BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_N16
(675 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC072401-1|AAH72401.1| 228|Homo sapiens ribulose-5-phosphate-3-... 174 2e-43
BC016764-1|AAH16764.1| 228|Homo sapiens ribulose-5-phosphate-3-... 174 2e-43
BC005148-1|AAH05148.2| 228|Homo sapiens ribulose-5-phosphate-3-... 174 2e-43
AJ224326-1|CAA11895.1| 174|Homo sapiens ribulose-5-phosphate-ep... 174 2e-43
DQ120706-1|ABC40667.1| 228|Homo sapiens rcRPE protein. 162 1e-39
AK056028-1|BAB71076.1| 178|Homo sapiens protein ( Homo sapiens ... 149 1e-35
AC007038-1|AAX93087.1| 178|Homo sapiens unknown protein. 149 1e-35
AK093658-1|BAC04212.1| 178|Homo sapiens protein ( Homo sapiens ... 144 2e-34
EF102434-1|ABK97618.1| 375|Homo sapiens killer-cell Ig-like rec... 30 8.6
DQ371554-1|ABD38574.1| 375|Homo sapiens killer Ig receptor prot... 30 8.6
AL133414-13|CAC40714.1| 375|Homo sapiens 1060P11.6 (killer cell... 30 8.6
AJ632294-1|CAG15143.2| 375|Homo sapiens killer-cell Ig like rec... 30 8.6
AJ544587-1|CAD67580.1| 375|Homo sapiens killer-cell Ig-like rec... 30 8.6
AF272157-1|AAG44797.1| 375|Homo sapiens killer cell immunoglobu... 30 8.6
AF271608-1|AAG44778.1| 375|Homo sapiens killer cell immunoglobu... 30 8.6
AF271607-1|AAG44777.1| 375|Homo sapiens killer cell immunoglobu... 30 8.6
AF217487-1|AAG37101.1| 375|Homo sapiens killer cell Ig-like rec... 30 8.6
AF217485-1|AAG40152.1| 375|Homo sapiens killer cell Ig-like rec... 30 8.6
AF204903-1|AAF72845.1| 375|Homo sapiens killer-cell immunoglobu... 30 8.6
>BC072401-1|AAH72401.1| 228|Homo sapiens
ribulose-5-phosphate-3-epimerase protein.
Length = 228
Score = 174 bits (424), Expect = 2e-43
Identities = 78/129 (60%), Positives = 98/129 (75%)
Frame = +3
Query: 288 KDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPG 467
+D FF+ HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMKVG+AIKPG
Sbjct: 63 QDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG 122
Query: 468 TPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPST 647
T V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LDIEVDGGVGP T
Sbjct: 123 TSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDT 182
Query: 648 INCCANAGA 674
++ CA AGA
Sbjct: 183 VHKCAEAGA 191
Score = 80.2 bits (189), Expect = 6e-15
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSE 268
IGPSILN+DL+ L E ++LD+GADYLHLDVMDG FVPN+TFGHP E
Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVE 55
>BC016764-1|AAH16764.1| 228|Homo sapiens
ribulose-5-phosphate-3-epimerase protein.
Length = 228
Score = 174 bits (424), Expect = 2e-43
Identities = 78/129 (60%), Positives = 98/129 (75%)
Frame = +3
Query: 288 KDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPG 467
+D FF+ HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMKVG+AIKPG
Sbjct: 63 QDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG 122
Query: 468 TPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPST 647
T V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LDIEVDGGVGP T
Sbjct: 123 TSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDT 182
Query: 648 INCCANAGA 674
++ CA AGA
Sbjct: 183 VHKCAEAGA 191
Score = 80.2 bits (189), Expect = 6e-15
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSE 268
IGPSILN+DL+ L E ++LD+GADYLHLDVMDG FVPN+TFGHP E
Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVE 55
>BC005148-1|AAH05148.2| 228|Homo sapiens
ribulose-5-phosphate-3-epimerase protein.
Length = 228
Score = 174 bits (424), Expect = 2e-43
Identities = 78/129 (60%), Positives = 98/129 (75%)
Frame = +3
Query: 288 KDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPG 467
+D FF+ HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMKVG+AIKPG
Sbjct: 63 QDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG 122
Query: 468 TPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPST 647
T V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LDIEVDGGVGP T
Sbjct: 123 TSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDT 182
Query: 648 INCCANAGA 674
++ CA AGA
Sbjct: 183 VHKCAEAGA 191
Score = 80.2 bits (189), Expect = 6e-15
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSE 268
IGPSILN+DL+ L E ++LD+GADYLHLDVMDG FVPN+TFGHP E
Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVE 55
>AJ224326-1|CAA11895.1| 174|Homo sapiens
ribulose-5-phosphate-epimerase protein.
