Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_N16
         (675 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061110-1|AAL28658.1|  221|Drosophila melanogaster LD09559p pro...   226   2e-59
AE013599-451|AAM71098.1|  221|Drosophila melanogaster CG30499-PA...   226   2e-59
AY118788-1|AAM50648.1|  189|Drosophila melanogaster GH15296p pro...    29   4.4  
AF014951-1|AAB67804.1|  185|Drosophila melanogaster calcium-bind...    29   4.4  
AF189221-1|AAF61856.1|  743|Drosophila melanogaster HERC2 protein.     29   7.7  

>AY061110-1|AAL28658.1|  221|Drosophila melanogaster LD09559p
           protein.
          Length = 221

 Score =  226 bits (552), Expect = 2e-59
 Identities = 101/136 (74%), Positives = 118/136 (86%)
 Frame = +3

Query: 267 KCLRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKV 446
           K LR KIK AFFETHMMV+ PEQWI PMADAGVN YTFH+EPV+DV+ V R+V+E GMKV
Sbjct: 55  KSLRNKIKTAFFETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRRVQESGMKV 114

Query: 447 GVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVD 626
           G+AIKPGT V ++EKY+SI+D+VL+MTVEPGFGGQ FM + M KV++LRENYP LDIEVD
Sbjct: 115 GLAIKPGTEVQDLEKYLSIADVVLVMTVEPGFGGQSFMADMMPKVKWLRENYPNLDIEVD 174

Query: 627 GGVGPSTINCCANAGA 674
           GGVGP TI+CCA AGA
Sbjct: 175 GGVGPKTIHCCAEAGA 190



 Score = 94.7 bits (225), Expect = 1e-19
 Identities = 47/60 (78%), Positives = 50/60 (83%)
 Frame = +2

Query: 110 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSEVPSRKNK 289
           ++A IGPSILNADLS L  ESQKLLDNGADYLHLDVMDG FVPNLTFGHP   V S +NK
Sbjct: 3   VQAKIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPM--VKSLRNK 60


>AE013599-451|AAM71098.1|  221|Drosophila melanogaster CG30499-PA
           protein.
          Length = 221

 Score =  226 bits (552), Expect = 2e-59
 Identities = 101/136 (74%), Positives = 118/136 (86%)
 Frame = +3

Query: 267 KCLRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKV 446
           K LR KIK AFFETHMMV+ PEQWI PMADAGVN YTFH+EPV+DV+ V R+V+E GMKV
Sbjct: 55  KSLRNKIKTAFFETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRRVQESGMKV 114

Query: 447 GVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVD 626
           G+AIKPGT V ++EKY+SI+D+VL+MTVEPGFGGQ FM + M KV++LRENYP LDIEVD
Sbjct: 115 GLAIKPGTEVQDLEKYLSIADVVLVMTVEPGFGGQSFMADMMPKVKWLRENYPNLDIEVD 174

Query: 627 GGVGPSTINCCANAGA 674
           GGVGP TI+CCA AGA
Sbjct: 175 GGVGPKTIHCCAEAGA 190



 Score = 94.7 bits (225), Expect = 1e-19
 Identities = 47/60 (78%), Positives = 50/60 (83%)
 Frame = +2

Query: 110 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSEVPSRKNK 289
           ++A IGPSILNADLS L  ESQKLLDNGADYLHLDVMDG FVPNLTFGHP   V S +NK
Sbjct: 3   VQAKIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPM--VKSLRNK 60


>AY118788-1|AAM50648.1|  189|Drosophila melanogaster GH15296p
           protein.
          Length = 189

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +3

Query: 474 VSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVG 638
           +++ +K   IS+      V+    G+K+ E   A   ++  N+ LLDI+ DG VG
Sbjct: 68  IADDDKDGKISNQEFKDAVKKTCVGKKYEEFPQAMRAFIESNFKLLDIDSDGIVG 122


>AF014951-1|AAB67804.1|  185|Drosophila melanogaster calcium-binding
           protein protein.
          Length = 185

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +3

Query: 474 VSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVG 638
           +++ +K   IS+      V+    G+K+ E   A   ++  N+ LLDI+ DG VG
Sbjct: 64  IADDDKDGKISNQEFKDAVKKTCVGKKYEEFPQAMRAFIESNFKLLDIDSDGIVG 118


>AF189221-1|AAF61856.1|  743|Drosophila melanogaster HERC2 protein.
          Length = 743

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +3

Query: 354 DAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVS 479
           +AG N+  F ++P    +      R  G+ +G+A++ G+P+S
Sbjct: 430 EAGANRDCFLLDPTLSSVLQMNMFRFLGVLMGIAVRTGSPLS 471


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,768,270
Number of Sequences: 53049
Number of extensions: 527360
Number of successful extensions: 1086
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)