + D V +M+V PG GGQ F ++ + + IE+DGG+
Sbjct: 128 VNYERLVQQLDFVTLMSVPPGKGGQAFNSAVFNNLKQAHKYH--CSIEIDGGI 178
>UniRef50_Q9PQ34 Cluster: D-ribulose-5-phosphate 3 epimerase; n=1;
Ureaplasma parvum|Rep: D-ribulose-5-phosphate 3
epimerase - Ureaplasma parvum (Ureaplasma urealyticum
biotype 1)
Length = 219
Score = 55.2 bits (127), Expect = 1e-06
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Frame = +3
Query: 291 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIE--PVKDVIEVCRKVREHGMKVGVAIKP 464
D H+MV P + I + +FH E + + + ++++H + G+AI P
Sbjct: 59 DFLVHIHLMVINPLEKIKQYFIYKPTRISFHFEMNDYQTNLLIINEIKKHHVLAGIAIHP 118
Query: 465 GTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRE----NYPLLDIEVDGG 632
+++ Y+ D + M+V PG GGQ F+E + K++ L E N IE+DGG
Sbjct: 119 CLSLNDYASYLKEVDYITFMSVIPGKGGQIFLEESLLKLKKLYEYKIKNNFKFKIEIDGG 178
Query: 633 V 635
+
Sbjct: 179 I 179
>UniRef50_A6CC62 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Planctomyces maris DSM 8797|Rep: Ribulose-phosphate
3-epimerase - Planctomyces maris DSM 8797
Length = 91
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 MVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDI-EVDGGVGPSTINCCANAGA 674
+VLIM+VEPGFGGQ F+E+ + K++ L+ P I VDGG+ TI A AGA
Sbjct: 2 LVLIMSVEPGFGGQSFIESSIEKIKQLKSMIPADTILSVDGGIAMDTIAETAGAGA 57
>UniRef50_A5KTL0 Cluster: Ribulose-phosphate 3-epimerase; n=1;
candidate division TM7 genomosp. GTL1|Rep:
Ribulose-phosphate 3-epimerase - candidate division TM7
genomosp. GTL1
Length = 211
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
+ H+M ++P + + N H E D++ + + +++ ++ GVA+ T +
Sbjct: 61 DIHLMFQRPLAHLETLISLHPNMVIIHAEAEGDLVGMLKHLQKLDIRAGVALLKPTEPKD 120
Query: 483 VEKYISISDMVLIMTVEPG-FGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPSTI 650
+K I+++D VL+ + + G FGGQ + + KV ++ P +DI DGG S +
Sbjct: 121 AQKLIAVADHVLLFSGDLGHFGGQADL-GILKKVTEVKAFNPNVDIGWDGGANASNV 176
>UniRef50_Q14K80 Cluster: Ribulose-phosphate 3-epimerase; n=2;
eudicotyledons|Rep: Ribulose-phosphate 3-epimerase -
Platanus acerifolia (London plane tree)
Length = 123
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/43 (46%), Positives = 34/43 (79%)
Frame = +2
Query: 119 LIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLT 247
++ PSIL+A+ ++L E+ + + G D++H+DVMDG+FVPN+T
Sbjct: 62 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNIT 104
>UniRef50_Q9CLF5 Cluster: Dod; n=4; Pasteurellaceae|Rep: Dod -
Pasteurella multocida
Length = 229
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +3
Query: 303 ETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREH--GMKVGVAIKPGTPV 476
+ H+MV P ADAG + T +E + E +REH + +G+ + P T +
Sbjct: 72 DVHLMVNDPFHVAKACADAGADIITLQVEQTDCLAETISYLREHYPDLLIGLTLCPDTEI 131
Query: 477 SEVEKYISISDMVLIMTVEPGFG 545
+ Y++ D++ I+T++P G
Sbjct: 132 DLLTPYLAQVDLIQILTLDPRTG 154
>UniRef50_A5Z893 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 104
Score = 41.1 bits (92), Expect = 0.024
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +3
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPL--LDIEVDGGVGPSTI 650
V+ + I D V+IMTV PGF GQ ++E K++ +N +I VDGG+ I
Sbjct: 13 VKNILHIVDYVMIMTVNPGFAGQSYLEYIDEKIEEFIQNRKKYHYEIVVDGGISEEKI 70
>UniRef50_Q986S1 Cluster: Ribulose-5-phosphate 3-epimerase; n=3;
Rhizobiales|Rep: Ribulose-5-phosphate 3-epimerase -
Rhizobium loti (Mesorhizobium loti)
Length = 240
Score = 38.7 bits (86), Expect = 0.13
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 8/130 (6%)
Frame = +3
Query: 309 HMMVEKP--EQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSE 482
H+MV+ E +AG + + H E + + R RE G + GV ++ TPV
Sbjct: 82 HLMVDAAIVEAQTRQFIEAGADMISVHAENGEAGLRAVRLARELGAEAGVVLRLETPVEA 141
Query: 483 VEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRE------NYPLLDIEVDGGVGPS 644
V+ ++S V ++ G GQ + ++ R + + DGG+
Sbjct: 142 VKPFVSEVAFVTLLGTAIGVKGQSLSDKACDRLGAARAILRGAGREAEVALAADGGIRHE 201
Query: 645 TINCCANAGA 674
T+ AGA
Sbjct: 202 TVPLLRAAGA 211
>UniRef50_UPI0000EBF232 Cluster: PREDICTED: similar to mucin 16;
n=2; Bos taurus|Rep: PREDICTED: similar to mucin 16 -