Length = 174
Score = 174 bits (424), Expect = 2e-43
Identities = 78/129 (60%), Positives = 98/129 (75%)
Frame = +3
Query: 288 KDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPG 467
+D FF+ HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMKVG+AIKPG
Sbjct: 9 QDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG 68
Query: 468 TPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPST 647
T V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LDIEVDGGVGP T
Sbjct: 69 TSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDT 128
Query: 648 INCCANAGA 674
++ CA AGA
Sbjct: 129 VHKCAEAGA 137
>DQ120706-1|ABC40667.1| 228|Homo sapiens rcRPE protein.
Length = 228
Score = 162 bits (393), Expect = 1e-39
Identities = 74/129 (57%), Positives = 94/129 (72%)
Frame = +3
Query: 288 KDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPG 467
+D FF+ HMMV KPEQW+ PMA A NQYTFH+E ++ + + +RE+GMKVG+AIKPG
Sbjct: 63 QDPFFDMHMMVSKPEQWVKPMAVAEANQYTFHLEATENPGTLIKDIRENGMKVGLAIKPG 122
Query: 468 TPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPST 647
T V + + + DM L+MTVEPGFG QKFME+ M KV +LR +P LDIE DGGVG T
Sbjct: 123 TSVEYLAPWANQIDMALVMTVEPGFGEQKFMEDMMPKVHWLRTQFPSLDIEGDGGVGSDT 182
Query: 648 INCCANAGA 674
++ CA AGA
Sbjct: 183 VHKCAEAGA 191
Score = 78.2 bits (184), Expect = 2e-14
Identities = 34/49 (69%), Positives = 41/49 (83%)
Frame = +2
Query: 122 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSE 268
IGPSILN+DL+ L + ++LD+GADYLHLDVMDG FVPN+TFGHP E
Sbjct: 7 IGPSILNSDLANLGAKCLQMLDSGADYLHLDVMDGHFVPNITFGHPVVE 55
>AK056028-1|BAB71076.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ31466 fis, clone NT2NE2001372, highly similar to
Homo sapiens mRNA for putative
ribulose-5-phosphate-epimerase. ).
Length = 178
Score = 149 bits (360), Expect = 1e-35
Identities = 75/140 (53%), Positives = 93/140 (66%), Gaps = 18/140 (12%)
Frame = +3
Query: 309 HMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMK--------------- 443
HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMK
Sbjct: 2 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQG 61
Query: 444 ---VGVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD 614
VG+AIKPGT V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LD
Sbjct: 62 PLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD 121
Query: 615 IEVDGGVGPSTINCCANAGA 674
IEVDGGVGP T++ CA AGA
Sbjct: 122 IEVDGGVGPDTVHKCAEAGA 141
>AC007038-1|AAX93087.1| 178|Homo sapiens unknown protein.
Length = 178
Score = 149 bits (360), Expect = 1e-35
Identities = 75/140 (53%), Positives = 93/140 (66%), Gaps = 18/140 (12%)
Frame = +3
Query: 309 HMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMK--------------- 443
HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMK
Sbjct: 2 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQG 61
Query: 444 ---VGVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD 614
VG+AIKPGT V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LD
Sbjct: 62 PLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD 121
Query: 615 IEVDGGVGPSTINCCANAGA 674
IEVDGGVGP T++ CA AGA
Sbjct: 122 IEVDGGVGPDTVHKCAEAGA 141
>AK093658-1|BAC04212.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ36339 fis, clone THYMU2006365, highly similar to
Homo sapiens mRNA for putative
ribulose-5-phosphate-epimerase. ).
