Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_N14
         (782 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1129 + 9326975-9327071,9327174-9327306,9327408-9327479,932...    31   0.78 
11_04_0169 + 14397380-14397652,14398317-14398874,14399593-143998...    30   2.4  
04_01_0150 + 1741639-1741742,1742432-1742543,1742856-1743594,174...    29   4.2  
02_05_0609 - 30335054-30335374,30335491-30335870,30336102-303364...    28   7.3  
01_01_0498 - 3666752-3667072,3667670-3668061,3668571-3668912,366...    28   9.6  

>06_01_1129 +
           9326975-9327071,9327174-9327306,9327408-9327479,
           9327593-9327736,9327950-9328021,9328219-9328278,
           9328384-9328637,9329940-9330281,9332001-9332380,
           9333867-9334235
          Length = 640

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -3

Query: 594 LSNSSLSAPIPETNARSSTLLKRPIIC 514
           LS ++LS PIPE+ AR+  ++  P+IC
Sbjct: 175 LSYNNLSGPIPESLARTYNIVGNPLIC 201


>11_04_0169 +
           14397380-14397652,14398317-14398874,14399593-14399823,
           14399924-14400064,14401051-14401248,14401319-14401591,
           14401959-14401976
          Length = 563

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/55 (29%), Positives = 22/55 (40%)
 Frame = +2

Query: 605 CTHTRKQLSRASSCAHSLDSIRLPSESRLCSINSSSVFQLQCVPGLNQEIAANIV 769
           C H     S +S  + S  S   PS S  CS +    F++ C        AA +V
Sbjct: 13  CPHAHHHHSTSSLPSSSSSSTSAPSSSSRCSFSRGGPFRVHCAVTATTSAAAPVV 67


>04_01_0150 +
           1741639-1741742,1742432-1742543,1742856-1743594,
           1743724-1743776,1743914-1743991,1744107-1744405,
           1744660-1745476,1745576-1745842,1745987-1746181,
           1746287-1746372,1746469-1746657,1747138-1747207,
           1747399-1747552,1747706-1747832,1749158-1749254
          Length = 1128

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 413 EYPELMNINAATEEQLMTLPGVNRQLAREIVRHRQMI 523
           EY +++++   TEEQL +LP  N +  R I RH + I
Sbjct: 350 EYDQIVHVPKLTEEQLRSLPVENAEKLRRI-RHVKKI 385


>02_05_0609 -
           30335054-30335374,30335491-30335870,30336102-30336443,
           30336551-30336700,30336781-30336878,30336986-30337045,
           30337140-30337211,30337337-30337480,30337584-30337655,
           30337767-30337899,30338076-30338181
          Length = 625

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 594 LSNSSLSAPIPETNARSSTLLKRPIIC 514
           LS ++LS P+P + AR+  ++  P+IC
Sbjct: 178 LSYNNLSGPVPGSLARTFNIVGNPLIC 204


>01_01_0498 -
           3666752-3667072,3667670-3668061,3668571-3668912,
           3669982-3670131,3670211-3670308,3670430-3670489,
           3670605-3670676,3670766-3670909,3671003-3671074,
           3671170-3671302,3671649-3671751
          Length = 628

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = -3

Query: 594 LSNSSLSAPIPETNARSSTLLKRPIIC 514
           LS ++LS P+P+ ++R+  ++  P+IC
Sbjct: 177 LSFNNLSGPLPKISSRTFNIVGNPMIC 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,090,684
Number of Sequences: 37544
Number of extensions: 359990
Number of successful extensions: 1005
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)