Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_N13
         (757 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4AGM6 Cluster: Cytochrome c biogenesis protein, transm...    35   2.5  
UniRef50_Q552R0 Cluster: Putative uncharacterized protein; n=2; ...    34   3.3  
UniRef50_Q4UAE0 Cluster: Putative uncharacterized protein; n=2; ...    34   3.3  
UniRef50_Q3A3L7 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q26F50 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q8I3G3 Cluster: Putative uncharacterized protein PFE152...    33   5.8  
UniRef50_A5K2P9 Cluster: Putative uncharacterized protein; n=2; ...    33   5.8  
UniRef50_Q11U78 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  

>UniRef50_Q4AGM6 Cluster: Cytochrome c biogenesis protein,
           transmembrane region; n=5; Bacteroidetes/Chlorobi
           group|Rep: Cytochrome c biogenesis protein,
           transmembrane region - Chlorobium phaeobacteroides BS1
          Length = 232

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
 Frame = +1

Query: 259 GIMIFGYLNLLFAGFICGAYIHYLNKNAENVTMISDVIII---YKGVGFFAHVWLTFFLY 429
           G++ FG L  +  G   G Y+ ++   A  + +I    ++     GVG F H    F L+
Sbjct: 151 GVLYFGMLIPMTIGSASGLYLPFIFAVATGIPVIIFAYLLAFTLSGVGSFYHKMKAFELW 210

Query: 430 FVEVIFCGILLVGVH 474
           F  VI    ++VG++
Sbjct: 211 FRRVISVVFIIVGIY 225


>UniRef50_Q552R0 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 477

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = +1

Query: 268 IFGYLNLLFAGFICGAYIHYLNK--NAENVTMISDVIIIYKGVGFFAHVWLTFFLYFVEV 441
           + G LNL    FICG Y  YL    + E + + +  II+YK      H +L  F YF  +
Sbjct: 108 VLGVLNLCVISFICGKYPLYLQYFFSGEYLVLFATRIILYKRKKL--HYFLFDFCYFANL 165

Query: 442 IFCGILLVGVHMKRPFLIQLF 504
           +     + G+  ++ + I  F
Sbjct: 166 MLL-FFIYGLPDRQWYFITCF 185


>UniRef50_Q4UAE0 Cluster: Putative uncharacterized protein; n=2;
           Aconoidasida|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 479

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
 Frame = +1

Query: 223 LTRCCFFVPLRYGIMIFGYLNLLFAGFICGAYIHYLNKNAENVTMISDVIIIYKGVGFFA 402
           LT+   F+PLR+ I+   Y+      F C  + H++         ++  I+I   +  F 
Sbjct: 193 LTKVAAFLPLRFPILFLIYIVYFIGLFTCQFFFHHIQALRYITMQVTSQIVIGIDLILFN 252

Query: 403 HVWLTFFLYFVEVIFCGILLV-GVHM 477
             ++ F ++ + +++    +V G H+
Sbjct: 253 LFFIDFIIFMIYILYIIYQIVYGFHI 278


>UniRef50_Q3A3L7 Cluster: Putative uncharacterized protein; n=1;
           Pelobacter carbinolicus DSM 2380|Rep: Putative
           uncharacterized protein - Pelobacter carbinolicus
           (strain DSM 2380 / Gra Bd 1)
          Length = 458

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 20/68 (29%), Positives = 29/68 (42%)
 Frame = +1

Query: 298 GFICGAYIHYLNKNAENVTMISDVIIIYKGVGFFAHVWLTFFLYFVEVIFCGILLVGVHM 477
           GFIC      +    E    I  +I IY G+G  +      FL  + VI C IL+ G   
Sbjct: 169 GFIC-MLSRLVVARKEEAKYIWAIIFIYSGLGLLSGQRAACFLPIIAVIICSILIEGQFK 227

Query: 478 KRPFLIQL 501
            +  ++ L
Sbjct: 228 PKKLILNL 235


>UniRef50_Q26F50 Cluster: Putative uncharacterized protein; n=1;
           Flavobacteria bacterium BBFL7|Rep: Putative
           uncharacterized protein - Flavobacteria bacterium BBFL7
          Length = 252

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 552 NRYFNKYSYAIHSFGLCYYILWICDTNIF 638
           NRYFNK  Y ++ F    YI+W+ D   F
Sbjct: 44  NRYFNKIRYILYYFDFFDYIIWLDDDAFF 72


>UniRef50_Q8I3G3 Cluster: Putative uncharacterized protein PFE1525w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFE1525w - Plasmodium falciparum
           (isolate 3D7)
          Length = 970

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
 Frame = +1

Query: 277 YLNLLFAGFICGAYIHYLN---------KNAENVTMISDVIIIYKGVGFFAHVWLTFFLY 429
           Y++ LF  FI   ++H+LN         KN EN   +  VI     + FF  +++ FFL+
Sbjct: 280 YIHNLFYDFIKLLFLHFLNLLPIKCFIKKNIENDKKVH-VISQIDWIQFFVGIYI-FFLF 337

Query: 430 FVEVIFCGILLVGVHMKRPF 489
           F+  I C ++ + V  K  +
Sbjct: 338 FLFTIICNVIYLYVMKKMTY 357


>UniRef50_A5K2P9 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 3404

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
 Frame = +1

Query: 280  LNL--LFAGFICGAYIHYLNKNAENVTMISDVII--IYKGVGFFAHVWLT-FFLYFVEVI 444
            LNL  L+  F+C  Y +YL    +N  ++ +++   I K +   A+  LT F L F+ ++
Sbjct: 2917 LNLINLYINFMCSFYFYYLTFYEDNYNILKNILFLGIDKVLQKKANKKLTSFVLSFMYIL 2976

Query: 445  FCGILLVGVHMKRPFLIQL 501
             C  LL+ V +K  F++ L
Sbjct: 2977 IC--LLLKVKVKEEFILTL 2993


>UniRef50_Q11U78 Cluster: Putative uncharacterized protein; n=1;
           Cytophaga hutchinsonii ATCC 33406|Rep: Putative
           uncharacterized protein - Cytophaga hutchinsonii (strain
           ATCC 33406 / NCIMB 9469)
          Length = 564

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 18/63 (28%), Positives = 33/63 (52%)
 Frame = +1

Query: 271 FGYLNLLFAGFICGAYIHYLNKNAENVTMISDVIIIYKGVGFFAHVWLTFFLYFVEVIFC 450
           FG ++++   F+ G Y  +L   A++ + +  + ++     F A+  L FFLYF E +  
Sbjct: 448 FG-IHVVLLVFLTGIYFSFLEPKAKHFSSLKTIFVLVSNATF-AYAPLFFFLYFYEYMEV 505

Query: 451 GIL 459
           G L
Sbjct: 506 GKL 508


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,833,881
Number of Sequences: 1657284
Number of extensions: 12182109
Number of successful extensions: 28647
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28628
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)