Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_N14
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    27   0.13 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   6.4  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +2

Query: 26  TIRSYNCLPAWYLQRFTLXKIIILNNYTKFDHVISAVVFLY**LLSVNYTKCSELGSINS 205
           T  S  CL AW++       I+ +  Y   ++V  ++VF+   L+         LGSI  
Sbjct: 185 TRASLICLLAWFIAALFTSPILAITQYGPEEYVDGSIVFVCFSLVEDTLPCVFFLGSILI 244

Query: 206 FF 211
           FF
Sbjct: 245 FF 246


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 629 TTVSLCAYIFLVSVILVYQL 570
           T   LC Y+FL+  + +Y L
Sbjct: 287 TVTFLCLYLFLIITLTIYGL 306


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 712 CVPTSVCAWTQPRN 753
           C P + C+WT  R+
Sbjct: 143 CYPLTYCSWTSRRS 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,251
Number of Sequences: 336
Number of extensions: 3379
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)