Length = 178
Score = 144 bits (350), Expect = 2e-34
Identities = 74/140 (52%), Positives = 92/140 (65%), Gaps = 18/140 (12%)
Frame = +3
Query: 309 HMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMK--------------- 443
HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMK
Sbjct: 2 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQG 61
Query: 444 ---VGVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD 614
VG+AIKPGT V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LD
Sbjct: 62 PLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD 121
Query: 615 IEVDGGVGPSTINCCANAGA 674
IEVDGGVG T++ CA AGA
Sbjct: 122 IEVDGGVGLDTVHKCAEAGA 141
>EF102434-1|ABK97618.1| 375|Homo sapiens killer-cell Ig-like
receptor 2DL5 protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 44 GNSKX*NSSVXKIXSKTKMTRHLKALIGPSI 136
GNS +SS + SKT + RHL LIG S+
Sbjct: 217 GNSSSSSSSPTEPSSKTGIRRHLHILIGTSV 247
>DQ371554-1|ABD38574.1| 375|Homo sapiens killer Ig receptor
protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 44 GNSKX*NSSVXKIXSKTKMTRHLKALIGPSI 136
GNS +SS + SKT + RHL LIG S+
Sbjct: 217 GNSSSSSSSPTEPSSKTGIRRHLHILIGTSV 247
>AL133414-13|CAC40714.1| 375|Homo sapiens 1060P11.6 (killer cell
immunoglobulin-like receptor, two domains, long cytoplas
protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 44 GNSKX*NSSVXKIXSKTKMTRHLKALIGPSI 136
GNS +SS + SKT + RHL LIG S+
Sbjct: 217 GNSSSSSSSPTEPSSKTGIRRHLHILIGTSV 247
>AJ632294-1|CAG15143.2| 375|Homo sapiens killer-cell Ig like
receptor protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 44 GNSKX*NSSVXKIXSKTKMTRHLKALIGPSI 136
GNS +SS + SKT + RHL LIG S+
Sbjct: 217 GNSSSSSSSPTEPSSKTGIRRHLHILIGTSV 247
>AJ544587-1|CAD67580.1| 375|Homo sapiens killer-cell Ig-like
receptor protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 44 GNSKX*NSSVXKIXSKTKMTRHLKALIGPSI 136
GNS +SS + SKT + RHL LIG S+
Sbjct: 217 GNSSSSSSSPTEPSSKTGIRRHLHILIGTSV 247
>AF272157-1|AAG44797.1| 375|Homo sapiens killer cell
immunoglobulin-like receptor precursor protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 44 GNSKX*NSSVXKIXSKTKMTRHLKALIGPSI 136
GNS +SS + SKT + RHL LIG S+
Sbjct: 217 GNSSSSSSSPTEPSSKTGIRRHLHILIGTSV 247
>AF271608-1|AAG44778.1| 375|Homo sapiens killer cell
immunoglobulin-like receptor KIR2DLX protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 44 GNSKX*NSSVXKIXSKTKMTRHLKALIGPSI 136
GNS +SS + SKT + RHL LIG S+
Sbjct: 217 GNSSSSSSSPTEPSSKTGIRRHLHILIGTSV 247
>AF271607-1|AAG44777.1| 375|Homo sapiens killer cell
immunoglobulin-like receptor KIR2DLX protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 44 GNSKX*NSSVXKIXSKTKMTRHLKALIGPSI 136
GNS +SS + SKT + RHL LIG S+
Sbjct: 217 GNSSSSSSSPTEPSSKTGIRRHLHILIGTSV 247
>AF217487-1|AAG37101.1| 375|Homo sapiens killer cell Ig-like
receptor KIR2DL5.3 protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 44 GNSKX*NSSVXKIXSKTKMTRHLKALIGPSI 136
GNS +SS + SKT + RHL LIG S+
Sbjct: 217 GNSSSSSSSPTEPSSKTGIRRHLHILIGTSV 247
>AF217485-1|AAG40152.1| 375|Homo sapiens killer cell Ig-like
receptor KIR2DL5.1 protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 44 GNSKX*NSSVXKIXSKTKMTRHLKALIGPSI 136
GNS +SS + SKT + RHL LIG S+
Sbjct: 217 GNSSSSSSSPTEPSSKTGIRRHLHILIGTSV 247
>AF204903-1|AAF72845.1| 375|Homo sapiens killer-cell
immunoglobulin-like receptor KIR2DL5.1 protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 44 GNSKX*NSSVXKIXSKTKMTRHLKALIGPSI 136
GNS +SS + SKT + RHL LIG S+
Sbjct: 217 GNSSSSSSSPTEPSSKTGIRRHLHILIGTSV 247
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,024,921
Number of Sequences: 237096
Number of extensions: 1824960
Number of successful extensions: 3250
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3247
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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