Bos taurus
Length = 5553
Score = 37.9 bits (84), Expect = 0.22
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = -3
Query: 547 PPNPGSTVIIKTMSDIEIYFSTSETGVPGFIATPTFIPCSLTFLHTSITSLTGS 386
P + T + T+S+ E +FS+ +T PG + +PT +P L TSIT TGS
Sbjct: 366 PDSKEGTSQVLTLSNAEHHFSSPDTSPPGDLMSPTSVP---LLLSTSITDPTGS 416
>UniRef50_O80585 Cluster: Methylenetetrahydrofolate reductase 2;
n=14; Eukaryota|Rep: Methylenetetrahydrofolate reductase
2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 594
Score = 37.1 bits (82), Expect = 0.39
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 306 THMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIE 410
T+M V K EQW++ A A VN T+ + P K++I+
Sbjct: 493 TYMAVNKGEQWVSNTAQADVNAVTWGVFPAKEIIQ 527
>UniRef50_Q7UWN5 Cluster: Nitrite reductase [NAD(P)H] large subunit;
n=1; Pirellula sp.|Rep: Nitrite reductase [NAD(P)H]
large subunit - Rhodopirellula baltica
Length = 685
Score = 35.5 bits (78), Expect = 1.2
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +3
Query: 336 WITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSEVEKYIS-ISDM 512
W+ P++ + + F + D+ + R VREHG K I G E K I+ +
Sbjct: 145 WVPPISGSD-SPGVFVYRTIDDLEAIQRYVREHGAKTSAVIGGGLLGLEAAKVITDLGLA 203
Query: 513 VLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEV 623
I+ V PG ++ ++ Q AKV LRE L ++V
Sbjct: 204 TTILEVAPGLMPRQ-LDAQAAKV--LREKVESLGVDV 237
>UniRef50_A0LHX6 Cluster: Sensor protein; n=1; Syntrophobacter
fumaroxidans MPOB|Rep: Sensor protein - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 822
Score = 34.3 bits (75), Expect = 2.7
Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 324 KPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREH-GMKVGVAIKPGTPVSEVEKYIS 500
+PE+ +P G + IE + +C+++ E G +V +A+ + + ++
Sbjct: 681 RPEEKRSPQELRGGTETVLLIEDEASIRNICKQMLEQFGYRVMIAVDGDSGLRAFREHWK 740
Query: 501 ISDMVLIMTVEPGFGGQKFMENQMAKV 581
D+VL+ + PG GG++ ++ ++ KV
Sbjct: 741 DMDVVLLDLIMPGMGGKECLK-ELLKV 766
>UniRef50_Q3ZWZ3 Cluster: Histone acetyltransferase, ELP3 family;
n=3; Dehalococcoides|Rep: Histone acetyltransferase,
ELP3 family - Dehalococcoides sp. (strain CBDB1)
Length = 459
Score = 33.9 bits (74), Expect = 3.6
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +3
Query: 393 VKDVIEVCRKVREHGMKVGVAIKPGTPVSEVEKYISISDMV 515
V DV E +RE+G+KV PG P S EK +++S MV
Sbjct: 177 VSDVAEATCLLREYGLKVHYHWMPGLPGSSPEKDLALSRMV 217
>UniRef50_Q2JC19 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Frankia sp. CcI3|Rep: Ribulose-phosphate 3-epimerase -
Frankia sp. (strain CcI3)
Length = 259
Score = 33.9 bits (74), Expect = 3.6
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 107 HLKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTF 250
H + L+ S+ +ADL+ L E + AD +H D+ DG F P+L F
Sbjct: 21 HGRLLLDVSLWSADLAALGVELDRT-SGVADVVHFDIADGSFGPDLMF 67
>UniRef50_Q05FR4 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Candidatus Carsonella ruddii PV|Rep: Ribulose-phosphate
3-epimerase - Carsonella ruddii (strain PV)
Length = 173
Score = 33.1 bits (72), Expect = 6.3
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +3
Query: 489 KYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGV 635
KY + ++ +LIM+V PGFG QKF+ + + KV+ I +DGGV
Sbjct: 92 KYFNYNN-ILIMSVIPGFGNQKFLISTLNKVK--------KKINIDGGV 131
>UniRef50_UPI00015BAFD7 Cluster: Reverse gyrase; n=1; Ignicoccus
hospitalis KIN4/I|Rep: Reverse gyrase - Ignicoccus
hospitalis KIN4/I
Length = 1087
Score = 32.7 bits (71), Expect = 8.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 378 FHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSEVEK 491
FH +PV+ EV R G+K V + G P+ EVE+
Sbjct: 260 FHEDPVEGAAEVVRYFTSEGLKGIVFVHEGFPIEEVER 297
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,749,673
Number of Sequences: 1657284
Number of extensions: 11421945
Number of successful extensions: 29060
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 28131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28982
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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